Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy11g00991 | ATGGATGCTAATGTACGAGCTCGTTTCACACTCGGCAAACAGTCCTCCCTCAACCCAGAACGTGAAGATTCGCATGTGGTTACCGACGCGCTTGATGATTCGATCGCGATTGATCCTGGGATTAAGCTTATGTACTTGGCCAATGATGGTGACTTGGATGGGATTAAGGAGCTACTGGACTCCGCTACGGATGTAAATTTTCACGACACTGATGGCCGAACCTCTTTGCATGTTGCTGCTTGTCAGGGCCGCCCGGATGTCGTTGAATTGCTACTTGAAAGGGGTGCGGAGGTTGATGTTCAGGACCAATGGGGTAGTACGCCTCTTGCAGATGCCATATATTACAAGAATCATGATGTGATCAATCTCTTAGAGAAGCATGGTGCAAAGCTGCCGATGGCACCAATGCTTGTGCAAAATGCTCGTGAAGTTCCGGAATATGAAATCATTCCAAATGAGCTTGATTTTTCTAATAGTGTGAACATTACAAAAGGAACTTTCCGCAGTGCTTCATGGCGTGGAATTCAAGTTGCTGTGAAGACACTAGGCGAGGAAGTTTTCACCGATGAAGATAAAGTGAAGGCATTTAGGGACGAACTTGGTTTACTTCAGAAGATACGCCATCCTAATGTTGTCCAATTTCTGGGAGCCGTTACACAAAGTAGTCCAATGATGATCGTCACAGAGTATTTGCCCCAGGGGGATCTTCATGCATTCTTGAAACGTAAAGGTTCCTTGAAGCTAGCAACAGTCGTAAAGTTTGCTCTTGACATTGCAAGGGGGATGAATTATTTGCATGAGCATAAACCTGAAGCAATAATCCATCGTGATCTTGAACCTTCAAACATACTGCGGGATGATTCTGGGCACCTGAAAGTTGCAGACTTTGGAGTTAGCAAACTTCTAAAATTTTCAAATAGGGTTAAAGAAGACAGACCTGTGGCTGTGACATGTCGTGAAACTTCATGGCGATATGCGGCGCCTGAGGTTTATAAAAATGAAGAATATGATACAAAAGTGGATGTATTTTCATTTTCTTTGATCTTGCAAGAGATGATCGAAGGCAATCCACCTTTTCCAACAATGCCAGAAAATGAAGTACCCAAAGCTTATATAGCTAACGAACGCCCACTATTTATGGCTCCACCAAAGCGTTATGCATTTGGAATACAAGAGCTAATTCAGGAATGTTGGGATGAGAAGCCGCAAAAAAGACCCACATTTCGGCAAATAATAAGAAGGTTGGAGGATATTAACACTCGACTCATGCAAACAAGAAGCTTGAAGCGCTTATGA | 1296 | 43.44 | MDANVRARFTLGKQSSLNPEREDSHVVTDALDDSIAIDPGIKLMYLANDGDLDGIKELLDSATDVNFHDTDGRTSLHVAACQGRPDVVELLLERGAEVDVQDQWGSTPLADAIYYKNHDVINLLEKHGAKLPMAPMLVQNAREVPEYEIIPNELDFSNSVNITKGTFRSASWRGIQVAVKTLGEEVFTDEDKVKAFRDELGLLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPQGDLHAFLKRKGSLKLATVVKFALDIARGMNYLHEHKPEAIIHRDLEPSNILRDDSGHLKVADFGVSKLLKFSNRVKEDRPVAVTCRETSWRYAAPEVYKNEEYDTKVDVFSFSLILQEMIEGNPPFPTMPENEVPKAYIANERPLFMAPPKRYAFGIQELIQECWDEKPQKRPTFRQIIRRLEDINTRLMQTRSLKRL* | 432 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 13942694 | 13959248 | + | Chy11G195710.1 | Chy11g00991 | 236752 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy11g00991 | 431 | CDD | STKc_MAP3K-like | 162 | 415 | - | - | |
Chy11g00991 | 431 | ProSiteProfiles | Protein kinase domain profile. | 148 | 422 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy11g00991 | 431 | Gene3D | Phosphorylase Kinase; domain 1 | 153 | 231 | - | - | |
Chy11g00991 | 431 | ProSiteProfiles | Ankyrin repeat region circular profile. | 71 | 102 | - | - | |
Chy11g00991 | 431 | Pfam | Protein tyrosine and serine/threonine kinase | 161 | 415 | IPR001245 | GO:0004672|GO:0006468 | |
Chy11g00991 | 431 | SUPERFAMILY | Ankyrin repeat | 42 | 133 | IPR036770 | - | |
Chy11g00991 | 431 | SMART | ANK_2a | 39 | 67 | IPR002110 | GO:0005515 | |
Chy11g00991 | 431 | SMART | ANK_2a | 71 | 100 | IPR002110 | GO:0005515 | |
Chy11g00991 | 431 | SMART | ANK_2a | 104 | 133 | IPR002110 | GO:0005515 | |
Chy11g00991 | 431 | PIRSF | ILK | 2 | 431 | - | - | |
Chy11g00991 | 431 | PANTHER | INTEGRIN-LINKED KINASE FAMILY PROTEIN | 9 | 429 | - | - | |
Chy11g00991 | 431 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 9 | 429 | - | - | |
Chy11g00991 | 431 | Gene3D | Transferase(Phosphotransferase) domain 1 | 232 | 430 | - | - | |
Chy11g00991 | 431 | Pfam | Ankyrin repeats (3 copies) | 43 | 131 | IPR002110 | GO:0005515 | |
Chy11g00991 | 431 | Gene3D | - | 33 | 143 | IPR036770 | - | |
Chy11g00991 | 431 | ProSiteProfiles | Ankyrin repeat profile. | 71 | 103 | IPR002110 | GO:0005515 | |
Chy11g00991 | 431 | SUPERFAMILY | Protein kinase-like (PK-like) | 162 | 422 | IPR011009 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy01g00307 | Chy-Chr1:2195586 | Chy11g00991 | Chy-Chr11:13942694 | 3.77E-136 | dispersed | |
Chy11g00991 | Chy-Chr11:13942694 | Chy12g00047 | Chy-Chr12:415459 | 0 | dispersed | |
Chy02g01311 | Chy-Chr2:9690011 | Chy11g00991 | Chy-Chr11:13942694 | 7.27E-09 | transposed | |
Chy10g01031 | Chy-Chr10:15602821 | Chy11g00991 | Chy-Chr11:13942694 | 2.15E-95 | transposed | |
Chy10g01375 | Chy-Chr10:17970899 | Chy11g00991 | Chy-Chr11:13942694 | 5.88E-16 | transposed | |
Chy11g00991 | Chy-Chr11:13942694 | Chy02g00198 | Chy-Chr2:1354518 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
71555 | PF07714 | PK_Tyr_Ser-Thr | 5.80E-59 | CL0016 | Chy | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy11g00991 | - | - | csv:101218932 | 847.04 |