Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g00902 ATGGAAGAAGGAAGGGAGGCGATCGAGAAAGAAGGGCTGATGATGATAAACCTAGATTTCCCCCAATCTCAACACCTGCTTTCCACCCTCCGCCGTGAACGGCGACTGTTCCGCTGTCCCTCCGCCGCTAGCGACGCCCTCGCCGACGCTATTCTGCCGGCGGCCAAGATTCTGTCGAACGCCGATTCCTCTTTGCCCCATTTCTCCGGCACCATCACTTTCCCGGCCACCTCTTCACGGTGCCTCTTCAGCCGCTCTCGAACACCAAAACAGCCCTTCAATTTCTCAGCCCCAACACCGCCGCTAGAATCTCCGGTCGACCCACCAGCGGGGGATGGTGCAGGAGCCGTAGCGCTTGCTCCGACGGAAAGAGAGTCATCGGCATCAGAGGAATTTGGGGGAATCGTGGCGATCATGACGCACTATGTATGTAAGCTAGTCGAGAATGTAAATGTTCACGAATGTTTAATACTGGATTCAAATGTAGAATTTAGAAGGAGAGAACAAGAAGATCATCAAAAACTCAGAAGAAGAAGAGGAAGAAACCAATGGTTTGAAGAAGGAATTTTTGGAATGGAGAGCCAAAGAATACTTGAAGAAACTTGTTCTGTTTATGAAATCAACAACAATATTAATCTTTCTTCAACTTTGATCAATAATCATGATGGGCAATCTTTTGACTTTGGAGAATTGGAACAAGCAATTGTGCTACAAGGACTCGGCGCGATGAATAAACTCGATCATTACGAACCTAAACAAAGCTTTTTGTCAGGGAAGCCTGCAGCAACACTGGAAATGTTCCCTTCTTGGCCAATCAAATACCAACAAACTTCAAGAGGAATTAGTTTGAGAAAAAGAGAAGAGATGCTGAGAGGATCAGGTAATTATAATAACAGTAATGAAGAAAAGGAAATGGAAATATTGGGTGAAGATGAAGAAGATGAAGAAGAAAGTGAAATGAGTAATTGTTCAGCTCCTCAACAACAACAACATGAACATAACTATAACACCTCCTGCTTTAATATTATCAACAATATTCAACCTCATCAAGTTCTTATGGTCTCTACTGATGTTTCAACAACTGCACTTTCATCTCAACATCAGTACTCTCTTCAACAAAAGAGAAAAGGATGTGGTTCAATTTCAACATCACAGAAACAACTTGACGCTAAGACATTGAGACGTTTAGTTCAAAACAGAGAGGCAGCGAGGAAGAGTCGACTAAGGAAGAAGGCTTACGTACAGCAACTTGAGAGTAGTAGAATTAAGCTTACACAGCTTGAGCAAGACTTTCAACGTGCACGTTCTCAGGGTATTGGCGGCGGTGGCAATGGCAATGGCAATGTCAACCACGGGGGTAGTGCAATGTGGTTCGATATGGAATATGTGAGGTGGTTGGAAGAGGAGCATCGACACACAATGGAGTTGCGTGGGGGATTAGAGGCACATTTACCAGACACAGAGTTGAAAGTGAGGGTTGATGCGTGCATTTATCATTACGATCAAATTTTTCGATTGAAAGGCGAGGCTGCTAAGTTTGACATCTTCCATCTCATCACTGGGATGTGGATGTCTCCTGCTGAGCGTTGTTTCCTTTGGATTGGTGGATTTCGACCTTCTGATCTCATCAAGATGTTAATGTCACAATTGGATCCAATAACAGAACAACAAGTGATGGAAATTTATAAACTACAAAATTCCTCACAACAGGCTGAAGATGCTTTATCTCAAGGCCTTGATCAGCTCCATCAGTCTTTGACCGACACCGTCGCCGGCGGTCCGATCGTCGATGGAGGAATCAACCACATGGTTTTGGCCATGGACAAGCTCTCTAGTCTCCATGGCTTTCTCCATCAGACCATAAAACTTTCACTCTCATAG 1881 44.44 MEEGREAIEKEGLMMINLDFPQSQHLLSTLRRERRLFRCPSAASDALADAILPAAKILSNADSSLPHFSGTITFPATSSRCLFSRSRTPKQPFNFSAPTPPLESPVDPPAGDGAGAVALAPTERESSASEEFGGIVAIMTHYVCKLVENVNVHECLILDSNVEFRRREQEDHQKLRRRRGRNQWFEEGIFGMESQRILEETCSVYEINNNINLSSTLINNHDGQSFDFGELEQAIVLQGLGAMNKLDHYEPKQSFLSGKPAATLEMFPSWPIKYQQTSRGISLRKREEMLRGSGNYNNSNEEKEMEILGEDEEDEEESEMSNCSAPQQQQHEHNYNTSCFNIINNIQPHQVLMVSTDVSTTALSSQHQYSLQQKRKGCGSISTSQKQLDAKTLRRLVQNREAARKSRLRKKAYVQQLESSRIKLTQLEQDFQRARSQGIGGGGNGNGNVNHGGSAMWFDMEYVRWLEEEHRHTMELRGGLEAHLPDTELKVRVDACIYHYDQIFRLKGEAAKFDIFHLITGMWMSPAERCFLWIGGFRPSDLIKMLMSQLDPITEQQVMEIYKLQNSSQQAEDALSQGLDQLHQSLTDTVAGGPIVDGGINHMVLAMDKLSSLHGFLHQTIKLSLS* 627
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 12421869 12439547 - Chy11G194820.1 Chy11g00902 236663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g00902 626 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 389 433 IPR004827 GO:0003700|GO:0006355
Chy11g00902 626 PANTHER TRANSCRIPTION FACTOR TGA9 252 619 - -
Chy11g00902 626 Coils Coil 410 437 - -
Chy11g00902 626 Pfam Seed dormancy control 473 548 IPR025422 GO:0006351|GO:0043565
Chy11g00902 626 Gene3D - 390 438 - -
Chy11g00902 626 ProSiteProfiles DOG1 domain profile. 455 626 IPR025422 GO:0006351|GO:0043565
Chy11g00902 626 MobiDBLite consensus disorder prediction 90 116 - -
Chy11g00902 626 MobiDBLite consensus disorder prediction 305 320 - -
Chy11g00902 626 MobiDBLite consensus disorder prediction 292 330 - -
Chy11g00902 626 SUPERFAMILY Leucine zipper domain 391 431 IPR046347 GO:0003700|GO:0006355
Chy11g00902 626 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 394 409 IPR004827 GO:0003700|GO:0006355
Chy11g00902 626 PANTHER TRANSCRIPTION FACTOR TGA9 252 619 - -
Chy11g00902 626 Pfam bZIP transcription factor 390 425 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy10g01378 Chy-Chr10:17993986 Chy11g00902 Chy-Chr11:12421869 1.23E-91 dispersed
Chy11g00902 Chy-Chr11:12421869 Chy04g02267 Chy-Chr4:27307148 1.45E-13 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18720 PF14144 DOG1 3.50E-27 No_clan Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g00902 K14431 - csv:101223216 781.171