Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g01134 ATGGGCTGCATCTGTTCTAAGGTTTTAGCTGACGAGTATAGTGACAATGAGCATGATAGCTCCAAAAGACCCCATTCCTCTATTAAACACCTCTCTGAATTGAAAATACCAAGAGCTGGTTCTCCCAATTCTTCTCAGATTTGGGAGAAGGATAGACTGGATTGTAGTGATGTTACGGTTATGTTGTTCGATACGAAGCCAAACGGTTCTCTACGTTCATACAACAAGCCTCCTAATGAGAAGAAGAAGACAGATATCCTTGATGTCACCTTTATCAACCATCCACGTATCAGAAAGATTCCAAATGCTATCGAAGCCGAGCAAGTCGCTGCCGGGTGGCCGAGTTGGCTGGCTGTGGTGGCTGGTGAAGCTATCAAAGACTGGTTGCCAAAACGTGCAAGCAACTTCGTCAAGTTAGAGAAAATTGGCCAAGGAACTTATAGCAGTGTGTATAAAGCTCGTGATATCATTCAAGATAAAGTTGTGGCTTTGAAAAGGATCAGATTTGACAATCAAGATGCTGAGAGTATCAAGTTTATGGCAAGGGAAATCCTTGTTTTGAGAAGGCTTGATCATCCAAATATAGTTAAGTTGGAAGGTTTGATCACATCACAAACATCTTGTACCATGTACCTTGTTTTTGAATATATGGAACATGATCTTACCGGACTCACATCACGGCCTGGTGCATCGTTCACCGAACCACAGATGAAGTGTTACATGAAGCAACTTTTGAGTGGACTTGATCATTGTCACAGTAACGGGGTTCTACATAGAGACATAAAGGGCTCTAATCTTCTTATTGACAATAATGGTATTTTAAAGATAGCAGATTTTGGGTTAGCTGTTTTCTTTGATTCGCAATCAACAGTTCCGATGACAAGCCGTGTAATAACTCTCTGGTATCGACCACCAGAACTTTTACTTGGAGCGTCTAAATATGGAGTCGAAGTTGATTTATGGAGCGCTGGTTGCATTCTAGGAGAGTTATATAGTGGCAAACCTATCTTGCCAGGAAAAACAGAGGTTGAACAACTACATAAAATATATAAGCTATGTGGTTCTCCTTCCAAGGACTATTGGAAAAAATTGCATTTGAAGCCTTCAACAAGCATGAAACCTCCACAGTCATACGAAAGATGTCTTCGAGAAAGATATAACGATATTCCTCATAGCACTGTCGATCTTATGGACACTTTGTTATCTATAGATCCTGCAGGGCGAGGAACTGCAGCTTCCGCTCTCGACAGTGAGTTCTTTACCACAAGGCCCTTACCAAGTGATCCTTCAAGTTTGTCAAAATACCCTCCAAGCAAAGAGATCAATACAAAACTGCGTGAAGAAGAAGCAAGAAGGCAAAAAGGAGTAGGCGGTGGTAGAAGCCAAATAGTCTACCAAGAAGCAAAAGGAATGAAGCAATCTAGAGTAGTTCCTGCTGCAAAGACTAATGCTGATCAATTGGTTATTTCATTATTGAGAAAACAAAGTCGTTGGACTGCGAAATACCGGAATGAAACGTGTTCTTACGGTTTGATGTCCAAGAGAAACTCAAACTCAGGACCTATAACGACTCAGGGACCAAGATATACAAACTCAAAAAAGGAACCGAAAAATGCTTCGATTTCGAGTGAGTGTTTAACATCATCTGGTTCAATGGAATTTGTTTCTTATAAATACGTCAGCGAAAGATCAAAAGGAGTTTCAAGGCCAGAATCAATGAGCGAAGACAAAAATCTTCCTCCTCTATCCAGTTCTGGTGAAGTGTCATCCATCAATAAGATGAACAAAGAAGACCAGGTTGATATGAAGAAAGTTGCAAATTCTTGTCACTTGGAAGAATCAAAGGCCTCAGCTCTAATAGTTGGCTAA 1869 40.72 MGCICSKVLADEYSDNEHDSSKRPHSSIKHLSELKIPRAGSPNSSQIWEKDRLDCSDVTVMLFDTKPNGSLRSYNKPPNEKKKTDILDVTFINHPRIRKIPNAIEAEQVAAGWPSWLAVVAGEAIKDWLPKRASNFVKLEKIGQGTYSSVYKARDIIQDKVVALKRIRFDNQDAESIKFMAREILVLRRLDHPNIVKLEGLITSQTSCTMYLVFEYMEHDLTGLTSRPGASFTEPQMKCYMKQLLSGLDHCHSNGVLHRDIKGSNLLIDNNGILKIADFGLAVFFDSQSTVPMTSRVITLWYRPPELLLGASKYGVEVDLWSAGCILGELYSGKPILPGKTEVEQLHKIYKLCGSPSKDYWKKLHLKPSTSMKPPQSYERCLRERYNDIPHSTVDLMDTLLSIDPAGRGTAASALDSEFFTTRPLPSDPSSLSKYPPSKEINTKLREEEARRQKGVGGGRSQIVYQEAKGMKQSRVVPAAKTNADQLVISLLRKQSRWTAKYRNETCSYGLMSKRNSNSGPITTQGPRYTNSKKEPKNASISSECLTSSGSMEFVSYKYVSERSKGVSRPESMSEDKNLPPLSSSGEVSSINKMNKEDQVDMKKVANSCHLEESKASALIVG* 623
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 17034333 17036836 - Chy11G197140.1 Chy11g01134 236895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g01134 622 Gene3D Transferase(Phosphotransferase) domain 1 219 458 - -
Chy11g01134 622 CDD STKc_CDK9_like 136 420 - -
Chy11g01134 622 PANTHER CELL DIVISION PROTEIN KINASE 73 608 - -
Chy11g01134 622 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 73 608 - -
Chy11g01134 622 Pfam Protein kinase domain 136 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy11g01134 622 ProSitePatterns Protein kinases ATP-binding region signature. 142 165 IPR017441 GO:0005524
Chy11g01134 622 MobiDBLite consensus disorder prediction 510 544 - -
Chy11g01134 622 MobiDBLite consensus disorder prediction 577 593 - -
Chy11g01134 622 ProSitePatterns Serine/Threonine protein kinases active-site signature. 256 268 IPR008271 GO:0004672|GO:0006468
Chy11g01134 622 Gene3D Phosphorylase Kinase; domain 1 122 218 - -
Chy11g01134 622 SUPERFAMILY Protein kinase-like (PK-like) 131 427 IPR011009 -
Chy11g01134 622 SMART serkin_6 136 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy11g01134 622 MobiDBLite consensus disorder prediction 565 597 - -
Chy11g01134 622 MobiDBLite consensus disorder prediction 420 460 - -
Chy11g01134 622 MobiDBLite consensus disorder prediction 423 438 - -
Chy11g01134 622 ProSiteProfiles Protein kinase domain profile. 136 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy11g01134 622 MobiDBLite consensus disorder prediction 440 455 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy01g00340 Chy11g01134 CCT
Chy01g00340 Chy11g01134 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy10g00271 Chy-Chr10:6694529 Chy11g01134 Chy-Chr11:17034333 0 dispersed
Chy11g01134 Chy-Chr11:17034333 Chy12g01147 Chy-Chr12:16403329 0 dispersed
Chy11g01132 Chy-Chr11:17026145 Chy11g01134 Chy-Chr11:17034333 9.26E-39 proximal
Chy11g01133 Chy-Chr11:17027780 Chy11g01134 Chy-Chr11:17034333 8.52E-153 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71561 PF00069 Pkinase 1.30E-67 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g01134 - - csv:101207580 1212.21