Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g01164 ATGCTAGATCCACCACCGCCATCAAACCCTATCCCCACTCCCAATTCCAATCAAATTCCTCCACTCAATGTTACACAACCGCCCCCCAAGACTCACAAACCCCCGCCGCCGCCGGTGGTCTCCAATGCCACGGCGGCGCCTTCTTCATCATCGTTTTTTCCCAATGTCAATGCTGGAAATGCCTCATTCATTCCTAGACTTGGTTCTCATCATCGGAGAGCTCATTCCGAAGTTAGTTTCCGGTTGCCGGAGGATATGATGGATATTTCCGGGTCGGATCCGTTTAATGGTGGTTCGTCCACGGCGAGTTTGGAGGAGATCGGATCGGAAGATGATCTGTTTTCGACCTACATTGATGTGAAGAAGCTTGGAGGTAATGGCGGAGGGAATTTTGTGGATCATAATGGTAATGGTGGATGTGAAGGTGGTGGTGGTGGTAGTGAAGGGGAGAAGACTTCGAAACCAAGGCATCGGCATAGTGTTTCGGTGGATGGAACGACGTCGTCGTCGAGTATGTTTGGGGAAATTATGGAAGCCAAGAAAGCTATGCCTCCTGATAAGTTGGCTGAGCTTTGGTCCAGTGATCCCAAACGCGCTAAAAGGATACTGGCAAATCGACAGTCAGCTGCACGCTCGAAAGAGAGAAAGGCACGATATATACAAGAGTTGGAACGCAAAGTGCAAACTCTTCAAACAGAAGCAACTACTCTATCAGCTCAATTGACTTTGTTCCAGCGAGACACAACGGGACTCAGTACTGAAAATACAGAGCTTAAGCTTCGGTTACAGGCTATGGAGCAACAAGCCCAATTACGTGATGCTTTGAACGATGCATTAAAGAAGGAAGTCGAGAGGCTTAAAATCGCTACCGGGGAAATGATGAGCCCGTCCGAGTCGTTTAACTTGGGAATGCATCATATGGCATACGCCCCGTCGTCTTTCATTCAACTTTCACAGCAACAACGAGGATCTACTGGCCTTCAAAATATGCAAATCCCACCATTTGGTCATTCTCCATCCAATATGTCTACCCACCCGTTGCTTCCATCAGATTCTCATTCTCTCTCTGAGGTTCTACAGACTGACTCTCTAGGTCGATTACAGGGTCTCGACATCAGTAGTCAAGGATCGTCGCTTGTGAAATCCGAGGGCCCTTCACTCTCTGCTAGTGAAAGCAGTACAACCTTTTGA 1191 48.19 MLDPPPPSNPIPTPNSNQIPPLNVTQPPPKTHKPPPPPVVSNATAAPSSSSFFPNVNAGNASFIPRLGSHHRRAHSEVSFRLPEDMMDISGSDPFNGGSSTASLEEIGSEDDLFSTYIDVKKLGGNGGGNFVDHNGNGGCEGGGGGSEGEKTSKPRHRHSVSVDGTTSSSSMFGEIMEAKKAMPPDKLAELWSSDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLFQRDTTGLSTENTELKLRLQAMEQQAQLRDALNDALKKEVERLKIATGEMMSPSESFNLGMHHMAYAPSSFIQLSQQQRGSTGLQNMQIPPFGHSPSNMSTHPLLPSDSHSLSEVLQTDSLGRLQGLDISSQGSSLVKSEGPSLSASESSTTF* 397
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 17745019 17748194 - Chy11G197440.1 Chy11g01164 236925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g01164 396 MobiDBLite consensus disorder prediction 373 396 - -
Chy11g01164 396 MobiDBLite consensus disorder prediction 1 79 - -
Chy11g01164 396 Coils Coil 213 240 - -
Chy11g01164 396 MobiDBLite consensus disorder prediction 1 42 - -
Chy11g01164 396 Pfam bZIP transcription factor 197 245 IPR004827 GO:0003700|GO:0006355
Chy11g01164 396 MobiDBLite consensus disorder prediction 134 169 - -
Chy11g01164 396 Gene3D - 197 246 - -
Chy11g01164 396 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 195 258 IPR004827 GO:0003700|GO:0006355
Chy11g01164 396 PANTHER ATBZIP TRANSCRIPTION FACTOR 5 393 - -
Chy11g01164 396 SUPERFAMILY Leucine zipper domain 197 248 IPR046347 GO:0003700|GO:0006355
Chy11g01164 396 SMART brlzneu 193 257 IPR004827 GO:0003700|GO:0006355
Chy11g01164 396 MobiDBLite consensus disorder prediction 43 58 - -
Chy11g01164 396 MobiDBLite consensus disorder prediction 318 355 - -
Chy11g01164 396 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 5 393 - -
Chy11g01164 396 CDD bZIP_plant_RF2 198 247 IPR044759 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy10g00314 Chy-Chr10:7869775 Chy11g01164 Chy-Chr11:17745019 1.44E-109 dispersed
Chy11g01164 Chy-Chr11:17745019 Chy11g00653 Chy-Chr11:7905677 1.15E-20 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18742 PF00170 bZIP_1 1.60E-08 CL0018 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g01164 - - csv:101205663 644.425