Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy11g01164 | ATGCTAGATCCACCACCGCCATCAAACCCTATCCCCACTCCCAATTCCAATCAAATTCCTCCACTCAATGTTACACAACCGCCCCCCAAGACTCACAAACCCCCGCCGCCGCCGGTGGTCTCCAATGCCACGGCGGCGCCTTCTTCATCATCGTTTTTTCCCAATGTCAATGCTGGAAATGCCTCATTCATTCCTAGACTTGGTTCTCATCATCGGAGAGCTCATTCCGAAGTTAGTTTCCGGTTGCCGGAGGATATGATGGATATTTCCGGGTCGGATCCGTTTAATGGTGGTTCGTCCACGGCGAGTTTGGAGGAGATCGGATCGGAAGATGATCTGTTTTCGACCTACATTGATGTGAAGAAGCTTGGAGGTAATGGCGGAGGGAATTTTGTGGATCATAATGGTAATGGTGGATGTGAAGGTGGTGGTGGTGGTAGTGAAGGGGAGAAGACTTCGAAACCAAGGCATCGGCATAGTGTTTCGGTGGATGGAACGACGTCGTCGTCGAGTATGTTTGGGGAAATTATGGAAGCCAAGAAAGCTATGCCTCCTGATAAGTTGGCTGAGCTTTGGTCCAGTGATCCCAAACGCGCTAAAAGGATACTGGCAAATCGACAGTCAGCTGCACGCTCGAAAGAGAGAAAGGCACGATATATACAAGAGTTGGAACGCAAAGTGCAAACTCTTCAAACAGAAGCAACTACTCTATCAGCTCAATTGACTTTGTTCCAGCGAGACACAACGGGACTCAGTACTGAAAATACAGAGCTTAAGCTTCGGTTACAGGCTATGGAGCAACAAGCCCAATTACGTGATGCTTTGAACGATGCATTAAAGAAGGAAGTCGAGAGGCTTAAAATCGCTACCGGGGAAATGATGAGCCCGTCCGAGTCGTTTAACTTGGGAATGCATCATATGGCATACGCCCCGTCGTCTTTCATTCAACTTTCACAGCAACAACGAGGATCTACTGGCCTTCAAAATATGCAAATCCCACCATTTGGTCATTCTCCATCCAATATGTCTACCCACCCGTTGCTTCCATCAGATTCTCATTCTCTCTCTGAGGTTCTACAGACTGACTCTCTAGGTCGATTACAGGGTCTCGACATCAGTAGTCAAGGATCGTCGCTTGTGAAATCCGAGGGCCCTTCACTCTCTGCTAGTGAAAGCAGTACAACCTTTTGA | 1191 | 48.19 | MLDPPPPSNPIPTPNSNQIPPLNVTQPPPKTHKPPPPPVVSNATAAPSSSSFFPNVNAGNASFIPRLGSHHRRAHSEVSFRLPEDMMDISGSDPFNGGSSTASLEEIGSEDDLFSTYIDVKKLGGNGGGNFVDHNGNGGCEGGGGGSEGEKTSKPRHRHSVSVDGTTSSSSMFGEIMEAKKAMPPDKLAELWSSDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLFQRDTTGLSTENTELKLRLQAMEQQAQLRDALNDALKKEVERLKIATGEMMSPSESFNLGMHHMAYAPSSFIQLSQQQRGSTGLQNMQIPPFGHSPSNMSTHPLLPSDSHSLSEVLQTDSLGRLQGLDISSQGSSLVKSEGPSLSASESSTTF* | 397 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 17745019 | 17748194 | - | Chy11G197440.1 | Chy11g01164 | 236925 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy11g01164 | 396 | MobiDBLite | consensus disorder prediction | 373 | 396 | - | - | |
Chy11g01164 | 396 | MobiDBLite | consensus disorder prediction | 1 | 79 | - | - | |
Chy11g01164 | 396 | Coils | Coil | 213 | 240 | - | - | |
Chy11g01164 | 396 | MobiDBLite | consensus disorder prediction | 1 | 42 | - | - | |
Chy11g01164 | 396 | Pfam | bZIP transcription factor | 197 | 245 | IPR004827 | GO:0003700|GO:0006355 | |
Chy11g01164 | 396 | MobiDBLite | consensus disorder prediction | 134 | 169 | - | - | |
Chy11g01164 | 396 | Gene3D | - | 197 | 246 | - | - | |
Chy11g01164 | 396 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 195 | 258 | IPR004827 | GO:0003700|GO:0006355 | |
Chy11g01164 | 396 | PANTHER | ATBZIP TRANSCRIPTION FACTOR | 5 | 393 | - | - | |
Chy11g01164 | 396 | SUPERFAMILY | Leucine zipper domain | 197 | 248 | IPR046347 | GO:0003700|GO:0006355 | |
Chy11g01164 | 396 | SMART | brlzneu | 193 | 257 | IPR004827 | GO:0003700|GO:0006355 | |
Chy11g01164 | 396 | MobiDBLite | consensus disorder prediction | 43 | 58 | - | - | |
Chy11g01164 | 396 | MobiDBLite | consensus disorder prediction | 318 | 355 | - | - | |
Chy11g01164 | 396 | PANTHER | TRANSCRIPTION FACTOR POSF21-RELATED | 5 | 393 | - | - | |
Chy11g01164 | 396 | CDD | bZIP_plant_RF2 | 198 | 247 | IPR044759 | GO:0003700|GO:0006355 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy10g00314 | Chy-Chr10:7869775 | Chy11g01164 | Chy-Chr11:17745019 | 1.44E-109 | dispersed | |
Chy11g01164 | Chy-Chr11:17745019 | Chy11g00653 | Chy-Chr11:7905677 | 1.15E-20 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
18742 | PF00170 | bZIP_1 | 1.60E-08 | CL0018 | Chy | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy11g01164 | - | - | csv:101205663 | 644.425 |