Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g01051 ATGGGTAGCCGGGTCAGCTCGTCGGCTAAACGGAGCGACGGCGGTGTAAAGACCGGAAAAACGGGTGGCGTAGGGAAAGAAGCGTCGGTTAGGAAGGGTGACAGCGGCGTGGGAGGAAGTAGTCGTGGGAAGTCGTTGTGGCGGCCTGAGAAGAAGGTTTATTTTCCGAAGAAATATGGTTTCATAGCAGATAACTTCTCCTCTGTTGACCAGGTTACCTCCGCATTGAGGAAAGAAGGACTAGAATCGTCGAACCTCATCGTCGGAATTGATTTCACCAAAAGCAACGAATGGACAGGTGCAGTATCGTTCAATAAACGGAGCTTGCACGCTCTTTCCGATTCTCCTAATCCCTACCAGAAGGCTCTGTCCATCATCGGGAAAACTCTGGCTCCCTTCGATGAAGACGGCTTAATTCCTTGCTTCGGTTTCGGTGACGCTACGACGCACGATCAATTGGTGTTCAGTTTTCACAATGACAATTCACCATGCCATGGATTTGAAGAAGTTCTTGACTGTTACAAAAACATAATTCCCAATGCTCAACTTTCAGGACCAACTTCTTATGGTCCTGTTGTTGAAGCTGCAATGGATATTGTGGAGAAGAGTGGTGGGCAATTTCATATTCTTCTCATCGTTGCTGATGGACAGGTTACTCGAAGCTCCCTTGTTGGCGATGGTGAATTGAGCGTTCAAGAGGAGAAAACAATCAAAGCAATTGTCGATGCAAGTGCATATCCTCTTTCAATCATTCTTGTTGGAGTTGGAGATGGTCCTTGGGACGACATGAAGAAGTTTGACGACAAGATTCCAGCTCGGGATTTTGATAATTTCCAGTTTGTTAACTTCACTGAAATAATGTCGAAAAATATTGGCGTGGCGGAAAAAGAAGCAGCTTTTGCTTTAGCTGCATTAATGGAGGTTCCTTTCCAGTACAAAGCAGTCACAGAAATGGGTCTTATGGGACGCGTGACAGGGAAAACAACACATATTGTGCCACGACCCCCACCGACATGTTATACTCGTTCTACACGACTTACTTCTATACCAAGCAACACCTCCTCAGCTTCTGCATCTGATGAACATAGTCAGGTCTGCCCCATTTGCTTGACCGCGGGAAAGGACTTGGCCTTTGGATGCGGCCACATGGTTGAGAAACTGAACTATTTAATATCTACAAAACAGTTCTTTATTCACTACTTCAAAGACGTCACCTGCATACTTGTAGGGAATGTGGATCAAGATTGTCCAATTGCCATATATGTCGCCAGCCTATCAGAAACCGAATAA 1290 45.74 MGSRVSSSAKRSDGGVKTGKTGGVGKEASVRKGDSGVGGSSRGKSLWRPEKKVYFPKKYGFIADNFSSVDQVTSALRKEGLESSNLIVGIDFTKSNEWTGAVSFNKRSLHALSDSPNPYQKALSIIGKTLAPFDEDGLIPCFGFGDATTHDQLVFSFHNDNSPCHGFEEVLDCYKNIIPNAQLSGPTSYGPVVEAAMDIVEKSGGQFHILLIVADGQVTRSSLVGDGELSVQEEKTIKAIVDASAYPLSIILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSKNIGVAEKEAAFALAALMEVPFQYKAVTEMGLMGRVTGKTTHIVPRPPPTCYTRSTRLTSIPSNTSSASASDEHSQVCPICLTAGKDLAFGCGHMVEKLNYLISTKQFFIHYFKDVTCILVGNVDQDCPIAIYVASLSETE* 430
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 14999918 15006051 - Chy11G196310.1 Chy11g01051 236812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g01051 429 Pfam Copine 108 321 IPR010734 -
Chy11g01051 429 PANTHER COPINE FAMILY PROTEIN 1 43 384 - -
Chy11g01051 429 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RGLG4 43 384 - -
Chy11g01051 429 SMART VWA_4 83 286 IPR002035 -
Chy11g01051 429 SUPERFAMILY vWA-like 85 266 IPR036465 -
Chy11g01051 429 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy10g00832 Chy-Chr10:14255706 Chy11g01051 Chy-Chr11:14999918 1.08E-143 dispersed
Chy11g01051 Chy-Chr11:14999918 Chy06g00005 Chy-Chr6:22450 1.42E-19 dispersed
Chy11g01051 Chy-Chr11:14999918 Chy02g02625 Chy-Chr2:29377124 6.05E-148 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g01051 K16280 - csv:101218058 709.523