Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy11g00919 | ATGGAGGATCAGCGAGATGATGTTGCACCATCAGAGCAAGCCCCATCCCATGCTTCTTCTTGGTGGTCTTCTGATTTTGAGGAGAAATTTGGATCTGTTTCTTTGGGCCCTCGGGAAGATATTGTAAATGAAAAGGAAGAGATCATCAATTCTGACCAAGATGTGTTGTTCTCGCCTCAGAGAGCATCTCAAATTCTCAGGCGTACTGGAATGCTTTGTGAACCTATTCCAGATGGGTTCTATTCTGTTATTCTGGATAAAAGGCTAAAAGAGCGGTTTCACAGCATTCCTTCCCTGGACGAGCTTCGTGCTTTGGAGGCGGAAGGTTACAGGAATGATGTTATTCTTGTGGAGACAGAGAAAGATAAAAAGCTTTCTATGCTGAAGCAACTGATCTTGACACTGGTTAAAGGATTGAATTCAAATCCAGCTGCAATTATCAAGAAGATTGCTGGACTGGTTTCTGATTTCTATAAACGACCAATTTTAGAAAGTCCAGCAAAAGGTGCTCTTGAAGAAACCTCACACTTGTTCGAGGATAGAGGCATTCAATTGCTTGGACAAATAAAATTTGGTTCTTGTCGTCCTAGAGCTATCTTATTTAAGGTTCTGGCAGACACCGTAGGGCTTGAAAGCCGGCTCATGGTGGGCTTGCCAAATGAGGGGGCTACTGGGTGTGTAGATTCATACAAGCATATGTCTGTGACAGTTGTGTTGAATTCTGTTGAACTAGTTGTTGATCTGATGCGGTTTCCTGGCCAGTTGTTACCTCGGTCAACTAAGGCCATTTTTATGACCCATATTTCTGCTGCTGGTGAAAGCGATTCTGCAGAAAACGACTCCTGTGATTCACCACTAGAACCTAATAGTCCTCTTTATGGTTTCTCAGAAAGAGTTGATCCTGACAGTGTCGAGAAAGATGAGAGCCTCCAATTCCACAGAAAATTTGATGCAGCTTCAAATGCACATGGTAATTCATTGCGCAACATGATGTTGCGATCAAGTACAGCACTTGACAGGAAACTGAGTTTATCACATAGTGAACCTAACATTGCAAATGCATTTTGGCGACGTAGTCGGAGAAAGGATATTGCTGAACAGCGGACTGCTAGTTCAAGTCCAGAGCATCCTTCATTTCGGGCACGTGGCCGGTCTATGCTTAGTGGGGATAGGAAAGCCTTCAGAGATTTTTCTGACGATGTCTCTACTTCAAGATCAGATGGTGCTTCAACTTCAACTTCAGAAGCACGTCGATTAAGAAGAAGGAGCATCAGCATTACTCCAGAGATTGGTGATGATATCGTGAGGGCTGTACGAGCAATGAATGAAACACTGAAGCAAAATCGTCTTTTGAGAGGACAAGAAGATGACAGGTCGTTCTCCCATCCTTCAAATGAAAGAAATAGTAGTTCAGATGTTCGGAGAAATGATCAAGTGGGTTCTCAAAGAGCAATATCATTACCATCATCGCCTCACGTGTACAGGGGTCAAACCTCTGATGGAATTGGGCATTCAGCATACGGGAATGATGAATTAACCTTTAAATGGACTAAAGTTCTTGAATCTTTCTCCTTGAATGACAAACCACTATTACCTTACCCAGAGTGGAACATCGATTACTCAGAACTGACAGTTGGTATCCGTATTGGAATTGGGTTTTTTGGAGAAGTTTTCCGTGGCATTTGGAATGGAACAGATGTCGCAATCAAAGTTTTCCTAGAACAAGATTTAACTCCTGAGAACATTGAGGACTTCTGTAATGAGATATCAATTCTTAGCCGTCTCCGACATCCTAATGTTATACTATTTCTGGGGGCATGCACAAAGCCGCCGCGCTTATCAATGATCACCGAATACATGGAAATGGGTTCCTTGTATTCCTTGATTCATTTGAGTGGTCAGAAAAAAAAACTTAGCTGGCGGAGAAGACTGAAGATGTTGCGTGACATATGCAGGGGTTTGATGTGCATACACCGAATGAAAATAGCTCATCGAGACCTAAAAAGTGCAAATTGCCTAGTGAACAAGCATTGGACCGTTAAGATATGCGATTTTGGGCTTTCAAGAATATTGACAGATGCTCCAGCTAGAGGGTCTCCATCTGCAGGAACTCCAGAATGGATGGCTCCTGAGCTCTTTCGAAACGAGCCCTTCACTGAAAAGTGTGATATCTTCAGCCTGGGGGTCATTATGTGGGAGCTATGCACACTAAACAGACCATGGGAGGGTGTCCCACCGGAGCGGGTAGTTTATGCTGTTGGCACTGAGGGGTCCCGCCTCGAGATTCCCGAAGGCCCACTTGGCAGGCTTATATCAGATTGTTGGGCAGAACCAAATGAACGGCCAAGCTGCGAAGAGATCCTCTCACGCTTGCTGGACTGCGAGTACTCACTTTCTTGA | 2400 | 44.04 | MEDQRDDVAPSEQAPSHASSWWSSDFEEKFGSVSLGPREDIVNEKEEIINSDQDVLFSPQRASQILRRTGMLCEPIPDGFYSVILDKRLKERFHSIPSLDELRALEAEGYRNDVILVETEKDKKLSMLKQLILTLVKGLNSNPAAIIKKIAGLVSDFYKRPILESPAKGALEETSHLFEDRGIQLLGQIKFGSCRPRAILFKVLADTVGLESRLMVGLPNEGATGCVDSYKHMSVTVVLNSVELVVDLMRFPGQLLPRSTKAIFMTHISAAGESDSAENDSCDSPLEPNSPLYGFSERVDPDSVEKDESLQFHRKFDAASNAHGNSLRNMMLRSSTALDRKLSLSHSEPNIANAFWRRSRRKDIAEQRTASSSPEHPSFRARGRSMLSGDRKAFRDFSDDVSTSRSDGASTSTSEARRLRRRSISITPEIGDDIVRAVRAMNETLKQNRLLRGQEDDRSFSHPSNERNSSSDVRRNDQVGSQRAISLPSSPHVYRGQTSDGIGHSAYGNDELTFKWTKVLESFSLNDKPLLPYPEWNIDYSELTVGIRIGIGFFGEVFRGIWNGTDVAIKVFLEQDLTPENIEDFCNEISILSRLRHPNVILFLGACTKPPRLSMITEYMEMGSLYSLIHLSGQKKKLSWRRRLKMLRDICRGLMCIHRMKIAHRDLKSANCLVNKHWTVKICDFGLSRILTDAPARGSPSAGTPEWMAPELFRNEPFTEKCDIFSLGVIMWELCTLNRPWEGVPPERVVYAVGTEGSRLEIPEGPLGRLISDCWAEPNERPSCEEILSRLLDCEYSLS* | 800 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 12566046 | 12574739 | - | Chy11G194990.1 | Chy11g00919 | 236680 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy11g00919 | 799 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 662 | 674 | IPR008271 | GO:0004672|GO:0006468 | |
Chy11g00919 | 799 | SUPERFAMILY | Protein kinase-like (PK-like) | 520 | 791 | IPR011009 | - | |
Chy11g00919 | 799 | MobiDBLite | consensus disorder prediction | 449 | 473 | - | - | |
Chy11g00919 | 799 | MobiDBLite | consensus disorder prediction | 474 | 496 | - | - | |
Chy11g00919 | 799 | Pfam | Protein tyrosine and serine/threonine kinase | 544 | 791 | IPR001245 | GO:0004672|GO:0006468 | |
Chy11g00919 | 799 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 30 | 797 | - | - | |
Chy11g00919 | 799 | ProSiteProfiles | Protein kinase domain profile. | 543 | 798 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy11g00919 | 799 | CDD | STKc_MAP3K-like | 549 | 791 | - | - | |
Chy11g00919 | 799 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Chy11g00919 | 799 | MobiDBLite | consensus disorder prediction | 447 | 501 | - | - | |
Chy11g00919 | 799 | PANTHER | MITOGEN ACTIVATED PROTEIN KINASE KINASE KINASE-LIKE PROTEIN-RELATED | 30 | 797 | - | - | |
Chy11g00919 | 799 | ProSitePatterns | Protein kinases ATP-binding region signature. | 549 | 570 | IPR017441 | GO:0005524 | |
Chy11g00919 | 799 | MobiDBLite | consensus disorder prediction | 363 | 420 | - | - | |
Chy11g00919 | 799 | Pfam | Ethylene-responsive protein kinase Le-CTR1 | 60 | 255 | - | - | |
Chy11g00919 | 799 | MobiDBLite | consensus disorder prediction | 385 | 402 | - | - | |
Chy11g00919 | 799 | Gene3D | Transferase(Phosphotransferase) domain 1 | 622 | 798 | - | - | |
Chy11g00919 | 799 | Gene3D | Phosphorylase Kinase; domain 1 | 536 | 621 | - | - | |
Chy11g00919 | 799 | SMART | serkin_6 | 543 | 792 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy11g00919 | Chy-Chr11:12566046 | Chy12g01404 | Chy-Chr12:18151135 | 5.90E-10 | dispersed | |
Chy11g00919 | Chy-Chr11:12566046 | Chy08g00913 | Chy-Chr8:16570660 | 1.54E-74 | transposed | |
Chy11g00919 | Chy-Chr11:12566046 | Chy04g01970 | Chy-Chr4:25583218 | 1.05E-74 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
71553 | PF07714 | PK_Tyr_Ser-Thr | 4.40E-59 | CL0016 | Chy | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy11g00919 | - | - | csv:101220859 | 1582.39 |