Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g01033 ATGGGGAAAGGAAGAGCTCCATGTTGTGATAAGAATCAAGTGAAGAGAGGGCCATGGAGCCCTGCTGAAGATTTAAGGCTCATCACTTTCATCCAAACCCATGGCCATGATAATTGGAGAGCTCTCCCTAAACAAGCAGGATTGTTAAGGTGTGGGAAAAGTTGTCGACTAAGATGGATCAATTACCTTCGACCAGATGTGAAACGAGGAAATTTTACTGAAGATGAAGAGGAAACCATAATCAAGTTGCATAAAACTTGGGGAAACAAGTGGTCTAAAATTGCATCTCGTTTGCCAGGAAGAACGGACAATGAGATCAAGAACGTTTGGAACACACATCTAAAGAAGAGATTATCACCGACAACAAAAGTTATCTCCAACGATTCTGGTGATGAACCAAAAGAGTCATCTTCAACAACTTCTTCCTCCTCTTTCTCCTCTTCCTCCAGTTTAGTCTCCTCCAACCAAACTCAAAACATAGAGACAGAACAACTCAGCAAGACCAACTCCATTAACAACAATAACAACCTCTTTTGTCCCAAACCAAAAACAACCAGCTCTCTTTCAACTAACACCTCGAATTCAAATTCAAGTTGGCCTCAAAACCACTCTGATTTTGGAGAAGAAGTGGAGAAGAATAAAGAGAACAAACAATTGGAATTGGAATTGGAATCAGAATCTCAATCAAACACTATGGAAATTGAAATCCCATTGGAATTTGACAAAGATTTTTGGAACATGTTAGATTTAGACATAGATTTGTTCGAATCTAACGAAGTAGATCAAAATTATTGTCAAGGTTCAAACTTTGGAGCACAAAAAAACCAAGATTTCGAAAATCACAAATGGTTTAAGTATTTGGAGAACGAGTTGGGGTTGAACCGACCGCCTGAACCTGATGGTCGTGCCGGTGTTGACGACACGACCACAGAGGATCACAGGCTATTAGAGGATGATGTAGACCCTTGCGTGGCTTATTTTGCAGATGGGTTCACTCAACAACTTTAG 1008 40.28 MGKGRAPCCDKNQVKRGPWSPAEDLRLITFIQTHGHDNWRALPKQAGLLRCGKSCRLRWINYLRPDVKRGNFTEDEEETIIKLHKTWGNKWSKIASRLPGRTDNEIKNVWNTHLKKRLSPTTKVISNDSGDEPKESSSTTSSSSFSSSSSLVSSNQTQNIETEQLSKTNSINNNNNLFCPKPKTTSSLSTNTSNSNSSWPQNHSDFGEEVEKNKENKQLELELESESQSNTMEIEIPLEFDKDFWNMLDLDIDLFESNEVDQNYCQGSNFGAQKNQDFENHKWFKYLENELGLNRPPEPDGRAGVDDTTTEDHRLLEDDVDPCVAYFADGFTQQL* 336
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 14758767 14762088 + Chy11G196130.1 Chy11g01033 236794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g01033 335 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Chy11g01033 335 PANTHER - 1 194 - -
Chy11g01033 335 PANTHER - 179 295 - -
Chy11g01033 335 SMART sant 68 116 IPR001005 -
Chy11g01033 335 SMART sant 15 65 IPR001005 -
Chy11g01033 335 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 63 IPR017930 -
Chy11g01033 335 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 179 295 - -
Chy11g01033 335 CDD SANT 71 114 IPR001005 -
Chy11g01033 335 Gene3D - 70 145 - -
Chy11g01033 335 Gene3D - 16 68 - -
Chy11g01033 335 CDD SANT 18 63 IPR001005 -
Chy11g01033 335 MobiDBLite consensus disorder prediction 120 214 - -
Chy11g01033 335 Coils Coil 209 229 - -
Chy11g01033 335 MobiDBLite consensus disorder prediction 120 204 - -
Chy11g01033 335 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Chy11g01033 335 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 194 - -
Chy11g01033 335 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Chy11g01033 335 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Chy11g01033 335 Pfam Myb-like DNA-binding domain 69 114 IPR001005 -
Chy11g01033 335 SUPERFAMILY Homeodomain-like 14 110 IPR009057 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy11g01033 Chy-Chr11:14758767 Chy02g00346 Chy-Chr2:2232794 8.44E-60 dispersed
Chy11g01033 Chy-Chr11:14758767 Chy05g00321 Chy-Chr5:3206452 7.76E-63 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18734 PF00249 Myb_DNA-binding 4.10E-13 CL0123 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g01033 K09422 - csv:101202999 603.594