Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g00950 ATGAAATTTGAAGAGCAGAACCAGAATCATCATCAGTCCAAAGAGATATGCAGAACCATTCAAGTGGATACAGTTGATCACCATCACACTATTTCCTCTCTACTTGCAATGGAGGCTTCCGAATTCTGCGATAAGGATGGTGATGATGGCCTCTATATCCCTCCTCTCAACTTTTCCATGGTTGATAATGGCATTTTCCGCTCCGGTTTCCCTGACTCTCCTAACTTCTCCTTCCTCCAAACCCTAGCTCTCCGTTCCATTATATGTTTATGTCCGGAGCCGTATCCGGAACACAATATGGACTTCCTCAAGTCTAACGGGATTAGATTGTTTCAATTTGGAATCGAAAGCTGTAAGGAGCCTTTCGTGAACATCCCAGATGATATTATTCGTGAAGCACTGAAAGTTGTCCTTGACGATAGAAATCATCCACTTCTCATACATTGCAAAAGAGGAAAGCATCGGACAGGTTGTCTTGTGGGATGCCTGAGAAAATTGCAGAGGTGGTGCCTCACGTCTGTGTTCGATGAGTATCAGAGATTTGCAGCTGCGAAAGCAAGAATTTCCGACCAGAGGTTTATGGAGTTGTTTGATATCTCTGACTTGAAGCATCTTCCCATGTCATTCTCATGCTCAAAGAGACGAAAGCAGGTAGCTCAGTGGAAAAAGCAAGGCGACCACTCAATCGAAC 691 44.14 MKFEEQNQNHHQSKEICRTIQVDTVDHHHTISSLLAMEASEFCDKDGDDGLYIPPLNFSMVDNGIFRSGFPDSPNFSFLQTLALRSIICLCPEPYPEHNMDFLKSNGIRLFQFGIESCKEPFVNIPDDIIREALKVVLDDRNHPLLIHCKRGKHRTGCLVGCLRKLQRWCLTSVFDEYQRFAAAKARISDQRFMELFDISDLKHLPMSFSCSKRRKQVAQWKKQGDHSIEX 231
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 13243491 13246921 - Chy11G195300.1 Chy11g00950 236711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g00950 231 CDD PFA-DSP_Siw14 51 198 - -
Chy11g00950 231 Pfam Tyrosine phosphatase family 52 203 IPR004861 -
Chy11g00950 231 ProSitePatterns Tyrosine specific protein phosphatases active site. 147 157 IPR016130 GO:0016311|GO:0016791
Chy11g00950 231 PRINTS Plant and fungal dual specificity phosphatase signature 52 69 IPR020428 GO:0016791
Chy11g00950 231 PRINTS Plant and fungal dual specificity phosphatase signature 89 102 IPR020428 GO:0016791
Chy11g00950 231 PRINTS Plant and fungal dual specificity phosphatase signature 108 122 IPR020428 GO:0016791
Chy11g00950 231 PRINTS Plant and fungal dual specificity phosphatase signature 125 139 IPR020428 GO:0016791
Chy11g00950 231 PANTHER TYROSINE-PROTEIN PHOSPHATASE 4 212 - -
Chy11g00950 231 ProSiteProfiles Dual specificity protein phosphatase domain profile. 57 211 IPR020422 GO:0006470|GO:0008138
Chy11g00950 231 Gene3D Protein tyrosine phosphatase superfamily 52 201 IPR029021 -
Chy11g00950 231 PANTHER PHOSPHOTYROSINE PROTEIN PHOSPHATASES SUPERFAMILY PROTEIN ISOFORM 1 4 212 - -
Chy11g00950 231 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 53 199 IPR029021 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g01674 Chy-Chr2:16473349 Chy11g00950 Chy-Chr11:13243491 1.16E-79 dispersed
Chy05g00519 Chy-Chr5:5629593 Chy11g00950 Chy-Chr11:13243491 2.22E-97 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g00950 K18045 - csv:101222170 442.195