Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy11g01004 | ATGCAACAGAATTCAACCGAAGTGGAGTTCTTTTCTGATTATGGCGATGCCAGTAGATACAAAATTCAGGAAGTAATTGGCAAAGGAAGCTATGGGGTTGTCTGTTCTGCAATTGACACCCACACCGGTGACAAGGTTGCAATAAAGAAGATTCACAATATCTTTGAGCATATATCTGATGCGGTTAGAATTCTTCGTGAGATAAAGCTGCTTAGACTTCTTCGCCATCCTGATATTGTTGAAATTAAACACATTATGCTGCCACCTTCAAGGAGGGATTTCAAAGACATCTATGTTGTTTTTGAGCTGATGGAATCAGATCTCCACCAAGTTATTAAAGCAAATGATGATCTGACTCGAGAACATTATCAGTTTTTCCTTTACCAACTTCTTCGTGCATTAAAATATATCCATACAGCTAATGTCTACCACCGTGATTTAAAACCAAAGAATATATTAGCAAATGCAAATTGTAAACTTAAAATTTGTGATTTTGGATTGGCAAGAGTTGCGTTCAGTGACACACCAACAACAATTTTCTGGACGGATTATGTTGCTACTAGATGGTACAGAGCTCCGGAGCTATGTGGTTCATTTTTCTCCAAGTATACACCTGCAATTGATATATGGAGTATTGGTTGCATATTTGCCGAAGTATTGATGGGGAAACCACTTTTTCCTGGTAAAAACGTTGTACACCAGCTCGATTTGATGACGGATCTCCTTGGAACTCCTTCATTAGATACAATTTCCAGGGTACGTAATGACAAGGCTAGAAGATATTTAACTACTATGAGAAAAAAGCAGCCGGTGCCATTTTCTCAAAAGTTCCCAAATGCAGATCCTTTAGCACTGAGGCTACTGGAAAGACTGCTTGCTTTTGATCCAAAAGATAGACCAACTGCTGAAGAGGCACTGGCTGATCCATACTTCAAGGGGTTGGCAAAAATTGAGAGGGAACCTTCCTGCCAGCCAATCACAAAAATGGAATTTGAATTTGAGAGACGGAGGGTCACTAAAGAAGACATTCAGGAACTAATCTTCCGGGAGATATTAGAATATCATCCACAGCTACTAAAAGACTACATGAATGGGACTGAGAGAACAAATTTTTTATATCCAAGTGCTGTCGATCAATTTAGAAAGCAGTTTGCTCATCTGGAGGAAAATGGTGGTAAAAGTGCACCGGTAATTCCTCTTGACAGAAAGCATGTGTCCCTTCCAAGGTCAACAGTTGTACACTCGAACCCGGTCTATTCTAAGGACCAAGTAAACAATATACCCCTCCAAAATGGGAAGATCTCTGAAGACGCATACAGCAAAAATTCCCGAGATAGTGAAGGACGGCTAACAAATATATCGAGGACCATGCAGGCACCACAAAAAATCCCGTTTGCAGCTAAGCCTGGAAGAGTGGTAGGACCGGTTATAGCAGACGAGAATGGGAGGCTAGTGAAGGAACCATATGATCCAAGAACGTTGATCAGAGGTGCCATTCTTCCTCCTGCATATCACTACCACCAAAAACCTATTGTTGGAAATCAAGAAAGATCTGCAGCAGAAACCAAACTCGATATTTCTTTAAGGGCTGCTAAGCAAGCATCCCAGTGCGGCATGGCTTCCAAATTAGGATCAGATATAGCCATCAGTATTGACTCAAACCCTTTTTACATGACACGTGCCGGAGTGAACAAGGTCGAACTCAAGGACCAAATATCCATCAATGCAAACTTTCTGCAGGCCAAAGCCGCCCAATACGGTGGTCTTAGTGCAGCAACAGCCACCACCACATCGGTTGCTCACAGAAAGGTGGTTGCTGGTCAGTTTAACATGACAAAGATGTACTAA | 1848 | 41.61 | MQQNSTEVEFFSDYGDASRYKIQEVIGKGSYGVVCSAIDTHTGDKVAIKKIHNIFEHISDAVRILREIKLLRLLRHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLMGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTTMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAKIEREPSCQPITKMEFEFERRRVTKEDIQELIFREILEYHPQLLKDYMNGTERTNFLYPSAVDQFRKQFAHLEENGGKSAPVIPLDRKHVSLPRSTVVHSNPVYSKDQVNNIPLQNGKISEDAYSKNSRDSEGRLTNISRTMQAPQKIPFAAKPGRVVGPVIADENGRLVKEPYDPRTLIRGAILPPAYHYHQKPIVGNQERSAAETKLDISLRAAKQASQCGMASKLGSDIAISIDSNPFYMTRAGVNKVELKDQISINANFLQAKAAQYGGLSAATATTTSVAHRKVVAGQFNMTKMY* | 616 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 14174479 | 14178439 | - | Chy11G195840.1 | Chy11g01004 | 236765 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy11g01004 | 615 | ProSiteProfiles | Protein kinase domain profile. | 20 | 311 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy11g01004 | 615 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 6 | 490 | - | - | |
Chy11g01004 | 615 | ProSitePatterns | MAP kinase signature. | 55 | 158 | IPR003527 | GO:0004707|GO:0005524|GO:0006468 | |
Chy11g01004 | 615 | SMART | serkin_6 | 20 | 311 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy11g01004 | 615 | Gene3D | Phosphorylase Kinase; domain 1 | 35 | 357 | - | - | |
Chy11g01004 | 615 | Pfam | Protein kinase domain | 20 | 311 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy11g01004 | 615 | ProSitePatterns | Protein kinases ATP-binding region signature. | 26 | 50 | IPR017441 | GO:0005524 | |
Chy11g01004 | 615 | SUPERFAMILY | Protein kinase-like (PK-like) | 16 | 315 | IPR011009 | - | |
Chy11g01004 | 615 | CDD | STKc_TDY_MAPK | 19 | 356 | - | - | |
Chy11g01004 | 615 | Gene3D | Transferase(Phosphotransferase) domain 1 | 106 | 334 | - | - | |
Chy11g01004 | 615 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 6 | 490 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy05g00248 | Chy-Chr5:2100735 | Chy11g01004 | Chy-Chr11:14174479 | 0 | dispersed | |
Chy07g01000 | Chy-Chr7:14709450 | Chy11g01004 | Chy-Chr11:14174479 | 0 | dispersed | |
Chy11g01004 | Chy-Chr11:14174479 | Chy11g01438 | Chy-Chr11:21183907 | 0 | dispersed | |
Chy11g01004 | Chy-Chr11:14174479 | Chy02g02318 | Chy-Chr2:27194904 | 0 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
71556 | PF00069 | Pkinase | 1.20E-66 | CL0016 | Chy | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy11g01004 | - | - | csv:101216657 | 1192.56 |