Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g01095 ATGGATTTCTCTCTCAAGTCTTTCAAATCTCATCCTTCTTACAAATATGTAAGGAAGCTTTCTGGAGCAGATACTACTCAAGATCATGAGCACCTTCCTATTCTTTCTGATCACCAACACTCCATAATGGCAGTTTCCGATTCATCTGATCGGAAAGAGGTTATCGTCAAGGTCGATGAGGCCGATGCTCCCAGTTTAAGAGCTACGAACTTGGTAAACGGAAGTGGCAGGATTTGGCGGGAGTCCAGCTATGATTTCTGGAATGATAGTGATAATAGACGGAGTTATGGCGAGGGTGGTGCTAAGACCACTGAAGATTTTGAGTTTAGGCATAGGAAGGATGTGGAAGATCCGCCCTCCAAGCTTATCGGGCAGTTTCTTCACAAACAGAAGGCGTCGGGAGAGATATCTTTAGATATGGATATGGAAATGCTGGAACTACCACAGGATAAGACTCCGCTTTCTACGGTGGCGGAATCTCCGATGCGACGGAGTTCGAGAGAGTTGAAGGTTTCCTTTGAGTCTATTTCAGAAATATCTGAAAACGATTCCATGCGAAGACGGCACAGAGACTCACCACTCGATGAAGAACATAGAGGTCAGCTTCCGAGGCAGTGTGATCGTCGTGCGCATGGCAGCAATGGTGAAGATGATGGTGCTGCTGAGGTATTGAGATGCTCATCCAATTCTTCCTTTCAAAGAGATGTATCGTTCCAGAGGAAATCTAGCTTGCTTAGGGCTAAAACTAAGTCTAGATTACTGGATCCACCCGAACACCAAGACCGGAGGTCAGGGCGTGTACCAAAATCAGGGCAAGTTCGCTCTGGTTTAATCTCAAAAGCCTTAGATGAGGAAGACGATGATCCATTCTTGGAAGAAGATCTTCCTGATGAGTATAAGAAGGCCAATCTAGGTGTTCTGACTCTGTTACAATGGGCGAGTTTGATTCTGATAATAGCAGCATTGGTTTGCACTTTAACAATTCGTTACTGGAGGAGAAAGAAACTATGGAAGCTTGAAGTATGGAAATGGGAGGTTATGATTCTTGTTCTAATATGTGGAAGACTTGTTTCTGGTTGGGGGATTAGGGTAATCGTCTTCTTTATTGAAAGAAACTTTCTACTTCGTAAGAGGGTTCTATACTTTGTTTATGGAGTCAGAAAGGCGGTCCAGAATTGTCTTTGGTTAGGTCTAGTTTTAATTGCTTGGAACTTCCTGTTTGATGACAAAGTTCAAAGAGAGGTAAAGAGCAATGCCTTAGAATATGTGACCAAAGTATTGGTATGTCTTCTTGTAAGCACTTTGGTTTGGCTAGTAAAAACACTGATGGTGAAGGTTTTGGCCTCTTCTTTCCATGTGAGTACATATTTTGATAGGATTCAAGATGCATTGTTTAACCAATATGTAATTGAGACACTGTCAGGTCCTCCATTGATAGAGATTCAAAAGAATGAGGAAGAAGAAGAGAGGCTTGCTGAAGAGGTTATAAAGTTACAGAATGCAGGGGCTACCATCCCTCCTGATTTAAAGGCAACTGCCTTTTCTACAGCTCAAAAGGGTGGGAGGGTGATAGGTAGTGGAGGGTTGCAAAAAAGTCCTCGTGGAAGAAGTGGCAAGTTATCTAGGACACTGTCGAAAAAGGGAGGCGATGAGGGTATAACAATTGATCACTTGCATAAGCTTAGTCCTAAGAATGTGTCTGCTTGGAATATGAAGAGATTGATGAACATTGTTAGACATGGGACCCTTTCAACTTTGGATGAACAGATTAAAGATACAGCTCATGAGGACGAATCAACCACACAGATCAAGAGTGAATATGAAGCAAAAGTTGCTGCGAAGAAGATTTTTCTGAACGTGGCTAGAAATGGTTCTAAATATATCTACCTAGAGGACTTGATGCGTTTCATGGAAAAAGACGAGGCTTCAAAAACCATGGGTCTCTTTGAAGGAGCATGTGAGAGTAGAAAAATAAGCAAATCATCCTTGAAAAACTGGGTGGTTAATGCCTTTAGAGAACGAAGGGCTTTAGCTTTGACATTGAACGATACCAAAACAGCAGTGAACAAACTTCACCGCATGGTGAATATTTTAGTTTCTGTCATTATTCTGGTTATTTGGCTATTGATTCTGGGTATTGCCACTAGCAAGTTTCTCCTATTCGTGACCTCTCAACTCGTCCTTGTTGCATTTGTATTTGGAAATACTTGCAAGACTGTTTTTGAATCAATCATCTTCTTATTCGTGATGCATCCATTTGACGTCGGAGACCGATGTGAAATTGATGGTGTGCAGATGATTGTTGAAGAAATGAACATTTTGACTACTATTTTTCTAAGATACGACAACCAGAAGATCATATTTCCGAACAGCGTTCTTGCAACAAAGGCTATCCACAACTTCTATCGTAGTCCTGACATGGGAGATGGTGTAGAATTCTGTCTTCACATATCTACTCCACCTGAGAAAATAGCTATCATGAGACAAAGAATAATAAGTTACATTGAGAGCAAGAAAGAGCATTGGTGTCCTGCGCCGATGATTGTCCTAAAGGATGTAGAAGAGTTAAATAGAATGAGAATAGCAATATGGCTTACTCATAGAATGAACCATCAAGACATGGGGGAGAGGTGGACAAGGAGAGCTCTTTTGGTCGAAGAACTCATTAAAATTTTCCAAGAGCTCGATTTGCAATACCGTCTCCTACCACTCGATATCAATGTTCGCTCCTTGCCTCCCGTGAACTCTACTAATCTTCCTCCAAGGTAA 2769 41.71 MDFSLKSFKSHPSYKYVRKLSGADTTQDHEHLPILSDHQHSIMAVSDSSDRKEVIVKVDEADAPSLRATNLVNGSGRIWRESSYDFWNDSDNRRSYGEGGAKTTEDFEFRHRKDVEDPPSKLIGQFLHKQKASGEISLDMDMEMLELPQDKTPLSTVAESPMRRSSRELKVSFESISEISENDSMRRRHRDSPLDEEHRGQLPRQCDRRAHGSNGEDDGAAEVLRCSSNSSFQRDVSFQRKSSLLRAKTKSRLLDPPEHQDRRSGRVPKSGQVRSGLISKALDEEDDDPFLEEDLPDEYKKANLGVLTLLQWASLILIIAALVCTLTIRYWRRKKLWKLEVWKWEVMILVLICGRLVSGWGIRVIVFFIERNFLLRKRVLYFVYGVRKAVQNCLWLGLVLIAWNFLFDDKVQREVKSNALEYVTKVLVCLLVSTLVWLVKTLMVKVLASSFHVSTYFDRIQDALFNQYVIETLSGPPLIEIQKNEEEEERLAEEVIKLQNAGATIPPDLKATAFSTAQKGGRVIGSGGLQKSPRGRSGKLSRTLSKKGGDEGITIDHLHKLSPKNVSAWNMKRLMNIVRHGTLSTLDEQIKDTAHEDESTTQIKSEYEAKVAAKKIFLNVARNGSKYIYLEDLMRFMEKDEASKTMGLFEGACESRKISKSSLKNWVVNAFRERRALALTLNDTKTAVNKLHRMVNILVSVIILVIWLLILGIATSKFLLFVTSQLVLVAFVFGNTCKTVFESIIFLFVMHPFDVGDRCEIDGVQMIVEEMNILTTIFLRYDNQKIIFPNSVLATKAIHNFYRSPDMGDGVEFCLHISTPPEKIAIMRQRIISYIESKKEHWCPAPMIVLKDVEELNRMRIAIWLTHRMNHQDMGERWTRRALLVEELIKIFQELDLQYRLLPLDINVRSLPPVNSTNLPPR* 923
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 15977556 15981439 + Chy11G196750.1 Chy11g01095 236856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g01095 922 MobiDBLite consensus disorder prediction 523 548 - -
Chy11g01095 922 MobiDBLite consensus disorder prediction 180 218 - -
Chy11g01095 922 MobiDBLite consensus disorder prediction 251 268 - -
Chy11g01095 922 MobiDBLite consensus disorder prediction 149 220 - -
Chy11g01095 922 Coils Coil 481 504 - -
Chy11g01095 922 PIRSF Memb_At2g17000 37 922 IPR016688 -
Chy11g01095 922 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 6 919 IPR016688 -
Chy11g01095 922 MobiDBLite consensus disorder prediction 249 273 - -
Chy11g01095 922 Gene3D - 752 801 IPR023408 -
Chy11g01095 922 Pfam Mechanosensitive ion channel 694 896 IPR006685 GO:0016020|GO:0055085
Chy11g01095 922 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 6 919 - -
Chy11g01095 922 SUPERFAMILY Sm-like ribonucleoproteins 742 801 IPR010920 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00654 Chy-Chr1:4659404 Chy11g01095 Chy-Chr11:15977556 0 dispersed
Chy05g00620 Chy-Chr5:7539200 Chy11g01095 Chy-Chr11:15977556 1.53E-170 dispersed
Chy07g00275 Chy-Chr7:2150206 Chy11g01095 Chy-Chr11:15977556 5.46E-153 dispersed
Chy07g00276 Chy-Chr7:2155922 Chy11g01095 Chy-Chr11:15977556 1.99E-148 dispersed
Chy11g01095 Chy-Chr11:15977556 Chy02g01258 Chy-Chr2:9193429 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g01095 K22048 - csv:101210264 1742.24