Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g00919 ATGGAGGATCAGCGAGATGATGTTGCACCATCAGAGCAAGCCCCATCCCATGCTTCTTCTTGGTGGTCTTCTGATTTTGAGGAGAAATTTGGATCTGTTTCTTTGGGCCCTCGGGAAGATATTGTAAATGAAAAGGAAGAGATCATCAATTCTGACCAAGATGTGTTGTTCTCGCCTCAGAGAGCATCTCAAATTCTCAGGCGTACTGGAATGCTTTGTGAACCTATTCCAGATGGGTTCTATTCTGTTATTCTGGATAAAAGGCTAAAAGAGCGGTTTCACAGCATTCCTTCCCTGGACGAGCTTCGTGCTTTGGAGGCGGAAGGTTACAGGAATGATGTTATTCTTGTGGAGACAGAGAAAGATAAAAAGCTTTCTATGCTGAAGCAACTGATCTTGACACTGGTTAAAGGATTGAATTCAAATCCAGCTGCAATTATCAAGAAGATTGCTGGACTGGTTTCTGATTTCTATAAACGACCAATTTTAGAAAGTCCAGCAAAAGGTGCTCTTGAAGAAACCTCACACTTGTTCGAGGATAGAGGCATTCAATTGCTTGGACAAATAAAATTTGGTTCTTGTCGTCCTAGAGCTATCTTATTTAAGGTTCTGGCAGACACCGTAGGGCTTGAAAGCCGGCTCATGGTGGGCTTGCCAAATGAGGGGGCTACTGGGTGTGTAGATTCATACAAGCATATGTCTGTGACAGTTGTGTTGAATTCTGTTGAACTAGTTGTTGATCTGATGCGGTTTCCTGGCCAGTTGTTACCTCGGTCAACTAAGGCCATTTTTATGACCCATATTTCTGCTGCTGGTGAAAGCGATTCTGCAGAAAACGACTCCTGTGATTCACCACTAGAACCTAATAGTCCTCTTTATGGTTTCTCAGAAAGAGTTGATCCTGACAGTGTCGAGAAAGATGAGAGCCTCCAATTCCACAGAAAATTTGATGCAGCTTCAAATGCACATGGTAATTCATTGCGCAACATGATGTTGCGATCAAGTACAGCACTTGACAGGAAACTGAGTTTATCACATAGTGAACCTAACATTGCAAATGCATTTTGGCGACGTAGTCGGAGAAAGGATATTGCTGAACAGCGGACTGCTAGTTCAAGTCCAGAGCATCCTTCATTTCGGGCACGTGGCCGGTCTATGCTTAGTGGGGATAGGAAAGCCTTCAGAGATTTTTCTGACGATGTCTCTACTTCAAGATCAGATGGTGCTTCAACTTCAACTTCAGAAGCACGTCGATTAAGAAGAAGGAGCATCAGCATTACTCCAGAGATTGGTGATGATATCGTGAGGGCTGTACGAGCAATGAATGAAACACTGAAGCAAAATCGTCTTTTGAGAGGACAAGAAGATGACAGGTCGTTCTCCCATCCTTCAAATGAAAGAAATAGTAGTTCAGATGTTCGGAGAAATGATCAAGTGGGTTCTCAAAGAGCAATATCATTACCATCATCGCCTCACGTGTACAGGGGTCAAACCTCTGATGGAATTGGGCATTCAGCATACGGGAATGATGAATTAACCTTTAAATGGACTAAAGTTCTTGAATCTTTCTCCTTGAATGACAAACCACTATTACCTTACCCAGAGTGGAACATCGATTACTCAGAACTGACAGTTGGTATCCGTATTGGAATTGGGTTTTTTGGAGAAGTTTTCCGTGGCATTTGGAATGGAACAGATGTCGCAATCAAAGTTTTCCTAGAACAAGATTTAACTCCTGAGAACATTGAGGACTTCTGTAATGAGATATCAATTCTTAGCCGTCTCCGACATCCTAATGTTATACTATTTCTGGGGGCATGCACAAAGCCGCCGCGCTTATCAATGATCACCGAATACATGGAAATGGGTTCCTTGTATTCCTTGATTCATTTGAGTGGTCAGAAAAAAAAACTTAGCTGGCGGAGAAGACTGAAGATGTTGCGTGACATATGCAGGGGTTTGATGTGCATACACCGAATGAAAATAGCTCATCGAGACCTAAAAAGTGCAAATTGCCTAGTGAACAAGCATTGGACCGTTAAGATATGCGATTTTGGGCTTTCAAGAATATTGACAGATGCTCCAGCTAGAGGGTCTCCATCTGCAGGAACTCCAGAATGGATGGCTCCTGAGCTCTTTCGAAACGAGCCCTTCACTGAAAAGTGTGATATCTTCAGCCTGGGGGTCATTATGTGGGAGCTATGCACACTAAACAGACCATGGGAGGGTGTCCCACCGGAGCGGGTAGTTTATGCTGTTGGCACTGAGGGGTCCCGCCTCGAGATTCCCGAAGGCCCACTTGGCAGGCTTATATCAGATTGTTGGGCAGAACCAAATGAACGGCCAAGCTGCGAAGAGATCCTCTCACGCTTGCTGGACTGCGAGTACTCACTTTCTTGA 2400 44.04 MEDQRDDVAPSEQAPSHASSWWSSDFEEKFGSVSLGPREDIVNEKEEIINSDQDVLFSPQRASQILRRTGMLCEPIPDGFYSVILDKRLKERFHSIPSLDELRALEAEGYRNDVILVETEKDKKLSMLKQLILTLVKGLNSNPAAIIKKIAGLVSDFYKRPILESPAKGALEETSHLFEDRGIQLLGQIKFGSCRPRAILFKVLADTVGLESRLMVGLPNEGATGCVDSYKHMSVTVVLNSVELVVDLMRFPGQLLPRSTKAIFMTHISAAGESDSAENDSCDSPLEPNSPLYGFSERVDPDSVEKDESLQFHRKFDAASNAHGNSLRNMMLRSSTALDRKLSLSHSEPNIANAFWRRSRRKDIAEQRTASSSPEHPSFRARGRSMLSGDRKAFRDFSDDVSTSRSDGASTSTSEARRLRRRSISITPEIGDDIVRAVRAMNETLKQNRLLRGQEDDRSFSHPSNERNSSSDVRRNDQVGSQRAISLPSSPHVYRGQTSDGIGHSAYGNDELTFKWTKVLESFSLNDKPLLPYPEWNIDYSELTVGIRIGIGFFGEVFRGIWNGTDVAIKVFLEQDLTPENIEDFCNEISILSRLRHPNVILFLGACTKPPRLSMITEYMEMGSLYSLIHLSGQKKKLSWRRRLKMLRDICRGLMCIHRMKIAHRDLKSANCLVNKHWTVKICDFGLSRILTDAPARGSPSAGTPEWMAPELFRNEPFTEKCDIFSLGVIMWELCTLNRPWEGVPPERVVYAVGTEGSRLEIPEGPLGRLISDCWAEPNERPSCEEILSRLLDCEYSLS* 800
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 12566046 12574739 - Chy11G194990.1 Chy11g00919 236680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g00919 799 ProSitePatterns Serine/Threonine protein kinases active-site signature. 662 674 IPR008271 GO:0004672|GO:0006468
Chy11g00919 799 SUPERFAMILY Protein kinase-like (PK-like) 520 791 IPR011009 -
Chy11g00919 799 MobiDBLite consensus disorder prediction 449 473 - -
Chy11g00919 799 MobiDBLite consensus disorder prediction 474 496 - -
Chy11g00919 799 Pfam Protein tyrosine and serine/threonine kinase 544 791 IPR001245 GO:0004672|GO:0006468
Chy11g00919 799 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 30 797 - -
Chy11g00919 799 ProSiteProfiles Protein kinase domain profile. 543 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy11g00919 799 CDD STKc_MAP3K-like 549 791 - -
Chy11g00919 799 MobiDBLite consensus disorder prediction 1 23 - -
Chy11g00919 799 MobiDBLite consensus disorder prediction 447 501 - -
Chy11g00919 799 PANTHER MITOGEN ACTIVATED PROTEIN KINASE KINASE KINASE-LIKE PROTEIN-RELATED 30 797 - -
Chy11g00919 799 ProSitePatterns Protein kinases ATP-binding region signature. 549 570 IPR017441 GO:0005524
Chy11g00919 799 MobiDBLite consensus disorder prediction 363 420 - -
Chy11g00919 799 Pfam Ethylene-responsive protein kinase Le-CTR1 60 255 - -
Chy11g00919 799 MobiDBLite consensus disorder prediction 385 402 - -
Chy11g00919 799 Gene3D Transferase(Phosphotransferase) domain 1 622 798 - -
Chy11g00919 799 Gene3D Phosphorylase Kinase; domain 1 536 621 - -
Chy11g00919 799 SMART serkin_6 543 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy11g00919 Chy-Chr11:12566046 Chy12g01404 Chy-Chr12:18151135 5.90E-10 dispersed
Chy11g00919 Chy-Chr11:12566046 Chy08g00913 Chy-Chr8:16570660 1.54E-74 transposed
Chy11g00919 Chy-Chr11:12566046 Chy04g01970 Chy-Chr4:25583218 1.05E-74 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71553 PF07714 PK_Tyr_Ser-Thr 4.40E-59 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g00919 - - csv:101220859 1582.39