Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g01010 ATGCCTTTTGGGTCTCCATTGGCTAAACACGATTCGCTTTGTTTCCCTTTCTGGGTTCCTGGAGGAAGGGGCAAATCTGGGTCTATCTTTGATCACTACATGAGCTCAGTTGAAGTATTTGTAGTGGTGTTTATAAAGATCTCAGTCCTTAATCCTTATATCATACATGAATTTCTAGATGGGAATGTGTTGAAAATTAAGAGGTTGAACTTGAAGTTTCCTGTGGCTTGGAAATTTGGAACTTTAGTATACAGTGGATCAGATATGGCGTCTGGGAGTTCATTGAATGATCATTTATCCAAGAAGACTTCATTTTGGGGATTGTCATTATGGGTTTTGATCTGCATTTGCATTGGTGCATTTATAATTTTGATTCTTGGTTTGTTATCTATGTGGATCCTGTTTAGGAAAAAATCTAAAAGATCTATGGACAAATTCCCTAATTTTATAAAAGATATCAGGATAGATCAGGTTGGGATTCAAACTCCCAATGACCACCCTGAACATAGACTTCTTTCAGTTGATGTCAAAAGAAATGAGGAAAATTCAGAAGTTAGGACTGTAACAAAATCAAGTGAACCTGATAACAATAGCCAATGCAGCTCCACTTACCAACACGAAAAAGCTGGCAATTCACAATCTGGGGAAGAAGGAAGCTCTGGAAATGCTCGTAAGCAGGCTTCAAGGTCGTATGGAGGATTTGGAGGAGTTGTGCCACCGTCTCCTCTTGTTGGCTTGCCAGAAATTTCACATCTTGGGTGGGGCCACTGGTTCACTCTCAGGGATCTAGAGCTTGCAACTAATCGTTTTTCCACCGAAAATATTCTTGGGGAGGGAGGGTATGGGGTTGTGTATAAGGGCAGACTCATTAATGGCACTGAGGTTGCGGTGAAAAAACTTCTCAATAATCTGGGTCAGGCAGAGAAAGAATTTAGAGTTGAAGTGGAAGCTATTGGCCACGTTCGGCATAAGAATCTTGTCCGACTGCTGGGCTATTGCATAGAAGGAGTTCATAGGATGCTAGTATATGAATATGTGAACAATGGAAATCTAGAACAGTGGCTACATGGAGCCATGTGCCAACACGGCACGCTTACTTGGGAGGCTCGCATGAAGGTGCTTCTTGGCACTGCTAAAGCGCTTGCGTATTTACATGAAGCAATCGAGCCAAAAGTTGTTCACAGAGACATAAAATCAAGCAACATTTTGATTGATGATGAGTTCAATGCCAAAGTTTCTGATTTTGGATTGGCCAAACTCTTGGGCTCAGGAGAGAGTCATATCACAACTAGAGTTATGGGGACATTTGGGTATGTGGCGCCAGAATATGCAAATACAGGCTTGTTGAATGAAAAGAGTGACATTTATAGCTTCGGTGTTCTCTTGCTAGAAGCAATTACAGGGAGGGATCCTGTGGATTATGCACGTCCTTCTAATGAGGTTAATCTGGTTGAGTGGCTAAAGATGATGGTAGCAACAAGGAGAGCAGAGGAAGTTGTGGACATGAACCTAGAGATCAAGCCAACTACTCGTGCTTTAAAACGTGCCCTTCTTGTTGCTCTTAGGTGTATTGATCCTGAATCAATCAAGAGACCCAAAATGAGTCATGTTGTAAGAATGCTTGAAGCCGATGAATTTCCACTCCACGAGGATAGGAGGAGCCGAAAAAGCCGATCAATAAGCTTGGAGATCGAGTCAATGAAAGAAATATCAGGTTCAGAGCAGACGGGTGGGCCGTCCGAGAGCCATAAATCAGAGACAAGCCATGAATAG 1773 42.3 MPFGSPLAKHDSLCFPFWVPGGRGKSGSIFDHYMSSVEVFVVVFIKISVLNPYIIHEFLDGNVLKIKRLNLKFPVAWKFGTLVYSGSDMASGSSLNDHLSKKTSFWGLSLWVLICICIGAFIILILGLLSMWILFRKKSKRSMDKFPNFIKDIRIDQVGIQTPNDHPEHRLLSVDVKRNEENSEVRTVTKSSEPDNNSQCSSTYQHEKAGNSQSGEEGSSGNARKQASRSYGGFGGVVPPSPLVGLPEISHLGWGHWFTLRDLELATNRFSTENILGEGGYGVVYKGRLINGTEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMCQHGTLTWEARMKVLLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLGSGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAITGRDPVDYARPSNEVNLVEWLKMMVATRRAEEVVDMNLEIKPTTRALKRALLVALRCIDPESIKRPKMSHVVRMLEADEFPLHEDRRSRKSRSISLEIESMKEISGSEQTGGPSESHKSETSHE* 591
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 14271081 14275338 - Chy11G195900.1 Chy11g01010 236771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g01010 590 ProSitePatterns Protein kinases ATP-binding region signature. 276 299 IPR017441 GO:0005524
Chy11g01010 590 Coils Coil 290 310 - -
Chy11g01010 590 MobiDBLite consensus disorder prediction 549 590 - -
Chy11g01010 590 Pfam Protein kinase domain 271 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy11g01010 590 SMART serkin_6 270 524 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy11g01010 590 PANTHER OS10G0497600 PROTEIN 91 584 - -
Chy11g01010 590 CDD STKc_IRAK 276 542 - -
Chy11g01010 590 ProSitePatterns Serine/Threonine protein kinases active-site signature. 392 404 IPR008271 GO:0004672|GO:0006468
Chy11g01010 590 Gene3D Transferase(Phosphotransferase) domain 1 346 558 - -
Chy11g01010 590 MobiDBLite consensus disorder prediction 189 227 - -
Chy11g01010 590 MobiDBLite consensus disorder prediction 179 232 - -
Chy11g01010 590 PANTHER OS01G0323000 PROTEIN 91 584 - -
Chy11g01010 590 MobiDBLite consensus disorder prediction 564 582 - -
Chy11g01010 590 SUPERFAMILY Protein kinase-like (PK-like) 254 547 IPR011009 -
Chy11g01010 590 MobiDBLite consensus disorder prediction 549 563 - -
Chy11g01010 590 Gene3D Phosphorylase Kinase; domain 1 252 345 - -
Chy11g01010 590 ProSiteProfiles Protein kinase domain profile. 270 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g01011 Chy-Chr5:14772801 Chy11g01010 Chy-Chr11:14271081 0 dispersed
Chy06g00152 Chy-Chr6:1007186 Chy11g01010 Chy-Chr11:14271081 1.01E-169 dispersed
Chy11g01010 Chy-Chr11:14271081 Chy11g01610 Chy-Chr11:22647691 0 dispersed
Chy01g00887 Chy-Chr1:8089751 Chy11g01010 Chy-Chr11:14271081 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71557 PF00069 Pkinase 3.90E-48 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g01010 - - csv:101214087 936.791