Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g01045 ATGAGTTCGAATACCGCGTCGAGCTCGAACGATGCTTCATCTAATAGAAGGAATTCGAAACGACCTAAATATTCGAGGTTTACCCAGCAGGAGCTTCCAGCGTGTAAACCTATTCTCACACCAAGATGGGTGATTTCCGCATTCATGTTAGTTAGCATTATCTTTGTTCCCATTGGAGTTGCTTCCTTGTTTGCTTCCAGAGATGTCGTTGAAATAATCGATCGTTATGAAACTGAGTGTATACCAGAAAGGTTTAGAAACGATAAGGTTGGATTCATACAGGGCACTGCAAATAAAATTTGCCGCAGAAACATCACTGTGCCAAAACGTATGAAGCAACCAATATATGTCTATTACCAGCTTGACAATTTCTATCAGAATCACCGCAGATACGTGCAGAGCCGTAGTGATAAGCAATTGAGAGATCCTGGCAGCGAGCGTGATACAAGCTCTTGCAAACCTGAAGACAACTGGAATGGGCAGCCAGTTGTTCCATGTGGTTTGATAGCATGGAGTTTGTTTAATGATACCTACAACTTCGCCCTTAACAAAAAGCAAGTCGATGTTAATAAGGTCGGTATCTCATGGAAGAGTGACCGGGAACACAAATTCGGCAAGAATGTATTTCCCAAGAACTTTCAGAAAGGCAATATTACAGGAGGCAAAAAACTTAATGAAAGTGTACCATTAAGTCAACAAGAGGACCTTATTGTGTGGATGCGAACGGCTGCTCTCCCCACATTCAGAAAGTTATATGGAAAGATAGAAGTTGACCTTGAGAAGAATGATGTAATTGATGTGGTTTTGGAGAACAATTACAACACTTACAGTTTTAATGGCAAGAAAAAGCTTGTGCTTTCTACAACTAGCTGGCTTGGTGGGAAGAATGACTTTCTTGGCATTGCTTATCTTACTGTTGGTGGGTTATGCTTCTTTTTGGCAATGGCTTTCACAGTCGTCTATCTTGTTAAGCCAAGGCGACTTGGGGACCCATCATATCTGTCATGGAATAGAAACCCAAGTGGGCACTGA 1032 41.76 MSSNTASSSNDASSNRRNSKRPKYSRFTQQELPACKPILTPRWVISAFMLVSIIFVPIGVASLFASRDVVEIIDRYETECIPERFRNDKVGFIQGTANKICRRNITVPKRMKQPIYVYYQLDNFYQNHRRYVQSRSDKQLRDPGSERDTSSCKPEDNWNGQPVVPCGLIAWSLFNDTYNFALNKKQVDVNKVGISWKSDREHKFGKNVFPKNFQKGNITGGKKLNESVPLSQQEDLIVWMRTAALPTFRKLYGKIEVDLEKNDVIDVVLENNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLAMAFTVVYLVKPRRLGDPSYLSWNRNPSGH* 344
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 14902559 14905096 - Chy11G196250.1 Chy11g01045 236806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g01045 343 Pfam LEM3 (ligand-effect modulator 3) family / CDC50 family 63 327 IPR005045 GO:0016020
Chy11g01045 343 PANTHER CELL CYCLE CONTROL PROTEIN 50 3 342 IPR005045 GO:0016020
Chy11g01045 343 MobiDBLite consensus disorder prediction 1 15 - -
Chy11g01045 343 PANTHER ALA-INTERACTING SUBUNIT 3 3 342 - -
Chy11g01045 343 MobiDBLite consensus disorder prediction 1 26 - -
Chy11g01045 343 MobiDBLite consensus disorder prediction 135 153 - -
Chy11g01045 343 MobiDBLite consensus disorder prediction 135 156 - -
Chy11g01045 343 PIRSF Lem3/Cdc50 1 339 IPR005045 GO:0016020
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g01033 Chy-Chr6:8159923 Chy11g01045 Chy-Chr11:14902559 6.78E-168 dispersed
Chy11g01045 Chy-Chr11:14902559 Chy02g00124 Chy-Chr2:900731 1.41E-137 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g01045 - - csv:101216400 682.945