Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy11g01010 | ATGCCTTTTGGGTCTCCATTGGCTAAACACGATTCGCTTTGTTTCCCTTTCTGGGTTCCTGGAGGAAGGGGCAAATCTGGGTCTATCTTTGATCACTACATGAGCTCAGTTGAAGTATTTGTAGTGGTGTTTATAAAGATCTCAGTCCTTAATCCTTATATCATACATGAATTTCTAGATGGGAATGTGTTGAAAATTAAGAGGTTGAACTTGAAGTTTCCTGTGGCTTGGAAATTTGGAACTTTAGTATACAGTGGATCAGATATGGCGTCTGGGAGTTCATTGAATGATCATTTATCCAAGAAGACTTCATTTTGGGGATTGTCATTATGGGTTTTGATCTGCATTTGCATTGGTGCATTTATAATTTTGATTCTTGGTTTGTTATCTATGTGGATCCTGTTTAGGAAAAAATCTAAAAGATCTATGGACAAATTCCCTAATTTTATAAAAGATATCAGGATAGATCAGGTTGGGATTCAAACTCCCAATGACCACCCTGAACATAGACTTCTTTCAGTTGATGTCAAAAGAAATGAGGAAAATTCAGAAGTTAGGACTGTAACAAAATCAAGTGAACCTGATAACAATAGCCAATGCAGCTCCACTTACCAACACGAAAAAGCTGGCAATTCACAATCTGGGGAAGAAGGAAGCTCTGGAAATGCTCGTAAGCAGGCTTCAAGGTCGTATGGAGGATTTGGAGGAGTTGTGCCACCGTCTCCTCTTGTTGGCTTGCCAGAAATTTCACATCTTGGGTGGGGCCACTGGTTCACTCTCAGGGATCTAGAGCTTGCAACTAATCGTTTTTCCACCGAAAATATTCTTGGGGAGGGAGGGTATGGGGTTGTGTATAAGGGCAGACTCATTAATGGCACTGAGGTTGCGGTGAAAAAACTTCTCAATAATCTGGGTCAGGCAGAGAAAGAATTTAGAGTTGAAGTGGAAGCTATTGGCCACGTTCGGCATAAGAATCTTGTCCGACTGCTGGGCTATTGCATAGAAGGAGTTCATAGGATGCTAGTATATGAATATGTGAACAATGGAAATCTAGAACAGTGGCTACATGGAGCCATGTGCCAACACGGCACGCTTACTTGGGAGGCTCGCATGAAGGTGCTTCTTGGCACTGCTAAAGCGCTTGCGTATTTACATGAAGCAATCGAGCCAAAAGTTGTTCACAGAGACATAAAATCAAGCAACATTTTGATTGATGATGAGTTCAATGCCAAAGTTTCTGATTTTGGATTGGCCAAACTCTTGGGCTCAGGAGAGAGTCATATCACAACTAGAGTTATGGGGACATTTGGGTATGTGGCGCCAGAATATGCAAATACAGGCTTGTTGAATGAAAAGAGTGACATTTATAGCTTCGGTGTTCTCTTGCTAGAAGCAATTACAGGGAGGGATCCTGTGGATTATGCACGTCCTTCTAATGAGGTTAATCTGGTTGAGTGGCTAAAGATGATGGTAGCAACAAGGAGAGCAGAGGAAGTTGTGGACATGAACCTAGAGATCAAGCCAACTACTCGTGCTTTAAAACGTGCCCTTCTTGTTGCTCTTAGGTGTATTGATCCTGAATCAATCAAGAGACCCAAAATGAGTCATGTTGTAAGAATGCTTGAAGCCGATGAATTTCCACTCCACGAGGATAGGAGGAGCCGAAAAAGCCGATCAATAAGCTTGGAGATCGAGTCAATGAAAGAAATATCAGGTTCAGAGCAGACGGGTGGGCCGTCCGAGAGCCATAAATCAGAGACAAGCCATGAATAG | 1773 | 42.3 | MPFGSPLAKHDSLCFPFWVPGGRGKSGSIFDHYMSSVEVFVVVFIKISVLNPYIIHEFLDGNVLKIKRLNLKFPVAWKFGTLVYSGSDMASGSSLNDHLSKKTSFWGLSLWVLICICIGAFIILILGLLSMWILFRKKSKRSMDKFPNFIKDIRIDQVGIQTPNDHPEHRLLSVDVKRNEENSEVRTVTKSSEPDNNSQCSSTYQHEKAGNSQSGEEGSSGNARKQASRSYGGFGGVVPPSPLVGLPEISHLGWGHWFTLRDLELATNRFSTENILGEGGYGVVYKGRLINGTEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMCQHGTLTWEARMKVLLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLGSGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAITGRDPVDYARPSNEVNLVEWLKMMVATRRAEEVVDMNLEIKPTTRALKRALLVALRCIDPESIKRPKMSHVVRMLEADEFPLHEDRRSRKSRSISLEIESMKEISGSEQTGGPSESHKSETSHE* | 591 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 14271081 | 14275338 | - | Chy11G195900.1 | Chy11g01010 | 236771 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy11g01010 | 590 | ProSitePatterns | Protein kinases ATP-binding region signature. | 276 | 299 | IPR017441 | GO:0005524 | |
Chy11g01010 | 590 | Coils | Coil | 290 | 310 | - | - | |
Chy11g01010 | 590 | MobiDBLite | consensus disorder prediction | 549 | 590 | - | - | |
Chy11g01010 | 590 | Pfam | Protein kinase domain | 271 | 538 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy11g01010 | 590 | SMART | serkin_6 | 270 | 524 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy11g01010 | 590 | PANTHER | OS10G0497600 PROTEIN | 91 | 584 | - | - | |
Chy11g01010 | 590 | CDD | STKc_IRAK | 276 | 542 | - | - | |
Chy11g01010 | 590 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 392 | 404 | IPR008271 | GO:0004672|GO:0006468 | |
Chy11g01010 | 590 | Gene3D | Transferase(Phosphotransferase) domain 1 | 346 | 558 | - | - | |
Chy11g01010 | 590 | MobiDBLite | consensus disorder prediction | 189 | 227 | - | - | |
Chy11g01010 | 590 | MobiDBLite | consensus disorder prediction | 179 | 232 | - | - | |
Chy11g01010 | 590 | PANTHER | OS01G0323000 PROTEIN | 91 | 584 | - | - | |
Chy11g01010 | 590 | MobiDBLite | consensus disorder prediction | 564 | 582 | - | - | |
Chy11g01010 | 590 | SUPERFAMILY | Protein kinase-like (PK-like) | 254 | 547 | IPR011009 | - | |
Chy11g01010 | 590 | MobiDBLite | consensus disorder prediction | 549 | 563 | - | - | |
Chy11g01010 | 590 | Gene3D | Phosphorylase Kinase; domain 1 | 252 | 345 | - | - | |
Chy11g01010 | 590 | ProSiteProfiles | Protein kinase domain profile. | 270 | 534 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy05g01011 | Chy-Chr5:14772801 | Chy11g01010 | Chy-Chr11:14271081 | 0 | dispersed | |
Chy06g00152 | Chy-Chr6:1007186 | Chy11g01010 | Chy-Chr11:14271081 | 1.01E-169 | dispersed | |
Chy11g01010 | Chy-Chr11:14271081 | Chy11g01610 | Chy-Chr11:22647691 | 0 | dispersed | |
Chy01g00887 | Chy-Chr1:8089751 | Chy11g01010 | Chy-Chr11:14271081 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
71557 | PF00069 | Pkinase | 3.90E-48 | CL0016 | Chy | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy11g01010 | - | - | csv:101214087 | 936.791 |