Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g01044 ATGCAGCTCCTTCAATCCCGCTTGATAAATTTTCTATCAATTTCTTCTTCACCGGCCGCCTCCACAATCCAAGAAATTGCTTCTGCTTGCCCCAAAGGTTTGGCTAAGGTTGTGCTGAAGAAGGGGAAGGCGCAGCTTTTCAAAGATGGGAGTCCAATGGTGTACAGTGGAGCTGTTGATAGAATAATTGGAAGGCCACCACCAAAAACTGGAGATGTTGTCCTGGTAGCGGATGGGACTGAAAAACCTATAGGATGGGGTCTGTATAATTCAGTTTCTATGTTCTCTGTTAGATTGATGCAGTTGGAAGAAGAGGCAGCTAGAGACCCTTCCTGCACTTTAAATGTTGAGAAGATGATTGAAACGAGGGTACATACTGCTAGAGAATTACGAAAGAACTTGGGGCTTCCGTCAGCTAGTACTAATGCTTATCGTCTTGTTAATAGTGAAGGAGACAGATTGTCAGGGCTGATTATCGATGTCTTTGGAGATTTAGCAGTGGTAGCATCATCTGCTGCTTGGGTGGAGAAGTACAAAGCTGAAATAGAGGACTGTGTCCGTGGAATTGAAGAAATCAACCATGTGAAATGGAGACCATCGGTGGACATTCTGAAAGAAGAAGGTATAAATGTGTCTGAATTAAAGGATACAAGTCCGTCTACTTGTGCTGAAAGAACAAAGGTGACAGAGAATGACATTTTCTATGCCATCTCACTTGAAGGCCAGAAAACAGGTTTTTATGCTGATCAGCGTGAAAATCGTCATTTTATCTCAACAATTTCGGAGGGTCAGAAAGTTCTTGATCTCTGCTGCTACAGTGGTGGGTTTTCTCTAAATGCATTACGTGGTGGAGCTATTAATGTCACTGGTATTGATTCGTCATTGCCTGCACTGGAGCTAGCAAAAGAAAATGTGGTCCTTAATAGCATGGATCCGGAAAGAATATCATTTCTGAAAGCGGATGCCACAGCATTCATGAAGGATGCCCTATCTAGGAATGAATCTTGGGATATAGTCATTTTGGATCCTCCTAAACTAGCACCACGGAAAAAGGTTTTGCAAACTGCATCAGGTATGTACAGGAATTTAAATTCATTGGCAATGCAACTCACAAGAAAAGGTGGTTTTCTCATGACTTGTTCATGTTCTGGAGCAATGACACAAAGTGGGATGTTCTTGCAAATACTTCAGGGTGCAGCATCAACGGCTAAAAAGAAAATTACGGTTCTACGACAAGCAGGAGCAGCATGTGATCACCCAATCGACCCTACTTATCCAGAGGGTGCTTATCTTTCTAACATTCTTCTACGAGTGCTATGA 1320 42.58 MQLLQSRLINFLSISSSPAASTIQEIASACPKGLAKVVLKKGKAQLFKDGSPMVYSGAVDRIIGRPPPKTGDVVLVADGTEKPIGWGLYNSVSMFSVRLMQLEEEAARDPSCTLNVEKMIETRVHTARELRKNLGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYKAEIEDCVRGIEEINHVKWRPSVDILKEEGINVSELKDTSPSTCAERTKVTENDIFYAISLEGQKTGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNALRGGAINVTGIDSSLPALELAKENVVLNSMDPERISFLKADATAFMKDALSRNESWDIVILDPPKLAPRKKVLQTASGMYRNLNSLAMQLTRKGGFLMTCSCSGAMTQSGMFLQILQGAASTAKKKITVLRQAGAACDHPIDPTYPEGAYLSNILLRVL* 440
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 14898237 14902278 + Chy11G196240.1 Chy11g01044 236805
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Chy11g01044 439 CDD AdoMet_MTases 265 380 - -
Chy11g01044 439 ProSiteProfiles PUA domain profile. 34 90 - -
Chy11g01044 439 Pfam S-adenosylmethionine-dependent methyltransferase 223 393 IPR019614 GO:0008168
Chy11g01044 439 Gene3D Vaccinia Virus protein VP39 226 439 IPR029063 -
Chy11g01044 439 Gene3D PUA domain 34 105 IPR036974 GO:0003723
Chy11g01044 439 Pfam PUA-like domain 37 100 IPR041532 -
Chy11g01044 439 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 123 434 IPR029063 -
Chy11g01044 439 CDD RlmI_M_like 120 209 - -
Chy11g01044 439 SMART pua_5 35 115 IPR002478 GO:0003723
Chy11g01044 439 PANTHER RIBOSOMAL RNA LARGE SUBUNIT METHYLTRANSFERASE 19 439 - -
Chy11g01044 439 Gene3D RNA methyltransferase domain (HRMD) like 116 216 - -
Chy11g01044 439 SUPERFAMILY PUA domain-like 36 104 IPR015947 -
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g01044 - - csv:101215914 837.41