Cucurbitales platform

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Chy11g00992	ATGGTGAAGTTTACAGCCGAGGAGCTTCGTAGGATTATGGACTATAAGCATAACATTCGTAATATGTCTGTTATTGCTCACGTCGATCATGGAAAGTCGACACTTACAGATTCTCTTGTGGCTGCTGCGGGTATCATTGCACAAGAAGTTGCTGGTGATGTACGAATGACAGATACTCGCCAAGATGAGGCAGAGCGTGGTATCACCATTAAATCTACTGGAATCTCCCTCTACTATGAGATGTCTGATGAATCCTTGAAAGGTTACAAGGGAGAGAGACACGGAAATGAGTATCTTATCAATCTTATTGATTCACCTGGGCACGTTGACTTCTCGTCGGAGGTTACAGCTGCTTTGCGTATTACTGATGGTGCCCTTGTTGTGGTGGATTGCATCGAAGGTGTTTGTGTCCAAACAGAGACTGTGCTCCGTCAGGCTTTGGGAGAGAGGATTAGACCTGTCTTGACTGTTAACAAGATGGATAGGTGCTTCCTTGAACTTCAAGTGGATGGAGAAGAGGCTTATCAAACATTCCAGAGGGTCATTGAGAATGCCAATGTGATTATGGCCACATATGAGGATCCACTTCTTGGCGATGTTCAAGTGTACCCGGAGAAAGGAACAGTTGCTTTCTCTGCTGGTTTGCACGGTTGGGCATTTACCCTGACTAACTTTGCCAAGATGTATGCCTCCAAGTTTGGAGTAGATGAGGCTAAGATGATGGAGAGACTTTGGGGTGAGAATTTCTTTGATCCTGCAACCAAGAAGTGGACAAGCAAGAACACTGGCACCCCAACATGCAAGCGTGGGTTTGTCCAGTTCTGCTACGAACCTATCAAGCAGATCATTGCAACTTGCATGAACGATCGGAAGGACAAGCTATGGCCCATGTTGCAGAAGCTTGGTGTTGTCATGAAGTCTGATGAGAAGGATCTGATGGGCAAACCATTGATGAAGCGGGTCATGCAAACATGGCTACCAGCAAGTACTGCTCTTTTGGAAATGATGATCTTTCATCTTCCATCCCCTGCCAAGGCTCAAAAGTATCGTGTGGAGAATTTGTACGAGGGTCCACAAGATGATGCTTATGCTAGCGCCATTAGAAATTGTGATCCTGAGGGACCTCTTATGCTTTATGTATCAAAGATGATTCCAGCATCTGACAAGGGCAGGTTCTTTGCCTTCGGACGTGTGTTCTCTGGGAAAGTTTCAACTGGTTTGAAAGTTAGAATCATGGGCCCCAACTATGTTCCTGGTGAGAAAAAAGATTTGTATGTTAAGAGCGTCCAGAGAACTGTCATTTGGATGGGAAAGAAGCAAGAAACAGTGGAGGATGTGCCTTGTGGTAACACTGTTGCCATGGTTGGGTTGGATCAGTTTATCACTAAGAATGCCACTCTGACGAATGAAAAGGAAGTCGATGCTCATCCAATTCGAGCCATGAAGTTTTCTGTATCTCCCGTCGTGCGTGTTGCCGTTCAGTGCAAGGTGGCCTCTGATCTTCCCAAGCTTGTGGAAGGACTTAAACGTCTGGCCAAGTCAGACCCTATGGTTGTGTGTACCATGGAGGAATCTGGTGAGCACATTGTTGCTGGCGCTGGAGAACTACATCTTGAGATCTGTTTGAAGGATTTGCAAGATGATTTCATGGGTGGAGCTGAGATCATAAAATCTGACCCTGTTGTCTCTTTCCGTGAAACCGTACTTGAGAGGTCATGCCGCACAGTGATGAGCAAGTCCCCTAACAAACACAATCGACTGTACATGGAAGCACGACCCATGGAGGATGGACTGGCAGAGGCTATTGATGATGGCCGCATTGGACCACGAGATGATCCTAAAGTTAGGTCTAAAATTTTGTCAGAGGAGTTTGGTTGGGACAAAGATCTTGCTAAGAAGATTTGGTGCTTTGGTCCTGAGACTACCGGCCCTAACATGGTGGTTGATATGTGTAAGGGAGTTCAATACCTGAATGAAATCAAGGATTCCGTTGTTGCTGGTTTCCAATGGGCGTCGAAAGAAGGTGCATTGGCGGAAGAGAACATGAGAGGCATCTGTTTTGAAGTTTGTGATGTGGTGCTTCACGCTGATGCCATCCACAGAGGAGGTGGTCAAGTGATTCCGACTGCTAGGAGGGTAATCTACGCTTCTCAACTGACTGCCAAACCAAGACTTCTTGAGCCAGTGTACCTAGTGGAGATTCAGGCTCCCGAGCAAGCTCTTGGTGGTATCTACAGTGTTCTTAACCAAAAGCGTGGGCACGTCTTTGAGGAAATGCAGAGGCCTGGCACACCTCTTTACAACATCAAGGCATATCTCCCTGTCATCGAATCATTTGGGTTCTCGAGCACTTTGAGAGCTGCAACTTCTGGACAGGCATTCCCACAGTGTGTGTTTGACCATTGGGAAATGATGTCTTCAGATCCATTAGAAAGTGGGTCTCAAGCTGCGCAGTTGGTTGCTGATATCAGGAAGAGGAAGGGGTTGAAGGAGCAAATGACCCCACTTTCCGATTTCGAGGACAAGCTGTAA	2532	46.56	MVKFTAEELRRIMDYKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMSDESLKGYKGERHGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQRVIENANVIMATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDEAKMMERLWGENFFDPATKKWTSKNTGTPTCKRGFVQFCYEPIKQIIATCMNDRKDKLWPMLQKLGVVMKSDEKDLMGKPLMKRVMQTWLPASTALLEMMIFHLPSPAKAQKYRVENLYEGPQDDAYASAIRNCDPEGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTMEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLERSCRTVMSKSPNKHNRLYMEARPMEDGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSSTLRAATSGQAFPQCVFDHWEMMSSDPLESGSQAAQLVADIRKRKGLKEQMTPLSDFEDKL*	844

Gff information

Chromosome	Start	End	Strand	Old_gene	Gene	Num
11	13981602	13984758	+	Chy11G195720.1	Chy11g00992	236753

Annotation

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Chy11g00992	843	SUPERFAMILY	Translation proteins	342	476	IPR009000	-
Chy11g00992	843	TIGRFAM	small_GTP: small GTP-binding protein domain	20	176	IPR005225	GO:0005525
Chy11g00992	843	Pfam	Elongation factor Tu GTP binding domain	17	342	IPR000795	GO:0003924\|GO:0005525
Chy11g00992	843	Gene3D	-	3	237	IPR027417	-
Chy11g00992	843	PRINTS	GTP-binding elongation factor signature	65	73	IPR000795	GO:0003924\|GO:0005525
Chy11g00992	843	PRINTS	GTP-binding elongation factor signature	153	162	IPR000795	GO:0003924\|GO:0005525
Chy11g00992	843	PRINTS	GTP-binding elongation factor signature	101	111	IPR000795	GO:0003924\|GO:0005525
Chy11g00992	843	PRINTS	GTP-binding elongation factor signature	117	128	IPR000795	GO:0003924\|GO:0005525
Chy11g00992	843	PRINTS	GTP-binding elongation factor signature	21	34	IPR000795	GO:0003924\|GO:0005525
Chy11g00992	843	Gene3D	Translation factors	343	484	-	-
Chy11g00992	843	SMART	EFG_IV_2	606	722	IPR005517	GO:0005525
Chy11g00992	843	CDD	aeEF2_snRNP_like_IV	559	731	-	-
Chy11g00992	843	Pfam	Elongation factor Tu domain 2	394	467	IPR004161	GO:0005525
Chy11g00992	843	ProSitePatterns	Translational (tr)-type guanine nucleotide-binding (G) domain signature.	58	73	IPR031157	-
Chy11g00992	843	SUPERFAMILY	EF-G C-terminal domain-like	727	837	IPR035647	-
Chy11g00992	843	ProSiteProfiles	Translational (tr)-type guanine nucleotide-binding (G) domain profile.	17	344	IPR000795	GO:0003924\|GO:0005525
Chy11g00992	843	Pfam	Elongation factor G C-terminus	724	811	IPR000640	-
Chy11g00992	843	CDD	EF2	20	230	-	-
Chy11g00992	843	SUPERFAMILY	EF-G C-terminal domain-like	484	560	IPR035647	-
Chy11g00992	843	CDD	EF2_snRNP_III	487	559	-	-
Chy11g00992	843	Pfam	Elongation factor G, domain IV	611	722	IPR005517	GO:0005525
Chy11g00992	843	CDD	eEF2_snRNP_like_C	727	805	-	-
Chy11g00992	843	Gene3D	-	723	843	-	-
Chy11g00992	843	PANTHER	TRANSLATION ELONGATION FACTOR-RELATED	1	842	-	-
Chy11g00992	843	Gene3D	-	570	722	IPR014721	-
Chy11g00992	843	PANTHER	-	1	842	-	-
Chy11g00992	843	SUPERFAMILY	Ribosomal protein S5 domain 2-like	562	726	IPR020568	-
Chy11g00992	843	Pfam	Elongation Factor G, domain III	487	549	IPR041095	-
Chy11g00992	843	CDD	EF2_II	375	470	-	-
Chy11g00992	843	SMART	EFG_C_a	724	813	IPR000640	-
Chy11g00992	843	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	4	341	IPR027417	-
Chy11g00992	843	Gene3D	Elongation Factor G (Translational Gtpase), domain 3	486	563	-	-

Pathway

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Chy11g00992	K03234	EEF2; elongation factor 2	-	csv:101209544	1686.0

Dupl-types

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	Chy11g00992	Chy-Chr11:13981602	Chy11g01016	Chy-Chr11:14340912	0	dispersed
	Chy11g00990	Chy-Chr11:13925210	Chy11g00992	Chy-Chr11:13981602	0	proximal

Syn-Families

Gene	Event_type	S_start	S_end	Function	Ath_gene	Identity(%)	E-value	Score
Chy09g00716	.	1	450	Eukaryotic Initiation Factors Gene Family	AT5G60390	95.6	1.2e-253	872.1
Chy05g00564	.	1	446	Eukaryotic Initiation Factors Gene Family	AT5G60390	96.2	4.6e-253	870.2
Chy09g00715	.	1	450	Eukaryotic Initiation Factors Gene Family	AT5G60390	94.7	5.7e-251	863.2
Chy09g00713	.	1	450	Eukaryotic Initiation Factors Gene Family	AT5G60390	94.7	9.7e-251	862.4
Chy11g01323	.	1	294	Eukaryotic Initiation Factors Gene Family	AT5G60390	96.3	3.3e-166	581.6
Chy11g01324	.	1	116	Eukaryotic Initiation Factors Gene Family	AT5G60390	91.4	9.6e-57	218.0
Chy09g00716	.	1	450	Eukaryotic Initiation Factors Gene Family	AT1G07920	95.6	1.2e-253	872.1
Chy05g00564	.	1	446	Eukaryotic Initiation Factors Gene Family	AT1G07920	96.2	4.6e-253	870.2
Chy09g00715	.	1	450	Eukaryotic Initiation Factors Gene Family	AT1G07920	94.7	5.7e-251	863.2
Chy09g00713	.	1	450	Eukaryotic Initiation Factors Gene Family	AT1G07920	94.7	9.7e-251	862.4
Chy11g01323	.	1	294	Eukaryotic Initiation Factors Gene Family	AT1G07920	96.3	3.3e-166	581.6
Chy11g01324	.	1	116	Eukaryotic Initiation Factors Gene Family	AT1G07920	91.4	9.6e-57	218.0
Chy09g00716	.	1	450	Eukaryotic Initiation Factors Gene Family	AT1G07930	79.6	3.4e-201	697.6
Chy05g00564	.	1	446	Eukaryotic Initiation Factors Gene Family	AT1G07930	80.3	5.8e-201	696.8
Chy09g00715	.	1	450	Eukaryotic Initiation Factors Gene Family	AT1G07930	78.7	2.1e-198	688.3
Chy09g00713	.	1	450	Eukaryotic Initiation Factors Gene Family	AT1G07930	78.7	3.5e-198	687.6
Chy11g01323	.	1	255	Eukaryotic Initiation Factors Gene Family	AT1G07930	98.0	7.0e-146	513.8
Chy11g01324	.	1	116	Eukaryotic Initiation Factors Gene Family	AT1G07930	91.4	7.9e-57	218.0
Chy09g00716	.	1	450	Eukaryotic Initiation Factors Gene Family	AT1G07940	95.6	1.2e-253	872.1
Chy05g00564	.	1	446	Eukaryotic Initiation Factors Gene Family	AT1G07940	96.2	4.6e-253	870.2
Chy09g00715	.	1	450	Eukaryotic Initiation Factors Gene Family	AT1G07940	94.7	5.7e-251	863.2
Chy09g00713	.	1	450	Eukaryotic Initiation Factors Gene Family	AT1G07940	94.7	9.7e-251	862.4
Chy11g01323	.	1	294	Eukaryotic Initiation Factors Gene Family	AT1G07940	96.3	3.3e-166	581.6
Chy11g01324	.	1	116	Eukaryotic Initiation Factors Gene Family	AT1G07940	91.4	9.6e-57	218.0
Chy05g01167	.	1	715	Eukaryotic Initiation Factors Gene Family	AT3G02270	55.1	3.4e-175	612.1
Chy01g00417	.	59	172	Eukaryotic Initiation Factors Gene Family	AT4G27130	88.6	1.9e-54	208.4
Chy06g01817	.	13	125	Eukaryotic Initiation Factors Gene Family	AT4G27130	80.7	3.9e-47	184.1
Chy01g00417	.	59	172	Eukaryotic Initiation Factors Gene Family	AT5G54760	87.7	4.3e-54	207.2
Chy06g01817	.	13	125	Eukaryotic Initiation Factors Gene Family	AT5G54760	80.7	3.9e-47	184.1
Chy06g01817	.	13	125	Eukaryotic Initiation Factors Gene Family	AT5G54940	85.8	4.7e-53	203.8
Chy01g00417	.	59	172	Eukaryotic Initiation Factors Gene Family	AT5G54940	73.7	1.5e-43	172.2
Chy01g00417	.	59	172	Eukaryotic Initiation Factors Gene Family	AT1G54290	88.6	5.1e-55	210.3
Chy06g01817	.	13	125	Eukaryotic Initiation Factors Gene Family	AT1G54290	81.6	3.5e-48	187.6
Chy01g00478	.	1	128	Eukaryotic Initiation Factors Gene Family	AT5G35680	93.8	4.9e-66	247.3
Chy11g00291	.	51	173	Eukaryotic Initiation Factors Gene Family	AT5G35680	93.5	8.7e-63	236.5
Chy01g00478	.	1	146	Eukaryotic Initiation Factors Gene Family	AT2G04520	89.0	3.2e-70	261.2
Chy11g00291	.	51	173	Eukaryotic Initiation Factors Gene Family	AT2G04520	95.1	5.8e-64	240.4
Chy01g00917	.	1	225	Eukaryotic Initiation Factors Gene Family	AT2G40290	88.4	6.4e-116	413.7
Chy01g00917	.	1	345	Eukaryotic Initiation Factors Gene Family	AT5G05470	80.6	6.2e-157	550.4
Chy12g00733	.	24	291	Eukaryotic Initiation Factors Gene Family	AT5G20920	75.2	1.3e-109	392.9
Chy12g00733	.	138	278	Eukaryotic Initiation Factors Gene Family	AT5G01940	56.3	1.4e-38	156.8
Chy12g00733	.	142	285	Eukaryotic Initiation Factors Gene Family	AT3G07920	70.9	5.1e-56	214.2
Chy10g00035	.	1	465	Eukaryotic Initiation Factors Gene Family	AT1G04170	91.4	2.0e-246	848.2
Chy10g00035	.	4	465	Eukaryotic Initiation Factors Gene Family	AT4G18330	82.7	4.6e-219	757.3
Chy10g00035	.	93	463	Eukaryotic Initiation Factors Gene Family	AT2G18720	75.5	4.9e-163	570.9
Chy01g02129	.	1	395	Eukaryotic Initiation Factors Gene Family	AT1G53880	79.3	2.1e-169	592.0
Chy01g02129	.	1	326	Eukaryotic Initiation Factors Gene Family	AT1G72340	77.1	1.2e-133	473.0
Chy02g01284	.	56	378	Eukaryotic Initiation Factors Gene Family	AT2G05830	74.0	2.1e-133	472.2
Chy02g02387	.	1	655	Eukaryotic Initiation Factors Gene Family	AT5G38640	59.9	4.7e-198	688.0
Chy02g02388	.	100	623	Eukaryotic Initiation Factors Gene Family	AT5G38640	64.2	5.0e-176	614.8
Chy02g02387	.	329	652	Eukaryotic Initiation Factors Gene Family	AT2G44070	75.4	7.9e-141	496.9
Chy02g02388	.	318	623	Eukaryotic Initiation Factors Gene Family	AT2G44070	73.6	1.5e-128	456.1
Chy02g02387	.	1	584	Eukaryotic Initiation Factors Gene Family	AT1G48970	56.4	9.6e-164	573.9
Chy02g02388	.	57	573	Eukaryotic Initiation Factors Gene Family	AT1G48970	57.1	2.9e-152	535.8
Chy05g01167	.	1	723	Eukaryotic Initiation Factors Gene Family	AT2G34970	64.0	1.9e-232	802.4
Chy05g01167	.	1	715	Eukaryotic Initiation Factors Gene Family	AT3G02270	55.1	3.4e-175	612.1
Chy05g01167	.	1	725	Eukaryotic Initiation Factors Gene Family	AT4G18300	59.0	6.5e-201	697.6
Chy12g01567	.	120	1059	Eukaryotic Initiation Factors Gene Family	AT1G48410	83.6	0.0e+00	1568.9
Chy02g01948	.	66	927	Eukaryotic Initiation Factors Gene Family	AT1G48410	70.3	0.0e+00	1247.6
Chy06g00537	.	1	722	Eukaryotic Initiation Factors Gene Family	AT1G48410	72.1	1.1e-305	1046.2
Chy12g00749	.	133	1023	Eukaryotic Initiation Factors Gene Family	AT1G48410	58.6	1.5e-302	1035.8
Chy06g00536	.	119	324	Eukaryotic Initiation Factors Gene Family	AT1G48410	73.4	5.3e-82	303.1
Chy12g01567	.	184	1059	Eukaryotic Initiation Factors Gene Family	AT5G43810	77.0	0.0e+00	1382.1
Chy02g01948	.	69	927	Eukaryotic Initiation Factors Gene Family	AT5G43810	74.5	0.0e+00	1334.3
Chy06g00537	.	1	722	Eukaryotic Initiation Factors Gene Family	AT5G43810	84.2	0.0e+00	1223.0
Chy12g00749	.	99	1023	Eukaryotic Initiation Factors Gene Family	AT5G43810	54.2	1.3e-287	986.1
Chy06g00536	.	1	324	Eukaryotic Initiation Factors Gene Family	AT5G43810	66.5	1.2e-115	414.8
Chy12g00395	.	1	921	Eukaryotic Initiation Factors Gene Family	AT4G11420	72.8	0.0e+00	1118.2
Chy12g00394	.	1	690	Eukaryotic Initiation Factors Gene Family	AT4G11420	60.5	4.4e-179	625.5
Chy12g00393	.	1	176	Eukaryotic Initiation Factors Gene Family	AT4G11420	89.8	7.9e-88	322.4
Chy01g01175	.	9	712	Eukaryotic Initiation Factors Gene Family	AT5G27640	76.0	0.0e+00	1126.3
Chy01g01043	.	5	712	Eukaryotic Initiation Factors Gene Family	AT5G27640	74.6	0.0e+00	1114.8
Chy01g01175	.	9	712	Eukaryotic Initiation Factors Gene Family	AT5G25780	74.5	0.0e+00	1107.0
Chy01g01043	.	9	712	Eukaryotic Initiation Factors Gene Family	AT5G25780	73.0	0.0e+00	1090.1
Chy06g01140	.	48	989	Eukaryotic Initiation Factors Gene Family	AT3G56150	67.7	0.0e+00	1138.6
Chy06g01140	.	50	891	Eukaryotic Initiation Factors Gene Family	AT3G22860	58.7	4.0e-255	877.9
Chy02g00064	.	5	535	Eukaryotic Initiation Factors Gene Family	AT4G20980	81.0	1.7e-255	878.6
Chy02g00064	.	5	535	Eukaryotic Initiation Factors Gene Family	AT5G44320	79.1	1.3e-247	852.4
Chy08g00141	.	3	441	Eukaryotic Initiation Factors Gene Family	AT3G57290	86.8	7.3e-227	783.1
Chy03g00174	.	2	286	Eukaryotic Initiation Factors Gene Family	AT2G39990	76.0	4.4e-127	451.1
Chy06g01392	.	4	289	Eukaryotic Initiation Factors Gene Family	AT3G11400	68.9	7.7e-117	417.2
Chy12g01575	.	8	290	Eukaryotic Initiation Factors Gene Family	AT3G11400	69.2	1.4e-115	412.9
Chy06g01392	.	2	286	Eukaryotic Initiation Factors Gene Family	AT5G06000	67.4	1.4e-107	386.3
Chy12g01575	.	9	287	Eukaryotic Initiation Factors Gene Family	AT5G06000	68.7	3.1e-107	385.2
Chy07g01453	.	88	318	Eukaryotic Initiation Factors Gene Family	AT1G10840	82.7	1.2e-109	392.9
Chy04g01570	.	1	247	Eukaryotic Initiation Factors Gene Family	AT2G46280	65.5	8.8e-92	333.6
Chy04g01570	.	1	305	Eukaryotic Initiation Factors Gene Family	AT2G46290	79.2	1.3e-144	509.6
Chy02g01305	.	1	232	Eukaryotic Initiation Factors Gene Family	AT4G33250	75.0	8.1e-97	350.1
Chy01g02191	.	246	636	Eukaryotic Initiation Factors Gene Family	AT3G13920	93.6	7.7e-210	726.5
Chy04g00666	.	271	661	Eukaryotic Initiation Factors Gene Family	AT3G13920	92.6	3.2e-208	721.1
Chy04g01200	.	38	346	Eukaryotic Initiation Factors Gene Family	AT3G13920	66.3	8.5e-116	414.1
Chy01g02191	.	246	659	Eukaryotic Initiation Factors Gene Family	AT1G72730	89.9	4.2e-216	747.3
Chy04g00666	.	271	684	Eukaryotic Initiation Factors Gene Family	AT1G72730	89.2	4.6e-215	743.8
Chy04g01200	.	38	346	Eukaryotic Initiation Factors Gene Family	AT1G72730	65.4	1.7e-113	406.4
Chy04g01200	.	22	346	Eukaryotic Initiation Factors Gene Family	AT3G19760	86.2	1.7e-161	565.8
Chy01g02191	.	282	659	Eukaryotic Initiation Factors Gene Family	AT3G19760	64.3	8.2e-140	493.8
Chy04g00666	.	307	684	Eukaryotic Initiation Factors Gene Family	AT3G19760	63.8	9.1e-139	490.3
Chy03g01124	.	1	424	Eukaryotic Initiation Factors Gene Family	AT5G11200	85.8	1.6e-224	775.4
Chy03g01124	.	84	424	Eukaryotic Initiation Factors Gene Family	AT5G11170	95.0	8.9e-188	652.9
Chy03g01704	.	1	529	Eukaryotic Initiation Factors Gene Family	AT3G26400	50.3	1.5e-101	367.1
Chy03g01704	.	1	530	Eukaryotic Initiation Factors Gene Family	AT1G13020	50.4	1.1e-107	387.5
Chy11g00288	CCT	2	389	Eukaryotic Initiation Factors Gene Family	AT4G38710	55.0	5.2e-74	275.4
Chy12g00020	.	1	233	Eukaryotic Initiation Factors Gene Family	AT4G18040	68.8	1.7e-92	335.9
Chy05g00296	.	23	202	Eukaryotic Initiation Factors Gene Family	AT4G18040	54.1	4.5e-58	221.5
Chy12g00020	.	48	233	Eukaryotic Initiation Factors Gene Family	AT1G29590	62.9	6.7e-73	270.8
Chy05g00296	.	25	202	Eukaryotic Initiation Factors Gene Family	AT1G29590	52.5	1.8e-54	209.5
Chy12g00020	.	48	233	Eukaryotic Initiation Factors Gene Family	AT1G29550	63.4	3.9e-73	271.6
Chy05g00296	.	25	202	Eukaryotic Initiation Factors Gene Family	AT1G29550	52.0	6.9e-54	207.6
Chy05g00296	.	12	193	Eukaryotic Initiation Factors Gene Family	AT5G35620	68.3	5.1e-71	264.2
Chy12g00020	.	58	224	Eukaryotic Initiation Factors Gene Family	AT5G35620	55.8	1.6e-51	199.5
Chy04g01388	.	48	239	Eukaryotic Initiation Factors Gene Family	AT5G18110	84.4	1.0e-96	349.7
Chy02g02139	.	1	799	Eukaryotic Initiation Factors Gene Family	AT5G57870	62.5	1.4e-265	912.5
Chy07g00318	.	51	738	Eukaryotic Initiation Factors Gene Family	AT5G57870	58.3	2.8e-221	765.4
Chy02g02139	.	2	799	Eukaryotic Initiation Factors Gene Family	AT2G24050	55.1	6.1e-226	780.8
Chy07g00318	.	49	739	Eukaryotic Initiation Factors Gene Family	AT2G24050	57.0	1.1e-209	726.9
Chy02g02139	.	255	445	Eukaryotic Initiation Factors Gene Family	AT1G62410	52.9	3.1e-48	188.7
Chy03g01012	.	1	444	Eukaryotic Initiation Factors Gene Family	AT1G77840	60.9	3.2e-134	475.3
Chy03g01012	.	1	445	Eukaryotic Initiation Factors Gene Family	AT1G36730	69.1	5.7e-123	438.0
Chy10g01040	.	264	390	Eukaryotic Initiation Factors Gene Family	AT1G26630	83.5	3.5e-58	221.1
Chy03g01084	.	1	127	Eukaryotic Initiation Factors Gene Family	AT1G26630	80.3	1.2e-55	212.6
Chy02g02123	.	1	141	Eukaryotic Initiation Factors Gene Family	AT1G26630	73.8	5.2e-54	207.2
Chy07g00329	.	1	189	Eukaryotic Initiation Factors Gene Family	AT1G26630	56.6	2.3e-49	191.8
Chy10g01040	.	264	423	Eukaryotic Initiation Factors Gene Family	AT1G69410	83.8	5.5e-76	280.4
Chy03g01084	.	1	159	Eukaryotic Initiation Factors Gene Family	AT1G69410	85.5	7.2e-76	280.0
Chy02g02123	.	1	173	Eukaryotic Initiation Factors Gene Family	AT1G69410	77.5	3.7e-72	267.7
Chy07g00329	.	1	249	Eukaryotic Initiation Factors Gene Family	AT1G69410	54.6	2.0e-62	235.3
Chy03g01084	.	1	159	Eukaryotic Initiation Factors Gene Family	AT1G13950	88.1	1.6e-75	278.9
Chy10g01040	.	264	423	Eukaryotic Initiation Factors Gene Family	AT1G13950	86.3	2.8e-75	278.1
Chy02g02123	.	1	173	Eukaryotic Initiation Factors Gene Family	AT1G13950	79.8	7.5e-73	270.0
Chy07g00329	.	1	249	Eukaryotic Initiation Factors Gene Family	AT1G13950	57.4	1.7e-64	242.3
Chy01g01288	.	336	1351	Eukaryotic Initiation Factors Gene Family	AT1G76810	68.9	0.0e+00	1147.5
Chy01g01288	.	468	1335	Eukaryotic Initiation Factors Gene Family	AT1G21160	59.4	7.0e-263	904.0
Chy08g01016	.	133	374	Eukaryotic Initiation Factors Gene Family	AT3G55620	86.8	1.4e-121	432.6
Chy11g00024	.	756	966	Eukaryotic Initiation Factors Gene Family	AT3G55620	84.4	3.1e-102	368.2
Chy08g01016	.	137	374	Eukaryotic Initiation Factors Gene Family	AT2G39820	68.2	1.0e-92	336.7
Chy11g00024	.	756	966	Eukaryotic Initiation Factors Gene Family	AT2G39820	66.4	9.9e-80	293.5
Chy06g01071	.	15	652	Eukaryotic Initiation Factors Gene Family	AT2G23350	59.9	1.1e-202	703.4
Chy01g00064	.	5	698	Eukaryotic Initiation Factors Gene Family	AT2G23350	54.1	3.2e-194	675.2
Chy04g02000	.	10	172	Eukaryotic Initiation Factors Gene Family	AT2G23350	51.5	6.8e-43	172.6
Chy06g01071	.	18	649	Eukaryotic Initiation Factors Gene Family	AT4G34110	71.7	2.5e-252	868.2
Chy01g00064	.	1	695	Eukaryotic Initiation Factors Gene Family	AT4G34110	64.8	1.8e-242	835.5
Chy03g00475	.	21	677	Eukaryotic Initiation Factors Gene Family	AT4G34110	53.2	2.8e-171	599.0
Chy04g02000	.	15	172	Eukaryotic Initiation Factors Gene Family	AT4G34110	56.3	8.1e-46	182.2
Chy03g00475	.	1	659	Eukaryotic Initiation Factors Gene Family	AT1G22760	56.1	3.1e-189	658.7
Chy06g01071	.	29	625	Eukaryotic Initiation Factors Gene Family	AT1G22760	55.4	9.7e-167	583.9
Chy01g00064	.	26	676	Eukaryotic Initiation Factors Gene Family	AT1G22760	50.2	6.3e-158	554.7
Chy04g02000	.	14	172	Eukaryotic Initiation Factors Gene Family	AT1G22760	53.5	2.2e-41	167.5
Chy03g00475	.	34	661	Eukaryotic Initiation Factors Gene Family	AT1G71770	56.2	2.4e-184	642.5
Chy06g01071	.	29	628	Eukaryotic Initiation Factors Gene Family	AT1G71770	54.4	7.7e-167	584.3
Chy01g00064	.	26	676	Eukaryotic Initiation Factors Gene Family	AT1G71770	50.6	1.2e-159	560.5
Chy04g02000	.	2	172	Eukaryotic Initiation Factors Gene Family	AT1G71770	50.3	3.2e-40	163.7
Chy06g01071	.	3	653	Eukaryotic Initiation Factors Gene Family	AT1G49760	70.3	4.6e-257	884.0
Chy01g00064	.	25	698	Eukaryotic Initiation Factors Gene Family	AT1G49760	66.6	1.4e-242	835.9
Chy03g00475	.	34	676	Eukaryotic Initiation Factors Gene Family	AT1G49760	50.2	1.5e-159	560.1
Chy04g02000	.	9	172	Eukaryotic Initiation Factors Gene Family	AT1G49760	54.9	1.3e-46	184.9
Chy04g02000	.	14	172	Eukaryotic Initiation Factors Gene Family	AT2G36660	64.8	6.4e-56	215.7
Chy09g00716	.	1	450	Eukaryotic Initiation Factors Gene Family	AT1G07920	95.6	1.2e-253	872.1
Chy05g00564	.	1	446	Eukaryotic Initiation Factors Gene Family	AT1G07920	96.2	4.6e-253	870.2
Chy09g00715	.	1	450	Eukaryotic Initiation Factors Gene Family	AT1G07920	94.7	5.7e-251	863.2
Chy09g00713	.	1	450	Eukaryotic Initiation Factors Gene Family	AT1G07920	94.7	9.7e-251	862.4
Chy11g01323	.	1	294	Eukaryotic Initiation Factors Gene Family	AT1G07920	96.3	3.3e-166	581.6
Chy11g01324	.	1	116	Eukaryotic Initiation Factors Gene Family	AT1G07920	91.4	9.6e-57	218.0
Chy09g00716	.	1	450	Eukaryotic Initiation Factors Gene Family	AT1G07930	79.6	3.4e-201	697.6
Chy05g00564	.	1	446	Eukaryotic Initiation Factors Gene Family	AT1G07930	80.3	5.8e-201	696.8
Chy09g00715	.	1	450	Eukaryotic Initiation Factors Gene Family	AT1G07930	78.7	2.1e-198	688.3
Chy09g00713	.	1	450	Eukaryotic Initiation Factors Gene Family	AT1G07930	78.7	3.5e-198	687.6
Chy11g01323	.	1	255	Eukaryotic Initiation Factors Gene Family	AT1G07930	98.0	7.0e-146	513.8
Chy11g01324	.	1	116	Eukaryotic Initiation Factors Gene Family	AT1G07930	91.4	7.9e-57	218.0
Chy09g00716	.	1	450	Eukaryotic Initiation Factors Gene Family	AT1G07940	95.6	1.2e-253	872.1
Chy05g00564	.	1	446	Eukaryotic Initiation Factors Gene Family	AT1G07940	96.2	4.6e-253	870.2
Chy09g00715	.	1	450	Eukaryotic Initiation Factors Gene Family	AT1G07940	94.7	5.7e-251	863.2
Chy09g00713	.	1	450	Eukaryotic Initiation Factors Gene Family	AT1G07940	94.7	9.7e-251	862.4
Chy11g01323	.	1	294	Eukaryotic Initiation Factors Gene Family	AT1G07940	96.3	3.3e-166	581.6
Chy11g01324	.	1	116	Eukaryotic Initiation Factors Gene Family	AT1G07940	91.4	9.6e-57	218.0
Chy09g00716	.	1	450	Eukaryotic Initiation Factors Gene Family	AT5G60390	95.6	1.2e-253	872.1
Chy05g00564	.	1	446	Eukaryotic Initiation Factors Gene Family	AT5G60390	96.2	4.6e-253	870.2
Chy09g00715	.	1	450	Eukaryotic Initiation Factors Gene Family	AT5G60390	94.7	5.7e-251	863.2
Chy09g00713	.	1	450	Eukaryotic Initiation Factors Gene Family	AT5G60390	94.7	9.7e-251	862.4
Chy11g01323	.	1	294	Eukaryotic Initiation Factors Gene Family	AT5G60390	96.3	3.3e-166	581.6
Chy11g01324	.	1	116	Eukaryotic Initiation Factors Gene Family	AT5G60390	91.4	9.6e-57	218.0
Chy12g01174	.	1	225	Eukaryotic Initiation Factors Gene Family	AT5G12110	52.8	1.9e-48	189.5
Chy03g00237	.	861	1084	Eukaryotic Initiation Factors Gene Family	AT5G12110	52.8	1.2e-47	186.8
Chy12g01174	.	1	225	Eukaryotic Initiation Factors Gene Family	AT5G19510	61.1	7.9e-52	200.7
Chy03g00237	.	861	1084	Eukaryotic Initiation Factors Gene Family	AT5G19510	61.3	3.7e-49	191.8
Chy03g00237	.	864	1094	Eukaryotic Initiation Factors Gene Family	AT1G30230	76.2	1.0e-71	266.9
Chy12g01174	.	7	224	Eukaryotic Initiation Factors Gene Family	AT1G30230	77.4	2.4e-68	255.8
Chy03g00237	.	864	1084	Eukaryotic Initiation Factors Gene Family	AT2G18110	81.2	2.6e-74	275.4
Chy12g01174	.	4	225	Eukaryotic Initiation Factors Gene Family	AT2G18110	77.4	2.3e-70	262.3
Chy06g01649	.	1	410	Eukaryotic Initiation Factors Gene Family	AT1G57720	70.3	6.1e-167	583.9
Chy06g01650	.	1	411	Eukaryotic Initiation Factors Gene Family	AT1G57720	76.1	5.2e-166	580.9
Chy11g01016	.	160	1003	Eukaryotic Initiation Factors Gene Family	AT1G56070	94.0	0.0e+00	1604.7
Chy11g00990	.	1	844	Eukaryotic Initiation Factors Gene Family	AT1G56070	94.0	0.0e+00	1604.3
Chy11g00992	.	1	844	Eukaryotic Initiation Factors Gene Family	AT1G56070	93.8	0.0e+00	1603.6
Chy01g00999	.	1	1036	Eukaryotic Initiation Factors Gene Family	AT3G22980	71.0	0.0e+00	1434.5
Chy11g01845	.	1	434	Eukaryotic Initiation Factors Gene Family	AT5G47880	88.0	2.0e-221	765.0
Chy08g00780	.	1	434	Eukaryotic Initiation Factors Gene Family	AT5G47880	87.8	2.7e-221	764.6
Chy08g00780	.	4	437	Eukaryotic Initiation Factors Gene Family	AT1G12920	89.9	2.2e-228	788.1
Chy11g01845	.	4	437	Eukaryotic Initiation Factors Gene Family	AT1G12920	89.2	9.4e-227	782.7
Chy08g00780	.	1	437	Eukaryotic Initiation Factors Gene Family	AT3G26618	90.8	6.3e-231	796.6
Chy11g01845	.	1	437	Eukaryotic Initiation Factors Gene Family	AT3G26618	90.6	1.2e-229	792.3
Chy04g00309	.	12	654	Eukaryotic Initiation Factors Gene Family	AT5G10630	58.4	6.5e-203	704.1

Syn-Orthogroups

Select	Orthogroup	Bda	Bhi	Blo	Bma	Bpe	Cam	Car	Cco	Cec	Chy	Cla	Clacu	Cma	Cme	Cmetu	Cmo	Cmu	Cone	Cpe	Cre	Csa	HCH	Hepe	Lac	Lcy	Lsi	Mch	Sed	Tan	Vvi	Total
	OG0001065	2	2	2	3	2	3	0	3	2	3	3	3	3	4	3	2	3	3	3	2	3	3	3	2	3	3	3	4	5	1	81

Transcriptome

Select	Gene	Chr	Type	da1	da2	da3	da4	da5	da6	da7	da8	da9	da10
	Chy11g00992	Chy_Chr11	FPKM	45.04763	48.158066	21.512186	22.705545	38.982792	37.164551	37.375351	29.367329	30.174702	26.569189