Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy11g01011 | ATGGCAGCTTCATCCATGGCTCTCTCCTCCCCATCCTTCGCCGGCCAAGCCGTCAAATTATCCCCCACCTCCTCCGACCTCCTCGGCGAAGGCCGCATTACCATGAGAAAAACCGCCGGAAAGCCCAAGCCCGTTTCCTCCGGTAGCCCATGGTACGGTCCCGATCGTGTCAAATACCTAGGCCCATTCTCTGGAGAACCCCCATCCTATCTAACCGGAGAATTCCCCGGTGACTACGGTTGGGACACTGCCGGCCTCTCCGCCGACCCCGAAACCTTCGCCAAAAACCGTGAACTCGAAGTAATCCACTCGAGATGGGCCATGCTCGGAGCCTTAGGCTGCGTATTCCCGGAGCTCCTCTCCCGAAACGGAGTCAAATTCGGCGAGGCTGTGTGGTTCAAAGCTGGATCACAAATCTTCAGCGAAGGTGGGCTCGACTATTTGGGGAACCCAAGCTTGGTGCACGCACAGAGCATTCTAGCGATTTGGGCATGTCAAGTAGTGCTCATGGGCGCAGTGGAAGGGTACAGAATTGCTGGGGGTCCGTTGGGTGAAATCACTGACCCGATTTACCCAGGTGGGAGCTTTGATCCATTGGGGCTGGCTGATGATCCAGAGGCATTCGCGGAATTGAAAGTGAAGGAGCTTAAGAATGGTAGATTGGCTATGTTTTCGATGTTCGGATTTTTCGTACAAGCGATTGTAACTGGGAAAGGGCCATTGGAGAATTTGGCTGATCACTTGGCTGACCCTGTTAACAACAATGCTTGGGCCTATGCTACTAACTTTGATGGACACAAAATTATTGGTGCCAAAAGAACTAGTGAGGCTAGCTCTTCAAAAGGTCAAGATGATAAGAAAACTAAATTTGAATCTAGAAGAAACAAAAGAGCTAGGAAAGCTACTTCTTTTGGATTAGATTTCATAATATACATGATAGAAGTGATAGTGTTGGTTGAGTCGGCATGTCGATTACTCATCATGCAGTCTGATTGA | 996 | 50.1 | MAASSMALSSPSFAGQAVKLSPTSSDLLGEGRITMRKTAGKPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFDGHKIIGAKRTSEASSSKGQDDKKTKFESRRNKRARKATSFGLDFIIYMIEVIVLVESACRLLIMQSD* | 332 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 14276644 | 14289144 | - | Chy11G195910.1 | Chy11g01011 | 236772 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy11g01011 | 331 | Gene3D | Chlorophyll a/b binding protein domain | 58 | 260 | - | - | |
Chy11g01011 | 331 | MobiDBLite | consensus disorder prediction | 274 | 294 | - | - | |
Chy11g01011 | 331 | Pfam | Chlorophyll A-B binding protein | 67 | 233 | IPR022796 | - | |
Chy11g01011 | 331 | PANTHER | CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC | 1 | 264 | - | - | |
Chy11g01011 | 331 | PANTHER | CHLOROPHYLL A/B BINDING PROTEIN | 1 | 264 | IPR001344 | GO:0009765|GO:0016020 | |
Chy11g01011 | 331 | SUPERFAMILY | Chlorophyll a-b binding protein | 50 | 263 | - | - | |
Chy11g01011 | 331 | MobiDBLite | consensus disorder prediction | 278 | 294 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy01g00514 | Chy-Chr1:3707462 | Chy11g01011 | Chy-Chr11:14276644 | 2.71E-150 | dispersed | |
Chy02g00167 | Chy-Chr2:1173807 | Chy11g01011 | Chy-Chr11:14276644 | 2.38E-148 | dispersed | |
Chy04g01189 | Chy-Chr4:18266412 | Chy11g01011 | Chy-Chr11:14276644 | 2.42E-168 | dispersed | |
Chy06g01728 | Chy-Chr6:20138010 | Chy11g01011 | Chy-Chr11:14276644 | 2.36E-118 | dispersed | |
Chy11g01011 | Chy-Chr11:14276644 | Chy10g00781 | Chy-Chr10:13858504 | 5.42E-37 | dispersed | |
Chy07g00436 | Chy-Chr7:3342271 | Chy11g01011 | Chy-Chr11:14276644 | 3.88E-22 | transposed | |
Chy09g00113 | Chy-Chr9:941941 | Chy11g01011 | Chy-Chr11:14276644 | 8.39E-67 | transposed | |
Chy07g00435 | Chy-Chr7:3334144 | Chy11g01011 | Chy-Chr11:14276644 | 3.49E-31 | transposed | |
Chy11g01011 | Chy-Chr11:14276644 | Chy02g00166 | Chy-Chr2:1171702 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy11g01011 | K08912 | - | csv:101213845 | 536.569 |