Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g01079 ATGAGGTGGAATACATTCTACACCAAAGCTTCTAATGTTTTTCATGATCATCCTTCCATCTCTAAGCTTCTCATTGTTTTCACTGTCAGTGGAGGTGGACTGGTAGCAGCTACTAATGGCAGATCTCTGTATCATTCTGTGTATGCCGATGCAGTCCAACAAGATGGTTACTGGAAGAAGAAGAAAGTAGTGGTGCTTGGAACAGGATGGGCTGGCACCAGTTTTTTGAAGAATCTCAAGAGTTCATCTTATGATGTTGATGTTATTTCTCCTCACAATTACTTTGCTTTTACCCCTTTGCTTCCTAGTGTCACGTGTGGCACGGTTGAAGCTCGCAGCATTGTTGAACCGATTCGTAGTATTACAAAGAAGAAAGGTCTGGATATTGAATTTAGGGAAGCTGAGTGCTATAAGATTGATGCAGAGAAAAAGGTGGTATTTTGTAGATCAAGTCAAGACACAAATTTGGGTGGCAGAGAAGAATTTTCTGTTGATTATGACTATCTGATTATAGCCATGGGAGCTAAATCCAACACTTTCAACACACCCGGAGTTGAGGAAAATGCTCACTTCTTGAAGGGAGTGGAAGATGCTCAGAGGATTCGTCAGACCGTAATCGATTGTTTTGAGAGAGCCAGCCTTCCAAATCTAAGTGAAGAAGAGAAGAAGAGAACTCTTCACTTTGTAATAGTTGGAGGTGGTCCAACTGGAGTGGAATTTGCAGCAGAGCTTCATGACTTTGCAGTTGAGGATTTAGCAGCATTGTATCCTGCATTGAAAGACTACGTGAAAATAACCCTCTTAGAGGCAGGAGATCATATTTTGAACATGTTTGACAAGAGAATTACTGCCTTTGCTGAAGAAAAATTTCAAAGAGATGGGATTGAACTAAAAACTGGTTCCATGGTCGTAAAAGTAACTGACAAGGAAATCTCCACAAAAGAAAGAGCAACCGGTGAATTTGTATCCATTCCTTATGGAATGGTTGTCTGGTCTACCGGCATAGGCCCTCGTCCTCAAGTCACTGATTTCATGAAGCAGATTGGTCAGACTAACAGAAGAGCTTTGGCAACTGATGAGTGGCTAAGGGTTGAAGGATGTGATGGTGTCTACGCTCTTGGTGATTGTGCCACTGTAAATCAAAGAAGAGTCATGGAAGATATTTCAGTAATATTCAGTAAGGCAGACAAGGATAAGTCAGGAGCTTTAGCCCTGCAAGAGTTTCAAGAAGTGGTAGGTGACATTTGTGAGAGGTACCCTCAAGTTGAGATCTATCTGAAGAAGAAGCAGATGAAGAACTTTGCAGCTTTGTTGAAGAAGACACAATCGGACACACAGAAACAGTCGACTGAACTGGATATTGAAAGCTTTAAGTCCTTACTTTCTGAAGTTGATTCTCAGATGAAAAATCTCCCTGCTACTGCTCAAGTTGCTGCTCAACAAGGTGAATATCTTGCAAGCTGCTTCAACCGGATGGATCAATGTGAAAAGTACCCTGAAGGCCCTCTCCGATTTCGAGGGACAGGACGCCACAGGTTTCATCCCTTCAGGTACAAGCATTTTGGGCAGTTTGCTCCTCTTGGGGGAGAACAAACTGCAGCTCAACTACCTGGGGATTGGATCTCGATTGGTCATAGCACTCAGTGGCTTTGGTACTCTGTTTATACCAGCAAGCTAGTAAGTTGGCGCACGAGGATTCTGGTCATCTCAGATTGGGGTAGAAGATTTGTATTTGGCAGGGATTCAAGCAGAATCTGA 1758 42.78 MRWNTFYTKASNVFHDHPSISKLLIVFTVSGGGLVAATNGRSLYHSVYADAVQQDGYWKKKKVVVLGTGWAGTSFLKNLKSSSYDVDVISPHNYFAFTPLLPSVTCGTVEARSIVEPIRSITKKKGLDIEFREAECYKIDAEKKVVFCRSSQDTNLGGREEFSVDYDYLIIAMGAKSNTFNTPGVEENAHFLKGVEDAQRIRQTVIDCFERASLPNLSEEEKKRTLHFVIVGGGPTGVEFAAELHDFAVEDLAALYPALKDYVKITLLEAGDHILNMFDKRITAFAEEKFQRDGIELKTGSMVVKVTDKEISTKERATGEFVSIPYGMVVWSTGIGPRPQVTDFMKQIGQTNRRALATDEWLRVEGCDGVYALGDCATVNQRRVMEDISVIFSKADKDKSGALALQEFQEVVGDICERYPQVEIYLKKKQMKNFAALLKKTQSDTQKQSTELDIESFKSLLSEVDSQMKNLPATAQVAAQQGEYLASCFNRMDQCEKYPEGPLRFRGTGRHRFHPFRYKHFGQFAPLGGEQTAAQLPGDWISIGHSTQWLWYSVYTSKLVSWRTRILVISDWGRRFVFGRDSSRI* 586
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 15466106 15469106 - Chy11G196590.1 Chy11g01079 236840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g01079 585 PANTHER - 5 585 - -
Chy11g01079 585 Gene3D - 459 569 - -
Chy11g01079 585 PRINTS Pyridine nucleotide disulphide reductase class-II signature 365 383 - -
Chy11g01079 585 PRINTS Pyridine nucleotide disulphide reductase class-II signature 223 247 - -
Chy11g01079 585 PRINTS Pyridine nucleotide disulphide reductase class-II signature 62 84 - -
Chy11g01079 585 SUPERFAMILY FAD/NAD(P)-binding domain 221 380 IPR036188 -
Chy11g01079 585 SUPERFAMILY FAD/NAD(P)-binding domain 60 279 IPR036188 -
Chy11g01079 585 SUPERFAMILY EF-hand 340 463 IPR011992 -
Chy11g01079 585 Pfam Pyridine nucleotide-disulphide oxidoreductase 61 387 IPR023753 GO:0016491
Chy11g01079 585 PRINTS FAD-dependent pyridine nucleotide reductase signature 166 184 - -
Chy11g01079 585 PRINTS FAD-dependent pyridine nucleotide reductase signature 355 377 - -
Chy11g01079 585 PRINTS FAD-dependent pyridine nucleotide reductase signature 227 245 - -
Chy11g01079 585 PRINTS FAD-dependent pyridine nucleotide reductase signature 63 82 - -
Chy11g01079 585 ProSiteProfiles EF-hand calcium-binding domain profile. 383 418 IPR002048 GO:0005509
Chy11g01079 585 PANTHER NADH DEHYDROGENASE 5 585 IPR045024 GO:0003954|GO:0006116
Chy11g01079 585 Gene3D - 51 436 - -
Chy11g01079 585 ProSitePatterns EF-hand calcium-binding domain. 396 408 IPR018247 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00375 Chy-Chr1:2672962 Chy11g01079 Chy-Chr11:15466106 0 dispersed
Chy02g00331 Chy-Chr2:2144396 Chy11g01079 Chy-Chr11:15466106 6.58E-14 dispersed
Chy08g00390 Chy-Chr8:9298035 Chy11g01079 Chy-Chr11:15466106 9.94E-10 dispersed
Chy11g01079 Chy-Chr11:15466106 Chy11g01357 Chy-Chr11:19846812 4.07E-63 dispersed
Chy11g01079 Chy-Chr11:15466106 Chy12g00977 Chy-Chr12:15050953 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g01079 K03885 - csv:101209855 1161.36