Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g01028 ATGCCTATGGCTACTGCTCCCTTGAACAAAATTGAGCGAGCCCATCAGATGTACCGTGAAGGACTCTATGCCGAAGCTCTGAGATTCTACACTGAAGCCCTTTCCATGGCTAAGACCAAGTCCCAACGGATTGCTCTTCATAGTAACAGAGCTGCTTGCCATTTGAAACTTCATCATTTCAACAAGGCAGCAGAAGAATGTACATGGGTTCTTGAACTTGATCACAAGCATACTGGAGCTTTAATGCTTCGTGCTCAGACTCTTGTCACACTCAAGGAATATCATTCTGCTTTGTTTGATGTTAACAGACTTATTGAGTTGAATCCGTCATCAGAAGTTTATCAGAATCTTCACACTCGACTCAAGACGCAACTGAGATTTTTTTCTGCTCAAGGAAAGTCACTTGCTCCAATACCTGAATCAGAAGCAGAGCTTGAAGAAGAGGAGGAAGAAGAAGAATACGTTGATGAGTTCAATGAATATGCAGCCAATGAGAAGTGCATCGAGGGAAAAGAATATGTTGTTGCTCCGAGTTTTGAACAAGTACAGAAACCCGAGCATAATTGCAATTTGATTGAAAAGAAGATTATCAAGACCACTCAGGGTATCTGTGGATTATCTGAAGTAGAAAGGGTCAATCAGAAAGTTGAGGTAAAATTGACTACTAAAAGTGAAGTTGTTGCCCCTCAAGGACAGATTAAGAAGGGCACAACAACCCAAGGTCCCAATGGCTGGCAAACAATCCCAAAACCAAAAGGACACTCAGCTTTAGACTATGCACGTTGGGATAGAGTTGAGGATGATTCTAGTGAAGATGATGATGACGATGAAGAAGAAGACTCAGGACCTCAATTTCGTTTTCGTGTTAGAACCGTTGGTGTTAAACCTGTGAAATAA 897 41.69 MPMATAPLNKIERAHQMYREGLYAEALRFYTEALSMAKTKSQRIALHSNRAACHLKLHHFNKAAEECTWVLELDHKHTGALMLRAQTLVTLKEYHSALFDVNRLIELNPSSEVYQNLHTRLKTQLRFFSAQGKSLAPIPESEAELEEEEEEEEYVDEFNEYAANEKCIEGKEYVVAPSFEQVQKPEHNCNLIEKKIIKTTQGICGLSEVERVNQKVEVKLTTKSEVVAPQGQIKKGTTTQGPNGWQTIPKPKGHSALDYARWDRVEDDSSEDDDDDEEEDSGPQFRFRVRTVGVKPVK* 299
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 14647236 14648622 - Chy11G196080.1 Chy11g01028 236789
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Chy11g01028 298 MobiDBLite consensus disorder prediction 232 298 - -
Chy11g01028 298 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 3 298 - -
Chy11g01028 298 SUPERFAMILY TPR-like 11 124 IPR011990 GO:0005515
Chy11g01028 298 Gene3D Tetratricopeptide repeat domain 3 135 IPR011990 GO:0005515
Chy11g01028 298 SMART tpr_5 44 77 IPR019734 GO:0005515
Chy11g01028 298 SMART tpr_5 78 111 IPR019734 GO:0005515
Chy11g01028 298 SMART tpr_5 7 40 IPR019734 GO:0005515
Chy11g01028 298 MobiDBLite consensus disorder prediction 232 246 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy11g01028 Chy-Chr11:14647236 Chy01g01423 Chy-Chr1:19733043 9.08E-12 dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g01028 - - csv:101219918 519.62