Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy11g01046 | ATGATCACGACGGTCACAGCTAGAGTAATCACAACAGCTCGATCATTGGTTCCATCCAGCCAGCTCTCTCTTCTACGTCCGTCTTCTTATGTCTTCGCTGCCCAGAAATCTCACTCCCACACCCTTCTCATTCGTCAGATGAGCTCGGAGGCGCAGAGCATCACTACTCGTCTTCACAGTTCTGGATTATTACGAAGCCAAGGTCTCATTGGAGGGAAGTGGATTGATGCTTATGATGGGAAGACCCTTAAGGTTCAAAATCCAGCTAATGGTGAAGTTATAACCAATGTTCCGCTCATGGGCAAAAGGGAGACCGATGATGCTATTTCATCAGCTTATGATGCTTTTAAGTCTTGGAGCAAGCTCACTGCAGCTGATCGGAGTAATCGACTACGCAAATGGTATGAGCTCCTAATGGCCCACAAAGAAGAGCTTGGACAACTGATAACCTTAGAGCAAGGAAAGCCCTTAAAGGAAGCTTTGGGTGAGACTAATTATGGAGCCAGCTTTATTGAGTTCTTTTCCGAAGAAGCAAAGCGAGTATACGGTGACATAATCTCACCAACTATAGCTGATCGTCGACTTTTGGTCTTGAAGCAGCCAGTTGGAGTTGTTGGCATCATTACCCCTTGGAACTTTCCGCTGGCTATGATTACACGGAAGGTTGGACCTGCTCTTGCAAGTGGTTGTACGGTGGTCATAAAACCCTCTGAGCTTACCCCCTTGACAGCTTTGGCAGCAGCTGAGCTCTCACTTCAAGCTGGAATTCCCCCGGGTGTCGTGAATGTGGTTATGGGAGATGCTCCTGCTATTGGGGATGCTATACTTGCAAGTTCTCAGGTAAGAAAGATCACGTTTACCGGCTCAACTGCAGTTGGAAAAAAGTTGATGGCAGGTGCTGCTGGAACTGTTAAAAGGGTGTCCTTTGAACTTGGTGGTAATGCCCCCTGCATAATATTTGACGATGCAGATGTGGATGTTGCAGTAAAAGGATCTATTGCAGCAAAGTTCCGAAATAGTGGACAGACTTGTGTTTGTGCCAATAGAATTCTTGTTCAAGAAGGAATATACGAGAAATTTACAAATGCTTTCTCAAAAGCGGTGCAAAATCTGCAAGTTGGAGACGGGTTTGGTGAAGGTGTAGCTCAGGGTCCTTTAATTAATGAAGCTGCCGTACAGAAGGTTGAGAAATTTCTTCAAGATGCCACTACAAAGGGAGCGAAAGTTCTTCTTGGTGGTAAAAGACACAGCCTTGGGATGACATTTTTTGAGCCTACAGTTGTTGCTGGCGTGAAAAGTGACATGCTTTTATCCAGGGAGGAAGTATTTGGTCCCGTGGCACCATTACTGCCATTCAGAACAGAGGAGGAAGCAATTGCTCTCGCAAACGACACCAATGCAGGATTAGCTGCTTACATATTCACAAATAATATTCAGCGTTCGTGGAGAGTGACTGAAGCTCTCGAATATGGAATGGTCGGTGTTAATGAAGGCCTAATTTCTACAGAGGTGGCTCCATTTGGGGGTGTTAAACAGTCAGGCCTTGGTAGGGAGGGGTCGAAATATGGGATGGACGAATATCTTGAGAAACATGTATGGACATCCATATTTTATTGA | 1617 | 45.52 | MITTVTARVITTARSLVPSSQLSLLRPSSYVFAAQKSHSHTLLIRQMSSEAQSITTRLHSSGLLRSQGLIGGKWIDAYDGKTLKVQNPANGEVITNVPLMGKRETDDAISSAYDAFKSWSKLTAADRSNRLRKWYELLMAHKEELGQLITLEQGKPLKEALGETNYGASFIEFFSEEAKRVYGDIISPTIADRRLLVLKQPVGVVGIITPWNFPLAMITRKVGPALASGCTVVIKPSELTPLTALAAAELSLQAGIPPGVVNVVMGDAPAIGDAILASSQVRKITFTGSTAVGKKLMAGAAGTVKRVSFELGGNAPCIIFDDADVDVAVKGSIAAKFRNSGQTCVCANRILVQEGIYEKFTNAFSKAVQNLQVGDGFGEGVAQGPLINEAAVQKVEKFLQDATTKGAKVLLGGKRHSLGMTFFEPTVVAGVKSDMLLSREEVFGPVAPLLPFRTEEEAIALANDTNAGLAAYIFTNNIQRSWRVTEALEYGMVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEYLEKHVWTSIFY* | 539 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 14923094 | 14948806 | + | Chy11G196260.1 | Chy11g01046 | 236807 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy11g01046 | 538 | ProSitePatterns | Aldehyde dehydrogenases cysteine active site. | 337 | 348 | IPR016160 | GO:0016491 | |
Chy11g01046 | 538 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 2 | 313 | 502 | IPR016163 | GO:0016620 | |
Chy11g01046 | 538 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 1 | 80 | 527 | IPR016162 | GO:0016491 | |
Chy11g01046 | 538 | PANTHER | SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL | 61 | 530 | - | - | |
Chy11g01046 | 538 | SUPERFAMILY | ALDH-like | 45 | 531 | IPR016161 | GO:0016491 | |
Chy11g01046 | 538 | Pfam | Aldehyde dehydrogenase family | 74 | 529 | IPR015590 | GO:0016491 | |
Chy11g01046 | 538 | ProSitePatterns | Aldehyde dehydrogenases glutamic acid active site. | 309 | 316 | IPR029510 | GO:0016491 | |
Chy11g01046 | 538 | CDD | ALDH_F5_SSADH_GabD | 85 | 529 | - | - | |
Chy11g01046 | 538 | PANTHER | SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL | 61 | 530 | - | - | |
Chy11g01046 | 538 | TIGRFAM | SSADH: succinate-semialdehyde dehydrogenase | 85 | 529 | IPR010102 | GO:0009013|GO:0009450 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy01g02162 | Chy-Chr1:26249458 | Chy11g01046 | Chy-Chr11:14923094 | 3.54E-63 | dispersed | |
Chy02g00769 | Chy-Chr2:4759868 | Chy11g01046 | Chy-Chr11:14923094 | 5.94E-52 | dispersed | |
Chy02g02570 | Chy-Chr2:28916466 | Chy11g01046 | Chy-Chr11:14923094 | 6.88E-110 | dispersed | |
Chy05g01239 | Chy-Chr5:16782046 | Chy11g01046 | Chy-Chr11:14923094 | 1.83E-59 | dispersed | |
Chy11g01046 | Chy-Chr11:14923094 | Chy11g01565 | Chy-Chr11:22174285 | 4.12E-51 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy11g01046 | K17761 | - | csv:101217352 | 984.556 |