Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g01056 ATGTCGCCTATTTCAAATTTTTGTTTCTTCTTCTTCTTCCTCCTTTTCTTCTTCTTATCCTTCTCCTCCTCCTTCCTCTTTGCATTGGGCGACGAAGACAACAACTTCAACAACAATAATAATAATGACGACGAAGATGAGCAAGAGATAATCAAATTCGATCTACTTCACCGTCACCATCCACAAGTCGCGGAAAAGATTCACGGTGATATGAAAATCCAAGATGTAAACGAAAGAATGAAAGACATTCACGAACACGACCACAATCGTCACCGCTCCATCTCCAAATCGATGAACCAGAAGCAAGTTGAGGATGCGAGATTGAGGGCAGAGGCAGAGGCGGCGACAGAGGTAGAGGTAGCAAAGAGTGCAATACTTCCACCGGCAACGTCGACGCCGATAGGAATGAAAATGATTTCGGGTGCAGATTTTGGGAGTAGTGAGTATTTCGTACAGTTGAAGGTGGGAACGCCGGCGCAAACGTTTATGTTGATTGCGGATACAGGGAGTGATTTAACGTGGATGAAATGTAGATATCGGAGGTGTTTTGGGAATTGTAGCAGTAACGTGAATCATAAAAGCAAAAATGAAAAGAAACAGAGATTTAGACATGCGTTCTTGGCGAATCATTCGTCTTCTTTTAAGACGGTTTCTTGCAGCTCAACGATGTGTACCAATGATCTTGCGGATTTGTTTGCTGTTGCGGAATGCCACACCCCAAGTAGTCCTTGTGTCTATGATTACAGCTACACTGGAGGAGCAAGTGCAAAGGGTATATTCGCATGGGAGACTCTAACCGTAGGCTTAACAAACGGAAAAGAAAAACAACTCCTCAATTCCATAATTGGATGTACGGAATCCGTCCAAGGCAGCGTTTTCGGTGGTGCCGACGGCGTCATGGGCTTAGGCACTAGCTCCTATTCTTTAACCTACAAAGCCGCCGAAAACGCCAACGGCGGCGGCTTCTCTTACTGCCTTGTCGATCACCTCACCGATCAAAGAGCCATCAGTTACTTCGTCCTCGGCGTTCCGACCCCTTCCACTTCCGCCGCCACCTCCTCCGCCAAACTTCCCGCCAAAATGATCTACACCAAACTCTACGTCGGCGACCCTTACAGCAGCTTCTACGGCGTCGATCTCATCGGTATCTCCGCCAACGGCATCATGCTCAACATCCCTTCCCGTGTTTGGGACATTAATTCCGGCGGCGGTACCATCATCGATTCCGGTACTAGTCTCACTATACTTGCCGCTCCTGCTTTCGATATGGTAATGGAAGCTCTGACTCCGAGATTGAAGAAATTTCAGCAAATTGAAATCGATCCTTTCGATTTTTGCTTCAATAACAGCCAGTACACTCACGAAATGGCGCCGAAGCTCCGATTCCATTTCGGTGACGGGACGGTGTTTGAGCCGCCGACGAAAAGCTACATTGTGTCGGTGGGGGAATTCATTAGCTGTATTGGGTTCGTTTCAATGCCTTTTCCGGCGAACAATATCATTGGAAATATTCTTCAGCAAAATCACCTTTGGCAATTTGATTTCCAAAAGAGAAGAGTCGTAACTTTAAAACATACTACATAA 1584 46.28 MSPISNFCFFFFFLLFFFLSFSSSFLFALGDEDNNFNNNNNNDDEDEQEIIKFDLLHRHHPQVAEKIHGDMKIQDVNERMKDIHEHDHNRHRSISKSMNQKQVEDARLRAEAEAATEVEVAKSAILPPATSTPIGMKMISGADFGSSEYFVQLKVGTPAQTFMLIADTGSDLTWMKCRYRRCFGNCSSNVNHKSKNEKKQRFRHAFLANHSSSFKTVSCSSTMCTNDLADLFAVAECHTPSSPCVYDYSYTGGASAKGIFAWETLTVGLTNGKEKQLLNSIIGCTESVQGSVFGGADGVMGLGTSSYSLTYKAAENANGGGFSYCLVDHLTDQRAISYFVLGVPTPSTSAATSSAKLPAKMIYTKLYVGDPYSSFYGVDLIGISANGIMLNIPSRVWDINSGGGTIIDSGTSLTILAAPAFDMVMEALTPRLKKFQQIEIDPFDFCFNNSQYTHEMAPKLRFHFGDGTVFEPPTKSYIVSVGEFISCIGFVSMPFPANNIIGNILQQNHLWQFDFQKRRVVTLKHTT* 528
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 15081016 15083591 - Chy11G196360.1 Chy11g01056 236817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g01056 527 PANTHER OS07G0603500 PROTEIN-RELATED 11 518 - -
Chy11g01056 527 SUPERFAMILY Acid proteases 141 520 IPR021109 -
Chy11g01056 527 CDD pepsin_A_like_plant 148 520 IPR034161 -
Chy11g01056 527 Gene3D Acid Proteases 346 526 IPR021109 -
Chy11g01056 527 PANTHER ASPARTIC PROTEINASE NANA, CHLOROPLAST 11 518 - -
Chy11g01056 527 Pfam Xylanase inhibitor C-terminal 376 520 IPR032799 -
Chy11g01056 527 Pfam Xylanase inhibitor N-terminal 149 342 IPR032861 -
Chy11g01056 527 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 164 175 IPR001969 GO:0004190|GO:0006508
Chy11g01056 527 ProSiteProfiles Peptidase family A1 domain profile. 149 523 IPR033121 -
Chy11g01056 527 Gene3D Acid Proteases 132 342 IPR021109 -
Chy11g01056 527 PRINTS Pepsin (A1) aspartic protease family signature 155 175 IPR001461 GO:0004190|GO:0006508
Chy11g01056 527 PRINTS Pepsin (A1) aspartic protease family signature 405 416 IPR001461 GO:0004190|GO:0006508
Chy11g01056 527 PRINTS Pepsin (A1) aspartic protease family signature 499 514 IPR001461 GO:0004190|GO:0006508
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy11g01056 Chy-Chr11:15081016 Chy07g00551 Chy-Chr7:4691194 7.73E-38 dispersed
Chy11g01056 Chy-Chr11:15081016 Chy09g00907 Chy-Chr9:11865813 1.04E-61 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g01056 - - csv:101204452 930.243