Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy11g01047 | ATGTACCATGCCACCAAGAAACCTTCCTCTATGACTTCTCATGACAGGCCAATGTGTGTTCAAGGCGATTCCGGTCTCGTCCTCACCACCGACCCCAAACCCCGTCTCCGTTGGACCGTCGAGCTCCACGAGCGCTTTGTCGACGCTGTCACTCAACTTGGTGGCCCTGATAAAGCTACCCCTAAGACCATCATGCGGGTTATGGGTGTCAAGGGTCTCACTCTCTACCATCTCAAAAGTCATCTTCAGAAGTTCAGACTTGGAAAGCAACCTCACAAGGAATTCAATGATCAATCAATAAAGGATGGTATAAGAGCTTCAGCCTTGGAACTTCAGAGAAACAGTGGATCTTCTTCCACCTTAATGGACCGTAGTATGAACGAAATGCATATGGAGGTCCAGAGACGACTGCATGAACAAATTGAGGTACAAAGGCACCTTCAATTGAGAATTGAGGCTCAAGGCAAATACATGCAAAGTATACTGGAGAAAGCTTGCCAAACTCTCGCCGGCGAAAATATGGCCGCAGTCACCGCCGCCTCCGCCGGACCTTTCAAAACTACTTCCAACAATATGGGAACAACCACCAACCTTGTCTCAGACGCCGCCATCAAAGACTTCATTTCACCTCACCACACCTTCCCTCCTTTTCAAGACATGAACAACCTATTTAACTCTGACCCGCCACCACCTCCGCCGCCTCTCATTGACTGCCTCAAAAAGCCCAGCCCCTTCATCTCTGGGGCCGGTAAGACCCCCATTTTCTGGCCAGACGATCTCCGGCTCCAAGACTTAGGAACTCCTTCTGCCACCTTAGCACCCGCGCCCCCTCCCATCGGTGGCCCACCCGACTTGGATTCTCTACAGTTGGAAATGTATGAATCCAAACCGCCACCACCAACACCGCTACTCGCTGTTGGCAACAGCGCCATGAATGAGAAGAAGTTTGACATGACGTTAAAGCTCGAGAGACCATCCCCACCGCGATCGGGACATTCGGATGAAAGGGTGAATAATAATAATAATAATGGTATGGCTAACAATAACAACCCTACAATGTCACAGCCACAGGGAAGAAATTCTTCATTTGGTTAA | 1095 | 49.59 | MYHATKKPSSMTSHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDQSIKDGIRASALELQRNSGSSSTLMDRSMNEMHMEVQRRLHEQIEVQRHLQLRIEAQGKYMQSILEKACQTLAGENMAAVTAASAGPFKTTSNNMGTTTNLVSDAAIKDFISPHHTFPPFQDMNNLFNSDPPPPPPPLIDCLKKPSPFISGAGKTPIFWPDDLRLQDLGTPSATLAPAPPPIGGPPDLDSLQLEMYESKPPPPTPLLAVGNSAMNEKKFDMTLKLERPSPPRSGHSDERVNNNNNNGMANNNNPTMSQPQGRNSSFG* | 365 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 14949199 | 14952274 | + | Chy11G196270.1 | Chy11g01047 | 236808 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy11g01047 | 364 | MobiDBLite | consensus disorder prediction | 250 | 364 | - | - | |
Chy11g01047 | 364 | Pfam | Myb-like DNA-binding domain | 36 | 84 | IPR001005 | - | |
Chy11g01047 | 364 | Pfam | MYB-CC type transfactor, LHEQLE motif | 129 | 168 | IPR025756 | - | |
Chy11g01047 | 364 | SUPERFAMILY | Homeodomain-like | 32 | 88 | IPR009057 | - | |
Chy11g01047 | 364 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 33 | 88 | IPR006447 | GO:0003677 | |
Chy11g01047 | 364 | Gene3D | - | 32 | 90 | - | - | |
Chy11g01047 | 364 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 30 | 90 | IPR017930 | - | |
Chy11g01047 | 364 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR PHL11 | 2 | 226 | IPR044848 | GO:0003700 | |
Chy11g01047 | 364 | MobiDBLite | consensus disorder prediction | 332 | 364 | - | - | |
Chy11g01047 | 364 | MobiDBLite | consensus disorder prediction | 316 | 331 | - | - | |
Chy11g01047 | 364 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR APL | 2 | 226 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy06g00365 | Chy-Chr6:2434197 | Chy11g01047 | Chy-Chr11:14949199 | 4.30E-70 | dispersed | |
Chy11g01047 | Chy-Chr11:14949199 | Chy02g01741 | Chy-Chr2:18297676 | 7.64E-34 | dispersed | |
Chy04g00796 | Chy-Chr4:10249813 | Chy11g01047 | Chy-Chr11:14949199 | 4.24E-50 | transposed | |
Chy04g01368 | Chy-Chr4:20330154 | Chy11g01047 | Chy-Chr11:14949199 | 5.38E-59 | transposed | |
Chy05g00677 | Chy-Chr5:8623909 | Chy11g01047 | Chy-Chr11:14949199 | 2.78E-25 | transposed | |
Chy08g00372 | Chy-Chr8:8874263 | Chy11g01047 | Chy-Chr11:14949199 | 1.54E-31 | transposed | |
Chy01g00844 | Chy-Chr1:7393449 | Chy11g01047 | Chy-Chr11:14949199 | 1.16E-125 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
18735 | PF00249 | Myb_DNA-binding | 2.00E-06 | CL0123 | Chy | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy11g01047 | - | - | csv:101203721 | 687.567 |