Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy11g01095 | ATGGATTTCTCTCTCAAGTCTTTCAAATCTCATCCTTCTTACAAATATGTAAGGAAGCTTTCTGGAGCAGATACTACTCAAGATCATGAGCACCTTCCTATTCTTTCTGATCACCAACACTCCATAATGGCAGTTTCCGATTCATCTGATCGGAAAGAGGTTATCGTCAAGGTCGATGAGGCCGATGCTCCCAGTTTAAGAGCTACGAACTTGGTAAACGGAAGTGGCAGGATTTGGCGGGAGTCCAGCTATGATTTCTGGAATGATAGTGATAATAGACGGAGTTATGGCGAGGGTGGTGCTAAGACCACTGAAGATTTTGAGTTTAGGCATAGGAAGGATGTGGAAGATCCGCCCTCCAAGCTTATCGGGCAGTTTCTTCACAAACAGAAGGCGTCGGGAGAGATATCTTTAGATATGGATATGGAAATGCTGGAACTACCACAGGATAAGACTCCGCTTTCTACGGTGGCGGAATCTCCGATGCGACGGAGTTCGAGAGAGTTGAAGGTTTCCTTTGAGTCTATTTCAGAAATATCTGAAAACGATTCCATGCGAAGACGGCACAGAGACTCACCACTCGATGAAGAACATAGAGGTCAGCTTCCGAGGCAGTGTGATCGTCGTGCGCATGGCAGCAATGGTGAAGATGATGGTGCTGCTGAGGTATTGAGATGCTCATCCAATTCTTCCTTTCAAAGAGATGTATCGTTCCAGAGGAAATCTAGCTTGCTTAGGGCTAAAACTAAGTCTAGATTACTGGATCCACCCGAACACCAAGACCGGAGGTCAGGGCGTGTACCAAAATCAGGGCAAGTTCGCTCTGGTTTAATCTCAAAAGCCTTAGATGAGGAAGACGATGATCCATTCTTGGAAGAAGATCTTCCTGATGAGTATAAGAAGGCCAATCTAGGTGTTCTGACTCTGTTACAATGGGCGAGTTTGATTCTGATAATAGCAGCATTGGTTTGCACTTTAACAATTCGTTACTGGAGGAGAAAGAAACTATGGAAGCTTGAAGTATGGAAATGGGAGGTTATGATTCTTGTTCTAATATGTGGAAGACTTGTTTCTGGTTGGGGGATTAGGGTAATCGTCTTCTTTATTGAAAGAAACTTTCTACTTCGTAAGAGGGTTCTATACTTTGTTTATGGAGTCAGAAAGGCGGTCCAGAATTGTCTTTGGTTAGGTCTAGTTTTAATTGCTTGGAACTTCCTGTTTGATGACAAAGTTCAAAGAGAGGTAAAGAGCAATGCCTTAGAATATGTGACCAAAGTATTGGTATGTCTTCTTGTAAGCACTTTGGTTTGGCTAGTAAAAACACTGATGGTGAAGGTTTTGGCCTCTTCTTTCCATGTGAGTACATATTTTGATAGGATTCAAGATGCATTGTTTAACCAATATGTAATTGAGACACTGTCAGGTCCTCCATTGATAGAGATTCAAAAGAATGAGGAAGAAGAAGAGAGGCTTGCTGAAGAGGTTATAAAGTTACAGAATGCAGGGGCTACCATCCCTCCTGATTTAAAGGCAACTGCCTTTTCTACAGCTCAAAAGGGTGGGAGGGTGATAGGTAGTGGAGGGTTGCAAAAAAGTCCTCGTGGAAGAAGTGGCAAGTTATCTAGGACACTGTCGAAAAAGGGAGGCGATGAGGGTATAACAATTGATCACTTGCATAAGCTTAGTCCTAAGAATGTGTCTGCTTGGAATATGAAGAGATTGATGAACATTGTTAGACATGGGACCCTTTCAACTTTGGATGAACAGATTAAAGATACAGCTCATGAGGACGAATCAACCACACAGATCAAGAGTGAATATGAAGCAAAAGTTGCTGCGAAGAAGATTTTTCTGAACGTGGCTAGAAATGGTTCTAAATATATCTACCTAGAGGACTTGATGCGTTTCATGGAAAAAGACGAGGCTTCAAAAACCATGGGTCTCTTTGAAGGAGCATGTGAGAGTAGAAAAATAAGCAAATCATCCTTGAAAAACTGGGTGGTTAATGCCTTTAGAGAACGAAGGGCTTTAGCTTTGACATTGAACGATACCAAAACAGCAGTGAACAAACTTCACCGCATGGTGAATATTTTAGTTTCTGTCATTATTCTGGTTATTTGGCTATTGATTCTGGGTATTGCCACTAGCAAGTTTCTCCTATTCGTGACCTCTCAACTCGTCCTTGTTGCATTTGTATTTGGAAATACTTGCAAGACTGTTTTTGAATCAATCATCTTCTTATTCGTGATGCATCCATTTGACGTCGGAGACCGATGTGAAATTGATGGTGTGCAGATGATTGTTGAAGAAATGAACATTTTGACTACTATTTTTCTAAGATACGACAACCAGAAGATCATATTTCCGAACAGCGTTCTTGCAACAAAGGCTATCCACAACTTCTATCGTAGTCCTGACATGGGAGATGGTGTAGAATTCTGTCTTCACATATCTACTCCACCTGAGAAAATAGCTATCATGAGACAAAGAATAATAAGTTACATTGAGAGCAAGAAAGAGCATTGGTGTCCTGCGCCGATGATTGTCCTAAAGGATGTAGAAGAGTTAAATAGAATGAGAATAGCAATATGGCTTACTCATAGAATGAACCATCAAGACATGGGGGAGAGGTGGACAAGGAGAGCTCTTTTGGTCGAAGAACTCATTAAAATTTTCCAAGAGCTCGATTTGCAATACCGTCTCCTACCACTCGATATCAATGTTCGCTCCTTGCCTCCCGTGAACTCTACTAATCTTCCTCCAAGGTAA | 2769 | 41.71 | MDFSLKSFKSHPSYKYVRKLSGADTTQDHEHLPILSDHQHSIMAVSDSSDRKEVIVKVDEADAPSLRATNLVNGSGRIWRESSYDFWNDSDNRRSYGEGGAKTTEDFEFRHRKDVEDPPSKLIGQFLHKQKASGEISLDMDMEMLELPQDKTPLSTVAESPMRRSSRELKVSFESISEISENDSMRRRHRDSPLDEEHRGQLPRQCDRRAHGSNGEDDGAAEVLRCSSNSSFQRDVSFQRKSSLLRAKTKSRLLDPPEHQDRRSGRVPKSGQVRSGLISKALDEEDDDPFLEEDLPDEYKKANLGVLTLLQWASLILIIAALVCTLTIRYWRRKKLWKLEVWKWEVMILVLICGRLVSGWGIRVIVFFIERNFLLRKRVLYFVYGVRKAVQNCLWLGLVLIAWNFLFDDKVQREVKSNALEYVTKVLVCLLVSTLVWLVKTLMVKVLASSFHVSTYFDRIQDALFNQYVIETLSGPPLIEIQKNEEEEERLAEEVIKLQNAGATIPPDLKATAFSTAQKGGRVIGSGGLQKSPRGRSGKLSRTLSKKGGDEGITIDHLHKLSPKNVSAWNMKRLMNIVRHGTLSTLDEQIKDTAHEDESTTQIKSEYEAKVAAKKIFLNVARNGSKYIYLEDLMRFMEKDEASKTMGLFEGACESRKISKSSLKNWVVNAFRERRALALTLNDTKTAVNKLHRMVNILVSVIILVIWLLILGIATSKFLLFVTSQLVLVAFVFGNTCKTVFESIIFLFVMHPFDVGDRCEIDGVQMIVEEMNILTTIFLRYDNQKIIFPNSVLATKAIHNFYRSPDMGDGVEFCLHISTPPEKIAIMRQRIISYIESKKEHWCPAPMIVLKDVEELNRMRIAIWLTHRMNHQDMGERWTRRALLVEELIKIFQELDLQYRLLPLDINVRSLPPVNSTNLPPR* | 923 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 15977556 | 15981439 | + | Chy11G196750.1 | Chy11g01095 | 236856 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy11g01095 | 922 | MobiDBLite | consensus disorder prediction | 523 | 548 | - | - | |
Chy11g01095 | 922 | MobiDBLite | consensus disorder prediction | 180 | 218 | - | - | |
Chy11g01095 | 922 | MobiDBLite | consensus disorder prediction | 251 | 268 | - | - | |
Chy11g01095 | 922 | MobiDBLite | consensus disorder prediction | 149 | 220 | - | - | |
Chy11g01095 | 922 | Coils | Coil | 481 | 504 | - | - | |
Chy11g01095 | 922 | PIRSF | Memb_At2g17000 | 37 | 922 | IPR016688 | - | |
Chy11g01095 | 922 | PANTHER | MECHANOSENSITIVE ION CHANNEL PROTEIN 5 | 6 | 919 | IPR016688 | - | |
Chy11g01095 | 922 | MobiDBLite | consensus disorder prediction | 249 | 273 | - | - | |
Chy11g01095 | 922 | Gene3D | - | 752 | 801 | IPR023408 | - | |
Chy11g01095 | 922 | Pfam | Mechanosensitive ion channel | 694 | 896 | IPR006685 | GO:0016020|GO:0055085 | |
Chy11g01095 | 922 | PANTHER | MECHANOSENSITIVE ION CHANNEL PROTEIN | 6 | 919 | - | - | |
Chy11g01095 | 922 | SUPERFAMILY | Sm-like ribonucleoproteins | 742 | 801 | IPR010920 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy01g00654 | Chy-Chr1:4659404 | Chy11g01095 | Chy-Chr11:15977556 | 0 | dispersed | |
Chy05g00620 | Chy-Chr5:7539200 | Chy11g01095 | Chy-Chr11:15977556 | 1.53E-170 | dispersed | |
Chy07g00275 | Chy-Chr7:2150206 | Chy11g01095 | Chy-Chr11:15977556 | 5.46E-153 | dispersed | |
Chy07g00276 | Chy-Chr7:2155922 | Chy11g01095 | Chy-Chr11:15977556 | 1.99E-148 | dispersed | |
Chy11g01095 | Chy-Chr11:15977556 | Chy02g01258 | Chy-Chr2:9193429 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy11g01095 | K22048 | - | csv:101210264 | 1742.24 |