Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g00991 ATGGATGCTAATGTACGAGCTCGTTTCACACTCGGCAAACAGTCCTCCCTCAACCCAGAACGTGAAGATTCGCATGTGGTTACCGACGCGCTTGATGATTCGATCGCGATTGATCCTGGGATTAAGCTTATGTACTTGGCCAATGATGGTGACTTGGATGGGATTAAGGAGCTACTGGACTCCGCTACGGATGTAAATTTTCACGACACTGATGGCCGAACCTCTTTGCATGTTGCTGCTTGTCAGGGCCGCCCGGATGTCGTTGAATTGCTACTTGAAAGGGGTGCGGAGGTTGATGTTCAGGACCAATGGGGTAGTACGCCTCTTGCAGATGCCATATATTACAAGAATCATGATGTGATCAATCTCTTAGAGAAGCATGGTGCAAAGCTGCCGATGGCACCAATGCTTGTGCAAAATGCTCGTGAAGTTCCGGAATATGAAATCATTCCAAATGAGCTTGATTTTTCTAATAGTGTGAACATTACAAAAGGAACTTTCCGCAGTGCTTCATGGCGTGGAATTCAAGTTGCTGTGAAGACACTAGGCGAGGAAGTTTTCACCGATGAAGATAAAGTGAAGGCATTTAGGGACGAACTTGGTTTACTTCAGAAGATACGCCATCCTAATGTTGTCCAATTTCTGGGAGCCGTTACACAAAGTAGTCCAATGATGATCGTCACAGAGTATTTGCCCCAGGGGGATCTTCATGCATTCTTGAAACGTAAAGGTTCCTTGAAGCTAGCAACAGTCGTAAAGTTTGCTCTTGACATTGCAAGGGGGATGAATTATTTGCATGAGCATAAACCTGAAGCAATAATCCATCGTGATCTTGAACCTTCAAACATACTGCGGGATGATTCTGGGCACCTGAAAGTTGCAGACTTTGGAGTTAGCAAACTTCTAAAATTTTCAAATAGGGTTAAAGAAGACAGACCTGTGGCTGTGACATGTCGTGAAACTTCATGGCGATATGCGGCGCCTGAGGTTTATAAAAATGAAGAATATGATACAAAAGTGGATGTATTTTCATTTTCTTTGATCTTGCAAGAGATGATCGAAGGCAATCCACCTTTTCCAACAATGCCAGAAAATGAAGTACCCAAAGCTTATATAGCTAACGAACGCCCACTATTTATGGCTCCACCAAAGCGTTATGCATTTGGAATACAAGAGCTAATTCAGGAATGTTGGGATGAGAAGCCGCAAAAAAGACCCACATTTCGGCAAATAATAAGAAGGTTGGAGGATATTAACACTCGACTCATGCAAACAAGAAGCTTGAAGCGCTTATGA 1296 43.44 MDANVRARFTLGKQSSLNPEREDSHVVTDALDDSIAIDPGIKLMYLANDGDLDGIKELLDSATDVNFHDTDGRTSLHVAACQGRPDVVELLLERGAEVDVQDQWGSTPLADAIYYKNHDVINLLEKHGAKLPMAPMLVQNAREVPEYEIIPNELDFSNSVNITKGTFRSASWRGIQVAVKTLGEEVFTDEDKVKAFRDELGLLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPQGDLHAFLKRKGSLKLATVVKFALDIARGMNYLHEHKPEAIIHRDLEPSNILRDDSGHLKVADFGVSKLLKFSNRVKEDRPVAVTCRETSWRYAAPEVYKNEEYDTKVDVFSFSLILQEMIEGNPPFPTMPENEVPKAYIANERPLFMAPPKRYAFGIQELIQECWDEKPQKRPTFRQIIRRLEDINTRLMQTRSLKRL* 432
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 13942694 13959248 + Chy11G195710.1 Chy11g00991 236752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g00991 431 CDD STKc_MAP3K-like 162 415 - -
Chy11g00991 431 ProSiteProfiles Protein kinase domain profile. 148 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy11g00991 431 Gene3D Phosphorylase Kinase; domain 1 153 231 - -
Chy11g00991 431 ProSiteProfiles Ankyrin repeat region circular profile. 71 102 - -
Chy11g00991 431 Pfam Protein tyrosine and serine/threonine kinase 161 415 IPR001245 GO:0004672|GO:0006468
Chy11g00991 431 SUPERFAMILY Ankyrin repeat 42 133 IPR036770 -
Chy11g00991 431 SMART ANK_2a 39 67 IPR002110 GO:0005515
Chy11g00991 431 SMART ANK_2a 71 100 IPR002110 GO:0005515
Chy11g00991 431 SMART ANK_2a 104 133 IPR002110 GO:0005515
Chy11g00991 431 PIRSF ILK 2 431 - -
Chy11g00991 431 PANTHER INTEGRIN-LINKED KINASE FAMILY PROTEIN 9 429 - -
Chy11g00991 431 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 9 429 - -
Chy11g00991 431 Gene3D Transferase(Phosphotransferase) domain 1 232 430 - -
Chy11g00991 431 Pfam Ankyrin repeats (3 copies) 43 131 IPR002110 GO:0005515
Chy11g00991 431 Gene3D - 33 143 IPR036770 -
Chy11g00991 431 ProSiteProfiles Ankyrin repeat profile. 71 103 IPR002110 GO:0005515
Chy11g00991 431 SUPERFAMILY Protein kinase-like (PK-like) 162 422 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00307 Chy-Chr1:2195586 Chy11g00991 Chy-Chr11:13942694 3.77E-136 dispersed
Chy11g00991 Chy-Chr11:13942694 Chy12g00047 Chy-Chr12:415459 0 dispersed
Chy02g01311 Chy-Chr2:9690011 Chy11g00991 Chy-Chr11:13942694 7.27E-09 transposed
Chy10g01031 Chy-Chr10:15602821 Chy11g00991 Chy-Chr11:13942694 2.15E-95 transposed
Chy10g01375 Chy-Chr10:17970899 Chy11g00991 Chy-Chr11:13942694 5.88E-16 transposed
Chy11g00991 Chy-Chr11:13942694 Chy02g00198 Chy-Chr2:1354518 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71555 PF07714 PK_Tyr_Ser-Thr 5.80E-59 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g00991 - - csv:101218932 847.04