Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g00957 ATGCGGCGAGGCAGACCCTCAGATCCATTTACAGCTACAGAAATACCCAATTCAACCATTCAGCCGGAAAATCCTCTCAAAGAGATTCGTTACAGAGGCGTTCGTAAGCGTCCTTGGGGTAGGTACGCTGCTGAGATCAGAGATCCTTGGAAGAAAACTAGGGTTTGGCTTGGTACCTTTGATTCCGCTGAAGAGGCTGCTCGGGCTTATGATAATGCCGCTCGAACCCTTCGGGGTGCCAAGGCCAAAACTAACTTTCCTTTACATCCATCCACGATTTCCATTCAACAACAAATTCCTTTTTACCAATCTCCGCAGGATTTGCACGATTCGAATGGTTTTGGTGCTAAGATTGAGTGTGTTCAGGCTAATAGGCCTACATCTAGCAGTTTGAGTTCTACCGTGGAATCGTTTAGTGGGCCGCGGATTTCTAACCCTTTGTCGTCCCTGTCTATGGTTCGTCGGAGGCCGGTTCAGCCAGTTTCGCCAGATGATTGTCATAGCGACTGTGATTCGTCTTCCTCGGTTGTTGATGATGATGAGGTCTGTGTTCTTGCTTCTTTCCGTAGAGCTTTGCCCTTTGATCTTAACTTACCACCTCCGATGGACGTCGTGGATTTAACCGGTGATGATCTTCAAGCTACTGCTTTATGCCTCTGA 660 47.88 MRRGRPSDPFTATEIPNSTIQPENPLKEIRYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDSAEEAARAYDNAARTLRGAKAKTNFPLHPSTISIQQQIPFYQSPQDLHDSNGFGAKIECVQANRPTSSSLSSTVESFSGPRISNPLSSLSMVRRRPVQPVSPDDCHSDCDSSSSVVDDDEVCVLASFRRALPFDLNLPPPMDVVDLTGDDLQATALCL* 220
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 13517880 13518539 + Chy11G195370.1 Chy11g00957 236718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g00957 219 Coils Coil 63 83 - -
Chy11g00957 219 CDD AP2 30 87 IPR001471 GO:0003700|GO:0006355
Chy11g00957 219 Gene3D AP2/ERF domain 29 89 IPR036955 GO:0003700|GO:0006355
Chy11g00957 219 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 3 26 194 - -
Chy11g00957 219 PRINTS Ethylene responsive element binding protein signature 31 42 IPR001471 GO:0003700|GO:0006355
Chy11g00957 219 PRINTS Ethylene responsive element binding protein signature 53 69 IPR001471 GO:0003700|GO:0006355
Chy11g00957 219 MobiDBLite consensus disorder prediction 1 26 - -
Chy11g00957 219 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 26 194 - -
Chy11g00957 219 ProSiteProfiles AP2/ERF domain profile. 30 87 IPR001471 GO:0003700|GO:0006355
Chy11g00957 219 SMART rav1_2 30 93 IPR001471 GO:0003700|GO:0006355
Chy11g00957 219 Pfam AP2 domain 30 79 IPR001471 GO:0003700|GO:0006355
Chy11g00957 219 SUPERFAMILY DNA-binding domain 30 88 IPR016177 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy01g00321 Chy11g00957 CCT
Chy01g00321 Chy11g00957 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00280 Chy-Chr2:1832881 Chy11g00957 Chy-Chr11:13517880 2.96E-32 dispersed
Chy05g00521 Chy-Chr5:5656034 Chy11g00957 Chy-Chr11:13517880 2.42E-76 dispersed
Chy06g01839 Chy-Chr6:22151171 Chy11g00957 Chy-Chr11:13517880 3.10E-45 dispersed
Chy07g00055 Chy-Chr7:491426 Chy11g00957 Chy-Chr11:13517880 4.02E-31 dispersed
Chy10g00855 Chy-Chr10:14433872 Chy11g00957 Chy-Chr11:13517880 9.20E-27 dispersed
Chy11g00957 Chy-Chr11:13517880 Chy02g01009 Chy-Chr2:6807260 6.06E-26 dispersed
Chy12g00915 Chy-Chr12:14549570 Chy11g00957 Chy-Chr11:13517880 1.39E-30 dispersed
Chy11g00957 Chy-Chr11:13517880 Chy12g00917 Chy-Chr12:14563893 1.65E-33 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18726 PF00847 AP2 4.20E-14 CL0081 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g00957 K09286 - csv:101221703 407.527