Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy11g01028 | ATGCCTATGGCTACTGCTCCCTTGAACAAAATTGAGCGAGCCCATCAGATGTACCGTGAAGGACTCTATGCCGAAGCTCTGAGATTCTACACTGAAGCCCTTTCCATGGCTAAGACCAAGTCCCAACGGATTGCTCTTCATAGTAACAGAGCTGCTTGCCATTTGAAACTTCATCATTTCAACAAGGCAGCAGAAGAATGTACATGGGTTCTTGAACTTGATCACAAGCATACTGGAGCTTTAATGCTTCGTGCTCAGACTCTTGTCACACTCAAGGAATATCATTCTGCTTTGTTTGATGTTAACAGACTTATTGAGTTGAATCCGTCATCAGAAGTTTATCAGAATCTTCACACTCGACTCAAGACGCAACTGAGATTTTTTTCTGCTCAAGGAAAGTCACTTGCTCCAATACCTGAATCAGAAGCAGAGCTTGAAGAAGAGGAGGAAGAAGAAGAATACGTTGATGAGTTCAATGAATATGCAGCCAATGAGAAGTGCATCGAGGGAAAAGAATATGTTGTTGCTCCGAGTTTTGAACAAGTACAGAAACCCGAGCATAATTGCAATTTGATTGAAAAGAAGATTATCAAGACCACTCAGGGTATCTGTGGATTATCTGAAGTAGAAAGGGTCAATCAGAAAGTTGAGGTAAAATTGACTACTAAAAGTGAAGTTGTTGCCCCTCAAGGACAGATTAAGAAGGGCACAACAACCCAAGGTCCCAATGGCTGGCAAACAATCCCAAAACCAAAAGGACACTCAGCTTTAGACTATGCACGTTGGGATAGAGTTGAGGATGATTCTAGTGAAGATGATGATGACGATGAAGAAGAAGACTCAGGACCTCAATTTCGTTTTCGTGTTAGAACCGTTGGTGTTAAACCTGTGAAATAA | 897 | 41.69 | MPMATAPLNKIERAHQMYREGLYAEALRFYTEALSMAKTKSQRIALHSNRAACHLKLHHFNKAAEECTWVLELDHKHTGALMLRAQTLVTLKEYHSALFDVNRLIELNPSSEVYQNLHTRLKTQLRFFSAQGKSLAPIPESEAELEEEEEEEEYVDEFNEYAANEKCIEGKEYVVAPSFEQVQKPEHNCNLIEKKIIKTTQGICGLSEVERVNQKVEVKLTTKSEVVAPQGQIKKGTTTQGPNGWQTIPKPKGHSALDYARWDRVEDDSSEDDDDDEEEDSGPQFRFRVRTVGVKPVK* | 299 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 14647236 | 14648622 | - | Chy11G196080.1 | Chy11g01028 | 236789 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy11g01028 | 298 | MobiDBLite | consensus disorder prediction | 232 | 298 | - | - | |
Chy11g01028 | 298 | PANTHER | TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN | 3 | 298 | - | - | |
Chy11g01028 | 298 | SUPERFAMILY | TPR-like | 11 | 124 | IPR011990 | GO:0005515 | |
Chy11g01028 | 298 | Gene3D | Tetratricopeptide repeat domain | 3 | 135 | IPR011990 | GO:0005515 | |
Chy11g01028 | 298 | SMART | tpr_5 | 44 | 77 | IPR019734 | GO:0005515 | |
Chy11g01028 | 298 | SMART | tpr_5 | 78 | 111 | IPR019734 | GO:0005515 | |
Chy11g01028 | 298 | SMART | tpr_5 | 7 | 40 | IPR019734 | GO:0005515 | |
Chy11g01028 | 298 | MobiDBLite | consensus disorder prediction | 232 | 246 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy11g01028 | Chy-Chr11:14647236 | Chy01g01423 | Chy-Chr1:19733043 | 9.08E-12 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy11g01028 | - | - | csv:101219918 | 519.62 |