Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy11g01079 | ATGAGGTGGAATACATTCTACACCAAAGCTTCTAATGTTTTTCATGATCATCCTTCCATCTCTAAGCTTCTCATTGTTTTCACTGTCAGTGGAGGTGGACTGGTAGCAGCTACTAATGGCAGATCTCTGTATCATTCTGTGTATGCCGATGCAGTCCAACAAGATGGTTACTGGAAGAAGAAGAAAGTAGTGGTGCTTGGAACAGGATGGGCTGGCACCAGTTTTTTGAAGAATCTCAAGAGTTCATCTTATGATGTTGATGTTATTTCTCCTCACAATTACTTTGCTTTTACCCCTTTGCTTCCTAGTGTCACGTGTGGCACGGTTGAAGCTCGCAGCATTGTTGAACCGATTCGTAGTATTACAAAGAAGAAAGGTCTGGATATTGAATTTAGGGAAGCTGAGTGCTATAAGATTGATGCAGAGAAAAAGGTGGTATTTTGTAGATCAAGTCAAGACACAAATTTGGGTGGCAGAGAAGAATTTTCTGTTGATTATGACTATCTGATTATAGCCATGGGAGCTAAATCCAACACTTTCAACACACCCGGAGTTGAGGAAAATGCTCACTTCTTGAAGGGAGTGGAAGATGCTCAGAGGATTCGTCAGACCGTAATCGATTGTTTTGAGAGAGCCAGCCTTCCAAATCTAAGTGAAGAAGAGAAGAAGAGAACTCTTCACTTTGTAATAGTTGGAGGTGGTCCAACTGGAGTGGAATTTGCAGCAGAGCTTCATGACTTTGCAGTTGAGGATTTAGCAGCATTGTATCCTGCATTGAAAGACTACGTGAAAATAACCCTCTTAGAGGCAGGAGATCATATTTTGAACATGTTTGACAAGAGAATTACTGCCTTTGCTGAAGAAAAATTTCAAAGAGATGGGATTGAACTAAAAACTGGTTCCATGGTCGTAAAAGTAACTGACAAGGAAATCTCCACAAAAGAAAGAGCAACCGGTGAATTTGTATCCATTCCTTATGGAATGGTTGTCTGGTCTACCGGCATAGGCCCTCGTCCTCAAGTCACTGATTTCATGAAGCAGATTGGTCAGACTAACAGAAGAGCTTTGGCAACTGATGAGTGGCTAAGGGTTGAAGGATGTGATGGTGTCTACGCTCTTGGTGATTGTGCCACTGTAAATCAAAGAAGAGTCATGGAAGATATTTCAGTAATATTCAGTAAGGCAGACAAGGATAAGTCAGGAGCTTTAGCCCTGCAAGAGTTTCAAGAAGTGGTAGGTGACATTTGTGAGAGGTACCCTCAAGTTGAGATCTATCTGAAGAAGAAGCAGATGAAGAACTTTGCAGCTTTGTTGAAGAAGACACAATCGGACACACAGAAACAGTCGACTGAACTGGATATTGAAAGCTTTAAGTCCTTACTTTCTGAAGTTGATTCTCAGATGAAAAATCTCCCTGCTACTGCTCAAGTTGCTGCTCAACAAGGTGAATATCTTGCAAGCTGCTTCAACCGGATGGATCAATGTGAAAAGTACCCTGAAGGCCCTCTCCGATTTCGAGGGACAGGACGCCACAGGTTTCATCCCTTCAGGTACAAGCATTTTGGGCAGTTTGCTCCTCTTGGGGGAGAACAAACTGCAGCTCAACTACCTGGGGATTGGATCTCGATTGGTCATAGCACTCAGTGGCTTTGGTACTCTGTTTATACCAGCAAGCTAGTAAGTTGGCGCACGAGGATTCTGGTCATCTCAGATTGGGGTAGAAGATTTGTATTTGGCAGGGATTCAAGCAGAATCTGA | 1758 | 42.78 | MRWNTFYTKASNVFHDHPSISKLLIVFTVSGGGLVAATNGRSLYHSVYADAVQQDGYWKKKKVVVLGTGWAGTSFLKNLKSSSYDVDVISPHNYFAFTPLLPSVTCGTVEARSIVEPIRSITKKKGLDIEFREAECYKIDAEKKVVFCRSSQDTNLGGREEFSVDYDYLIIAMGAKSNTFNTPGVEENAHFLKGVEDAQRIRQTVIDCFERASLPNLSEEEKKRTLHFVIVGGGPTGVEFAAELHDFAVEDLAALYPALKDYVKITLLEAGDHILNMFDKRITAFAEEKFQRDGIELKTGSMVVKVTDKEISTKERATGEFVSIPYGMVVWSTGIGPRPQVTDFMKQIGQTNRRALATDEWLRVEGCDGVYALGDCATVNQRRVMEDISVIFSKADKDKSGALALQEFQEVVGDICERYPQVEIYLKKKQMKNFAALLKKTQSDTQKQSTELDIESFKSLLSEVDSQMKNLPATAQVAAQQGEYLASCFNRMDQCEKYPEGPLRFRGTGRHRFHPFRYKHFGQFAPLGGEQTAAQLPGDWISIGHSTQWLWYSVYTSKLVSWRTRILVISDWGRRFVFGRDSSRI* | 586 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 15466106 | 15469106 | - | Chy11G196590.1 | Chy11g01079 | 236840 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy11g01079 | 585 | PANTHER | - | 5 | 585 | - | - | |
Chy11g01079 | 585 | Gene3D | - | 459 | 569 | - | - | |
Chy11g01079 | 585 | PRINTS | Pyridine nucleotide disulphide reductase class-II signature | 365 | 383 | - | - | |
Chy11g01079 | 585 | PRINTS | Pyridine nucleotide disulphide reductase class-II signature | 223 | 247 | - | - | |
Chy11g01079 | 585 | PRINTS | Pyridine nucleotide disulphide reductase class-II signature | 62 | 84 | - | - | |
Chy11g01079 | 585 | SUPERFAMILY | FAD/NAD(P)-binding domain | 221 | 380 | IPR036188 | - | |
Chy11g01079 | 585 | SUPERFAMILY | FAD/NAD(P)-binding domain | 60 | 279 | IPR036188 | - | |
Chy11g01079 | 585 | SUPERFAMILY | EF-hand | 340 | 463 | IPR011992 | - | |
Chy11g01079 | 585 | Pfam | Pyridine nucleotide-disulphide oxidoreductase | 61 | 387 | IPR023753 | GO:0016491 | |
Chy11g01079 | 585 | PRINTS | FAD-dependent pyridine nucleotide reductase signature | 166 | 184 | - | - | |
Chy11g01079 | 585 | PRINTS | FAD-dependent pyridine nucleotide reductase signature | 355 | 377 | - | - | |
Chy11g01079 | 585 | PRINTS | FAD-dependent pyridine nucleotide reductase signature | 227 | 245 | - | - | |
Chy11g01079 | 585 | PRINTS | FAD-dependent pyridine nucleotide reductase signature | 63 | 82 | - | - | |
Chy11g01079 | 585 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 383 | 418 | IPR002048 | GO:0005509 | |
Chy11g01079 | 585 | PANTHER | NADH DEHYDROGENASE | 5 | 585 | IPR045024 | GO:0003954|GO:0006116 | |
Chy11g01079 | 585 | Gene3D | - | 51 | 436 | - | - | |
Chy11g01079 | 585 | ProSitePatterns | EF-hand calcium-binding domain. | 396 | 408 | IPR018247 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy01g00375 | Chy-Chr1:2672962 | Chy11g01079 | Chy-Chr11:15466106 | 0 | dispersed | |
Chy02g00331 | Chy-Chr2:2144396 | Chy11g01079 | Chy-Chr11:15466106 | 6.58E-14 | dispersed | |
Chy08g00390 | Chy-Chr8:9298035 | Chy11g01079 | Chy-Chr11:15466106 | 9.94E-10 | dispersed | |
Chy11g01079 | Chy-Chr11:15466106 | Chy11g01357 | Chy-Chr11:19846812 | 4.07E-63 | dispersed | |
Chy11g01079 | Chy-Chr11:15466106 | Chy12g00977 | Chy-Chr12:15050953 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy11g01079 | K03885 | - | csv:101209855 | 1161.36 |