Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy11g00908 | ATGGCTGAAGAACATAGATGCCAAGCGCCGAAGCTTTGTGCGAACAACTGCGGGTTCTTTGGCAGTCCCGCGACAAGAGATTTCTGTTCTAAATGTTACCGAGATCTGCAGTTGAAGGAACAACAATCCTCCACCGCTAAACTCGCCTTAAACCAAACCCTGGCGGCGTCGTTGTTGTTAAATCCGGAACCGGAAGCGAAGGAACAACGCGCGGAGGAGGAGGTGAGGACGGAAGTGGTTCGGACGGCAGCGGCGGAGGAAAGACAGCAACAGCAGCCGAGCCGATGTATGACGTGCAGGCGGCGCGTGGGGTTGACGGGGTTCAAGTGCCGGTGTGGGATGGTGTATTGTGGGAGTCATCGGTACCCGGAACAACACGGGTGTGAATTTGACTTCAAGCAGATGGGGAAGGATCAGATCGCGAAGGCGAATCCGGTGGTGAAAGGGGAGAAACTGCAGAAGATTTGA | 468 | 54.91 | MAEEHRCQAPKLCANNCGFFGSPATRDFCSKCYRDLQLKEQQSSTAKLALNQTLAASLLLNPEPEAKEQRAEEEVRTEVVRTAAAEERQQQQPSRCMTCRRRVGLTGFKCRCGMVYCGSHRYPEQHGCEFDFKQMGKDQIAKANPVVKGEKLQKI* | 156 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 12490506 | 12490973 | - | Chy11G194880.1 | Chy11g00908 | 236669 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy11g00908 | 155 | Gene3D | - | 1 | 55 | - | - | |
Chy11g00908 | 155 | ProSiteProfiles | Zinc finger A20-type profile. | 7 | 41 | IPR002653 | GO:0003677|GO:0008270 | |
Chy11g00908 | 155 | PANTHER | AN1-TYPE ZINC FINGER PROTEIN | 1 | 155 | - | - | |
Chy11g00908 | 155 | PANTHER | ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 3 | 1 | 155 | - | - | |
Chy11g00908 | 155 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 12 | 51 | - | - | |
Chy11g00908 | 155 | Pfam | A20-like zinc finger | 12 | 34 | IPR002653 | GO:0003677|GO:0008270 | |
Chy11g00908 | 155 | Pfam | AN1-like Zinc finger | 96 | 132 | IPR000058 | GO:0008270 | |
Chy11g00908 | 155 | SUPERFAMILY | AN1-like Zinc finger | 83 | 150 | IPR035896 | - | |
Chy11g00908 | 155 | SMART | AN1_Zf_4 | 96 | 133 | IPR000058 | GO:0008270 | |
Chy11g00908 | 155 | Gene3D | - | 68 | 151 | IPR035896 | - | |
Chy11g00908 | 155 | SMART | A20_3 | 10 | 34 | IPR002653 | GO:0003677|GO:0008270 | |
Chy11g00908 | 155 | ProSiteProfiles | Zinc finger AN1-type profile. | 90 | 136 | IPR000058 | GO:0008270 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy02g01445 | Chy-Chr2:11531479 | Chy11g00908 | Chy-Chr11:12490506 | 1.04E-43 | dispersed | |
Chy08g00932 | Chy-Chr8:16718825 | Chy11g00908 | Chy-Chr11:12490506 | 1.01E-58 | dispersed | |
Chy09g01148 | Chy-Chr9:13743517 | Chy11g00908 | Chy-Chr11:12490506 | 1.06E-43 | dispersed | |
Chy11g00908 | Chy-Chr11:12490506 | Chy01g01877 | Chy-Chr1:24151199 | 8.97E-45 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy11g00908 | - | - | csv:101219115 | 278.87 |