Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g01027 ATGCATATGGAGAATTTATCTTCTAGTGATCTATCACATTCGGCAATGTATGAAAATAGTGATTCGAAGCACTCACAGGATGGGTTGGAGGATGGCTCTCGATGGTATTTTTCTAGGAAGGAATTAGAGGAATTTTCACCTTCTAAACAAGATGGGATTGACTTGAAAAAGGAGACATATTTACGCAAATCATACTGTACATTTCTTCAAGATTTGGGAATGAGACTTAAAGTTCCCCAGGTAACCATTGCTACAGCAATAATTTTTTGCCATAGGTTCTTTCTTCGGCAATCTCATGCAAAGAATGACCGAAGGACAATTGCGACAGTGTGTATGTTTCTCGCAGGAAAGGTTGAAGAAACCCCTCGCCCGTTGAAGGACGTTATCATGGTCTCATATGAAATCATCAACAAAAAGGATCCTACTGCAGCCCAGAAAATTAGGCAAAAGGAGGTGTATGAACGGCAAAAAGAGTTAATTTTACTTGGGGAGAGGGTTGTTCTTGCAACTCTTGGTTTTGATCTTAATGTGCACCATCCTTACAAACCCCTTGTTGAGGCAATTAAAAAATTCAAAGTTGCTCAAAATGCCTTGGCTCAAGTAGCTTGGAATTTCGTCAATGATGGATTGCGGACATCTCTTTGCTTGCAATTTAAGCCTCACCATATTGCGGCCGGTGCCATTTTCCTTGCTGCCAAATTTCTCAAAGTTAAACTCCCATCAGATGGGGAAAAGGTGTGGTGGCAAGAGTTTGATGTCACCCCACGGCAATTGGAGGAAGTCAGCAATCAAATGTTAGAACTTTATGAACAAAATCGGTTACCGCCTTCTGGTGAAGCTGAGGGAAGCATTGGAGGTGGTCCTACTAATCAAACCCCTACAAAAGCTCCTACCAACAGCGAAGAACGCGCCATAGTAGACAATCATGCACTTGGTGTAGGTATTGCTACCTCAAGACTTGGAACCTCAAAAGCTGGTTCATCTAGGCCAGCATCTGAACACTCATTTGCAGGTGACCAGCCATCAAGAGCAATGCAGAATCATAGTATTGAAAGTTCGAATGTAGATTTTAGAAGTCCTTCCAATCATAAAACAGGTAGTGAATCTAAGGTTAGACAGGAGATGGAGCCATCGGCTTTCCATGACAAAGGAAACACTCAAAACTCACTAAAGCATCAGTCAGAGGGATTGGCTGAGCAAGACCACGGAAATGATATGAAAATGAATGAAGCAGCGACAAGGGATGCAATGGAATTGAAAGACAAACATGTAATTCGAAATATGGATTTTAGAGAAGTTACACTCGGAAAATCTCAGGACGTTATCAAAAAGATCGACAAGGACAAAGTAAAGGCTGCGCTTGAGAAACGAAGGAAGTCTCTTGGCAGCATGACCCAGAAAAAAGAATTGATGGATGAGGATGATCTCATTGAAAGGGAGTTGGAAGCTGGTGTTGAGATGGCTGTTGGCAGTGAGAAAAACAAGCGAGAACAGAAGCAAAGTTGGAATAAGTCATCAAATAAACAAGAATACGATGATTTGTATCGAGAGGACGATAAAGAGGAGCATCCTCAACGAACACGGCAGTCATCATATAATCTAGACTCTAGCAACATAGAAGAAGGGGAGTTTGCAAATGCTAATGAAGTCAGTTATGGGTATCAAGATTCCCCCAAGTCAAACAGTCATCAAGGGCTATGCTCTCTTGTGGATCCTCTTAGAATGTCAGCTTCTGCTATGCTTTTCATATCGAGTATGTCACAAAGCAGTGGGCCTGATTTCAATCTACCGGATGAGATTTTGGCGGTGATTCCAACGGATCCATATGATCAGCTCGACCTTGCGCGTAAAATCACCTCCATGGCGATTGCCTCTCGTGTGTCGAATCTTGAAGCTGAAATGATAAGAATGAAGCAAAAGCTTAAGGAGAAGGAAAAAACTATTTATGACCTGCAGGAGAAGATGTCTCACCTCGAGCACGCGAACCAGGAAGCTGAATCTAGGTTGAAGATTGCGCTTGATGATAATACGAGGCTTTCCAGGGAAAGAGATTCTCTATCAATGACTTCAAAGAAACTTGGACGTGATTTGGCAAAGCTGGAGACATTTAAGAGACAACTTATGCAATCATTAAGTGATGAATCCTCTCAAACTGAAACTGTTGATATTGGAACCTGTGATCAAGCAGTTCCTAAAGCATATACTGACAAGGATGAGGTAACTAATGGACACGCCACACATTCATTCGGTGGTTCCACAGAGACGGGAAGCACAATAGTTGAAGGAAAGCATATTGGACAAAGATTTTCATCGCCGTATATCACCCCAAGGTTCACTCCATCAGCGACTCCAAAAATTATTTCAACCAGTGTATCCCCCAGAGGGTATTCCACTGTTGCTTCTCCACAGATAATGTCTGGTTCAACTTCTCCAACAAAACACTCATACGATGGACGAATTGCACTATCTCCATGGTACCCATCAAGCCAGCAGTCTTCAGCAGCAAGTTCTCCTCCTCGTTCCCGTCAACTGTCTGGTCGAGCTGCACGGGTGGATGGCAAGGAGTTTTTTCGCCTAGCCAGGAGTCGTCTGTCACTAGAGCAGTTCAGTGCCTTCCTTTCGAACATAAAGGAACTCAATGCTCATAAGCAGACTAGAGAGGGGCTGGCTTGCAAGAGAACCCAGAAAAGTGATCATCATATGCTCCAAAATCAGCGTACGTTCACTTGCAAGCTATCTGCTCCATCACAACTCCAACTTGTCTAG 2766 43.02 MHMENLSSSDLSHSAMYENSDSKHSQDGLEDGSRWYFSRKELEEFSPSKQDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVIMVSYEIINKKDPTAAQKIRQKEVYERQKELILLGERVVLATLGFDLNVHHPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEEVSNQMLELYEQNRLPPSGEAEGSIGGGPTNQTPTKAPTNSEERAIVDNHALGVGIATSRLGTSKAGSSRPASEHSFAGDQPSRAMQNHSIESSNVDFRSPSNHKTGSESKVRQEMEPSAFHDKGNTQNSLKHQSEGLAEQDHGNDMKMNEAATRDAMELKDKHVIRNMDFREVTLGKSQDVIKKIDKDKVKAALEKRRKSLGSMTQKKELMDEDDLIERELEAGVEMAVGSEKNKREQKQSWNKSSNKQEYDDLYREDDKEEHPQRTRQSSYNLDSSNIEEGEFANANEVSYGYQDSPKSNSHQGLCSLVDPLRMSASAMLFISSMSQSSGPDFNLPDEILAVIPTDPYDQLDLARKITSMAIASRVSNLEAEMIRMKQKLKEKEKTIYDLQEKMSHLEHANQEAESRLKIALDDNTRLSRERDSLSMTSKKLGRDLAKLETFKRQLMQSLSDESSQTETVDIGTCDQAVPKAYTDKDEVTNGHATHSFGGSTETGSTIVEGKHIGQRFSSPYITPRFTPSATPKIISTSVSPRGYSTVASPQIMSGSTSPTKHSYDGRIALSPWYPSSQQSSAASSPPRSRQLSGRAARVDGKEFFRLARSRLSLEQFSAFLSNIKELNAHKQTREGLACKRTQKSDHHMLQNQRTFTCKLSAPSQLQLV* 922
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 14610199 14631440 - Chy11G196070.1 Chy11g01027 236788
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Chy11g01027 921 MobiDBLite consensus disorder prediction 1 30 - -
Chy11g01027 921 MobiDBLite consensus disorder prediction 319 405 - -
Chy11g01027 921 MobiDBLite consensus disorder prediction 827 847 - -
Chy11g01027 921 SUPERFAMILY Cyclin-like 32 177 IPR036915 -
Chy11g01027 921 MobiDBLite consensus disorder prediction 488 503 - -
Chy11g01027 921 SUPERFAMILY Cyclin-like 178 274 IPR036915 -
Chy11g01027 921 PANTHER CYCLIN 3 526 IPR043198 GO:0006357|GO:0016538
Chy11g01027 921 MobiDBLite consensus disorder prediction 274 300 - -
Chy11g01027 921 SMART cyclin_7 67 169 IPR013763 -
Chy11g01027 921 SMART cyclin_7 182 267 IPR013763 -
Chy11g01027 921 MobiDBLite consensus disorder prediction 320 362 - -
Chy11g01027 921 MobiDBLite consensus disorder prediction 827 843 - -
Chy11g01027 921 Coils Coil 627 682 - -
Chy11g01027 921 MobiDBLite consensus disorder prediction 509 528 - -
Chy11g01027 921 CDD CYCLIN 176 237 IPR013763 -
Chy11g01027 921 Gene3D - 177 277 - -
Chy11g01027 921 MobiDBLite consensus disorder prediction 363 379 - -
Chy11g01027 921 Gene3D - 26 175 - -
Chy11g01027 921 PANTHER - 3 526 - -
Chy11g01027 921 MobiDBLite consensus disorder prediction 488 539 - -
Chy11g01027 921 MobiDBLite consensus disorder prediction 1 22 - -
Chy11g01027 921 CDD CYCLIN 61 132 IPR013763 -
Chy11g01027 921 MobiDBLite consensus disorder prediction 380 394 - -
Chy11g01027 921 Pfam Cyclin, N-terminal domain 36 176 IPR006671 -
Chy11g01027 921 MobiDBLite consensus disorder prediction 284 300 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g01436 Chy-Chr3:17025822 Chy11g01027 Chy-Chr11:14610199 9.36E-115 dispersed
Chy05g00230 Chy-Chr5:1916879 Chy11g01027 Chy-Chr11:14610199 1.50E-66 dispersed
Chy06g00642 Chy-Chr6:4351888 Chy11g01027 Chy-Chr11:14610199 1.02E-46 dispersed
Chy08g01012 Chy-Chr8:17354859 Chy11g01027 Chy-Chr11:14610199 5.54E-38 dispersed
Chy11g00004 Chy-Chr11:64987 Chy11g01027 Chy-Chr11:14610199 2.00E-19 dispersed
Chy11g01027 Chy-Chr11:14610199 Chy12g00470 Chy-Chr12:5980086 1.97E-28 dispersed
Chy11g01027 Chy-Chr11:14610199 Chy11g01450 Chy-Chr11:21285075 4.38E-48 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g01027 K15188 - csv:101220862 1107.05