Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy11g01134 | ATGGGCTGCATCTGTTCTAAGGTTTTAGCTGACGAGTATAGTGACAATGAGCATGATAGCTCCAAAAGACCCCATTCCTCTATTAAACACCTCTCTGAATTGAAAATACCAAGAGCTGGTTCTCCCAATTCTTCTCAGATTTGGGAGAAGGATAGACTGGATTGTAGTGATGTTACGGTTATGTTGTTCGATACGAAGCCAAACGGTTCTCTACGTTCATACAACAAGCCTCCTAATGAGAAGAAGAAGACAGATATCCTTGATGTCACCTTTATCAACCATCCACGTATCAGAAAGATTCCAAATGCTATCGAAGCCGAGCAAGTCGCTGCCGGGTGGCCGAGTTGGCTGGCTGTGGTGGCTGGTGAAGCTATCAAAGACTGGTTGCCAAAACGTGCAAGCAACTTCGTCAAGTTAGAGAAAATTGGCCAAGGAACTTATAGCAGTGTGTATAAAGCTCGTGATATCATTCAAGATAAAGTTGTGGCTTTGAAAAGGATCAGATTTGACAATCAAGATGCTGAGAGTATCAAGTTTATGGCAAGGGAAATCCTTGTTTTGAGAAGGCTTGATCATCCAAATATAGTTAAGTTGGAAGGTTTGATCACATCACAAACATCTTGTACCATGTACCTTGTTTTTGAATATATGGAACATGATCTTACCGGACTCACATCACGGCCTGGTGCATCGTTCACCGAACCACAGATGAAGTGTTACATGAAGCAACTTTTGAGTGGACTTGATCATTGTCACAGTAACGGGGTTCTACATAGAGACATAAAGGGCTCTAATCTTCTTATTGACAATAATGGTATTTTAAAGATAGCAGATTTTGGGTTAGCTGTTTTCTTTGATTCGCAATCAACAGTTCCGATGACAAGCCGTGTAATAACTCTCTGGTATCGACCACCAGAACTTTTACTTGGAGCGTCTAAATATGGAGTCGAAGTTGATTTATGGAGCGCTGGTTGCATTCTAGGAGAGTTATATAGTGGCAAACCTATCTTGCCAGGAAAAACAGAGGTTGAACAACTACATAAAATATATAAGCTATGTGGTTCTCCTTCCAAGGACTATTGGAAAAAATTGCATTTGAAGCCTTCAACAAGCATGAAACCTCCACAGTCATACGAAAGATGTCTTCGAGAAAGATATAACGATATTCCTCATAGCACTGTCGATCTTATGGACACTTTGTTATCTATAGATCCTGCAGGGCGAGGAACTGCAGCTTCCGCTCTCGACAGTGAGTTCTTTACCACAAGGCCCTTACCAAGTGATCCTTCAAGTTTGTCAAAATACCCTCCAAGCAAAGAGATCAATACAAAACTGCGTGAAGAAGAAGCAAGAAGGCAAAAAGGAGTAGGCGGTGGTAGAAGCCAAATAGTCTACCAAGAAGCAAAAGGAATGAAGCAATCTAGAGTAGTTCCTGCTGCAAAGACTAATGCTGATCAATTGGTTATTTCATTATTGAGAAAACAAAGTCGTTGGACTGCGAAATACCGGAATGAAACGTGTTCTTACGGTTTGATGTCCAAGAGAAACTCAAACTCAGGACCTATAACGACTCAGGGACCAAGATATACAAACTCAAAAAAGGAACCGAAAAATGCTTCGATTTCGAGTGAGTGTTTAACATCATCTGGTTCAATGGAATTTGTTTCTTATAAATACGTCAGCGAAAGATCAAAAGGAGTTTCAAGGCCAGAATCAATGAGCGAAGACAAAAATCTTCCTCCTCTATCCAGTTCTGGTGAAGTGTCATCCATCAATAAGATGAACAAAGAAGACCAGGTTGATATGAAGAAAGTTGCAAATTCTTGTCACTTGGAAGAATCAAAGGCCTCAGCTCTAATAGTTGGCTAA | 1869 | 40.72 | MGCICSKVLADEYSDNEHDSSKRPHSSIKHLSELKIPRAGSPNSSQIWEKDRLDCSDVTVMLFDTKPNGSLRSYNKPPNEKKKTDILDVTFINHPRIRKIPNAIEAEQVAAGWPSWLAVVAGEAIKDWLPKRASNFVKLEKIGQGTYSSVYKARDIIQDKVVALKRIRFDNQDAESIKFMAREILVLRRLDHPNIVKLEGLITSQTSCTMYLVFEYMEHDLTGLTSRPGASFTEPQMKCYMKQLLSGLDHCHSNGVLHRDIKGSNLLIDNNGILKIADFGLAVFFDSQSTVPMTSRVITLWYRPPELLLGASKYGVEVDLWSAGCILGELYSGKPILPGKTEVEQLHKIYKLCGSPSKDYWKKLHLKPSTSMKPPQSYERCLRERYNDIPHSTVDLMDTLLSIDPAGRGTAASALDSEFFTTRPLPSDPSSLSKYPPSKEINTKLREEEARRQKGVGGGRSQIVYQEAKGMKQSRVVPAAKTNADQLVISLLRKQSRWTAKYRNETCSYGLMSKRNSNSGPITTQGPRYTNSKKEPKNASISSECLTSSGSMEFVSYKYVSERSKGVSRPESMSEDKNLPPLSSSGEVSSINKMNKEDQVDMKKVANSCHLEESKASALIVG* | 623 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 17034333 | 17036836 | - | Chy11G197140.1 | Chy11g01134 | 236895 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy11g01134 | 622 | Gene3D | Transferase(Phosphotransferase) domain 1 | 219 | 458 | - | - | |
Chy11g01134 | 622 | CDD | STKc_CDK9_like | 136 | 420 | - | - | |
Chy11g01134 | 622 | PANTHER | CELL DIVISION PROTEIN KINASE | 73 | 608 | - | - | |
Chy11g01134 | 622 | PANTHER | BINDING PROTEIN, PUTATIVE-RELATED | 73 | 608 | - | - | |
Chy11g01134 | 622 | Pfam | Protein kinase domain | 136 | 420 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy11g01134 | 622 | ProSitePatterns | Protein kinases ATP-binding region signature. | 142 | 165 | IPR017441 | GO:0005524 | |
Chy11g01134 | 622 | MobiDBLite | consensus disorder prediction | 510 | 544 | - | - | |
Chy11g01134 | 622 | MobiDBLite | consensus disorder prediction | 577 | 593 | - | - | |
Chy11g01134 | 622 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 256 | 268 | IPR008271 | GO:0004672|GO:0006468 | |
Chy11g01134 | 622 | Gene3D | Phosphorylase Kinase; domain 1 | 122 | 218 | - | - | |
Chy11g01134 | 622 | SUPERFAMILY | Protein kinase-like (PK-like) | 131 | 427 | IPR011009 | - | |
Chy11g01134 | 622 | SMART | serkin_6 | 136 | 420 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy11g01134 | 622 | MobiDBLite | consensus disorder prediction | 565 | 597 | - | - | |
Chy11g01134 | 622 | MobiDBLite | consensus disorder prediction | 420 | 460 | - | - | |
Chy11g01134 | 622 | MobiDBLite | consensus disorder prediction | 423 | 438 | - | - | |
Chy11g01134 | 622 | ProSiteProfiles | Protein kinase domain profile. | 136 | 420 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy11g01134 | 622 | MobiDBLite | consensus disorder prediction | 440 | 455 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Chy01g00340 | Chy11g01134 | CCT | |
Chy01g00340 | Chy11g01134 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy10g00271 | Chy-Chr10:6694529 | Chy11g01134 | Chy-Chr11:17034333 | 0 | dispersed | |
Chy11g01134 | Chy-Chr11:17034333 | Chy12g01147 | Chy-Chr12:16403329 | 0 | dispersed | |
Chy11g01132 | Chy-Chr11:17026145 | Chy11g01134 | Chy-Chr11:17034333 | 9.26E-39 | proximal | |
Chy11g01133 | Chy-Chr11:17027780 | Chy11g01134 | Chy-Chr11:17034333 | 8.52E-153 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
71561 | PF00069 | Pkinase | 1.30E-67 | CL0016 | Chy | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy11g01134 | - | - | csv:101207580 | 1212.21 |