Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g01062 ATGATTCTACGCTCACAATCCTCCTCTGTTTTCACGCTTTCCTCTTCAGTTGTTGACAATCACACGTTTAAGATTCACCGGCGGCAACTTCAGCTTCGTGATTACGGCGATGGCTGCCGTCACCGCCAGTTCCATGTTCGAGTTTCTAAAATTTTACTTTCGACGACTGCGGTTACGGTCGGTTCTACCAGCGGAAGTCTCGCTAGAAGGAAATCTAGGAATCGTTTTATCAATGTTAGGTCTTCTGCAAGTGCCTCCGATTTGCCCTCCACGACTCAGTCGCAGGATATTACAACTCCAGGTTCAGGTCCAGATAAGAATGAGGAAGCTCAGAGGCCTGGACCTGATCCGAAAATTCTTCTGAAGAGGTTTTGGAAAGTTGCCGCACCTTATTGGTTTTCGGATGATAAAGTGCAAGCTCGATGGCAGCTGGCTGCTGTCTTCGCTCTGACCTTGGGCACCACCGGCATCAGCGTTGGCTTCAATTTCCTTGGCCGCGACTTCTACAACGCTCTCGCTAACAAGGACCAAGAACAGTTCACTAAGCAACTCCTTTACTACCTAGGTGCCTTTGCTGGAGGTATTCCGGTTTTTGTATTGAGAGATTACGCAAAGGACATGCTTTCCCTTAGATGGAGGTCATGGATGACTAAACATTACATGGAGCGTTATCTAAAGGACCAGTCTTTCTATAAAATTCAGTCCCAATCCATTATTGATAATCCAGACCAGCGGATTGTTGATGATCTCAGTTCTTTCACAGGGACAGCTCTTTCATTTTCTTTGGCATTCTTCAATTCTACAGTGGATTTAATTTCATTTAGTAACATCTTATATGGTATCTATCCACCGTTGTTTGTTATTCTTCTTTTATATTCGATAGGAGGAACGGCAATCAGTGTTTTCCTCGGAAAGGGTTTGGTTAATTTGAACTTCTTGCAAGAAAAGAAAGAAGCAGATTTTCGCTATGGACTTGTACGCATTCGTGAAAATGCTGAATCAATTGCTTTCTATGGTGGTGAAGAGAATGAGATGCAGCTTATTCTGCAACGTTTTAGAAGTGCTGTTGAGAATTTAACTAAATTACTAATATCATCCAGAAATCTCGAGTTCTTTACCAATGGCTATCGCTACCTTATTCAAATTCTTCCAGCTGCTGTTGTTGCCCCCATGTACTTTTCAGGAAAAATTGAGTTTGGTGTTATTAATCAATCAGTATCTGCTTTCAATCACATCCTGGGGGATTTTTCCATCATTGTATATCAGTTTCAAGCCATCAGTGCTTTTTCAGCAATTATTGATCGCCTAGGTGAATTTGATGATCTCTTGGATGGCAGTGCCCCTAAAGCTCTCTCTAACATTTCAGAAAAGATACATCTTATGTACTCCCATATGGAAAATTCACCTCTACTAGAATCAAATGGGTCCATAGCCCCAGACAAACGCGACAAACGCCAGAAATTATTGGAGATAGAGAATATGACTTTAGGGGCACCAAATGGAGCAACTTTGGTGAGAGACTTGACGCTGATAGTTAAAGAAAAGGAGCATTTGCTGGTCATGGGACCTAGTGGATGTGGCAAGACTTCTTTGTTAAGAGTTTTGGCTGGACTTTGGAATATTGGAAAAGGAAAAATCACATTTTATATAAAAGACTATCCTGAGCAGTTAGTTTCTCAAGATGAAGGTCCCACTGGAGCACATACAGGAGAAGATGTATCCAAAGAAAATAGTAGACCACTCAACAAGAATTATCAAGGGATATTTTTTCTTCCTCAAAGACCATATATGGTTTTGGGTACACTACGTCAACAGCTGCTTTATCCTACATGGGCTGAAGGTTCTGTCACATCAGCAGGTCATGCTGAATCAAATGTATTCCCTTCCTTTTTGACAGGTGCGTCAAATATCAACAATGTTGGTGAAAATCCTGATAGGCCAACAACGGATGACCTAATCCAAGTCCTGGATAAAGTGGGTCTTGGCTACCTATTGACTCGTTTCAGTAGTCTGGACATAATTTGTGAATGGTCCAGTGTTCTTTCTCTCGGTGAGCAACAACGAATTGCTTTTGCACGTTTATTGCTTTCAAGACCAAAGTTAGTCCTGCTGGATGAGTCTACAAGCGCTTTAGATGAAGCGAATGAGGCACGTTTATACAAGCTAATCGCAGGTGCTGGGATAACATATATCAGCATTGCCCATCGACGAACTTTACGTAATCACCATAACAGTATTTTGCATATATCAAACTTGTCCGATGACAATCAACGCAACTGGAACATTGAACCCATTATTAGGGATGATTTGTACGAATTATCAAAGCAGTAA 2331 41.66 MILRSQSSSVFTLSSSVVDNHTFKIHRRQLQLRDYGDGCRHRQFHVRVSKILLSTTAVTVGSTSGSLARRKSRNRFINVRSSASASDLPSTTQSQDITTPGSGPDKNEEAQRPGPDPKILLKRFWKVAAPYWFSDDKVQARWQLAAVFALTLGTTGISVGFNFLGRDFYNALANKDQEQFTKQLLYYLGAFAGGIPVFVLRDYAKDMLSLRWRSWMTKHYMERYLKDQSFYKIQSQSIIDNPDQRIVDDLSSFTGTALSFSLAFFNSTVDLISFSNILYGIYPPLFVILLLYSIGGTAISVFLGKGLVNLNFLQEKKEADFRYGLVRIRENAESIAFYGGEENEMQLILQRFRSAVENLTKLLISSRNLEFFTNGYRYLIQILPAAVVAPMYFSGKIEFGVINQSVSAFNHILGDFSIIVYQFQAISAFSAIIDRLGEFDDLLDGSAPKALSNISEKIHLMYSHMENSPLLESNGSIAPDKRDKRQKLLEIENMTLGAPNGATLVRDLTLIVKEKEHLLVMGPSGCGKTSLLRVLAGLWNIGKGKITFYIKDYPEQLVSQDEGPTGAHTGEDVSKENSRPLNKNYQGIFFLPQRPYMVLGTLRQQLLYPTWAEGSVTSAGHAESNVFPSFLTGASNINNVGENPDRPTTDDLIQVLDKVGLGYLLTRFSSLDIICEWSSVLSLGEQQRIAFARLLLSRPKLVLLDESTSALDEANEARLYKLIAGAGITYISIAHRRTLRNHHNSILHISNLSDDNQRNWNIEPIIRDDLYELSKQ* 777
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 15137070 15144446 + Chy11G196420.1 Chy11g01062 236823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g01062 776 Coils Coil 767 776 - -
Chy11g01062 776 MobiDBLite consensus disorder prediction 81 105 - -
Chy11g01062 776 Gene3D - 477 758 IPR027417 -
Chy11g01062 776 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 489 776 IPR003439 GO:0005524
Chy11g01062 776 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 145 428 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Chy11g01062 776 MobiDBLite consensus disorder prediction 560 579 - -
Chy11g01062 776 Pfam ABC transporter 506 709 IPR003439 GO:0005524
Chy11g01062 776 SMART AAA_5 514 753 IPR003593 -
Chy11g01062 776 ProSitePatterns ABC transporters family signature. 681 695 IPR017871 GO:0005524
Chy11g01062 776 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 486 750 IPR027417 -
Chy11g01062 776 PANTHER ATP-BINDING CASSETTE, SUB-FAMILY D MEMBER 107 765 - -
Chy11g01062 776 MobiDBLite consensus disorder prediction 81 116 - -
Chy11g01062 776 Pfam ABC transporter transmembrane region 2 133 393 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Chy11g01062 776 Gene3D ABC transporter type 1, transmembrane domain 104 442 IPR036640 GO:0005524|GO:0016021
Chy11g01062 776 CDD ABCD_peroxisomal_ALDP 489 751 - -
Chy11g01062 776 PANTHER ATP-BINDING CASSETTE SUB-FAMILY D MEMBER 3 107 765 - -
Chy11g01062 776 SUPERFAMILY ABC transporter transmembrane region 118 439 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy07g00902 Chy-Chr7:12808693 Chy11g01062 Chy-Chr11:15137070 2.83E-47 dispersed
Chy11g01062 Chy-Chr11:15137070 Chy04g02045 Chy-Chr4:26039706 3.33E-14 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g01062 - - csv:101204943 1456.04