Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g01169 ATGGATCTCCTCCTCTTGGAGAAGACTCTCCTCGGCCTCTTCCTCGCCGTCGTTCTCGCCATCGCCATTTCCAAGCTTCGCGGCAAGCGTTTCAAGCTTCCGCCGGGTCCTTTACCCGTCCCCATCTTCGGCAACTGGCTCCAAGTCGGCGATGACTTGAACCACCGTAACCTCACAGATCTCGCCAAGAAATTTGGCGATATCTTCTTACTTCGGATGGGACAGAGGAACCTCGTCGTCGTTTCCTCCCCGGAATTAGCCAAGGAAGTGCTCCACACTCAGGGAGTTGAGTTCGGATCGCGAACCAGAAACGTCGTCTTCGATATTTTCACCGGTAAAGGTCAGGATATGGTTTTCACTGTCTATGGTGAACACTGGAGGAAAATGAGGCGGATTATGACTGTTCCGTTTTTCACTAACAAAGTAGTACAGCAATACCGTCAAGGATGGGAGTTCGAAGCTCAAAGTGTAGTGGATGATGTGAAGAAGAATACAGAATCTGCGACTACTGGAATCGTTCTCCGACGGCGGTTGCAGCTTATGATGTACAATAACATGTACAGAATTATGTTCGATAGAAGATTCGAGAGTGAAGACGATCCTCTGTTTCACAAACTTAGGGCTCTGAATGGAGAGAGAAGCCGATTAGCGCAGAGCTTCGAATACAACTACGGCGATTTCATTCCGATCTTGAGACCGTTCTTGAGAGGATATCTCAAAATCTGCAAGGAAGTTAAGGAAACGAGGCTGAAACTCTTCAAGGATTATTTCGTCGAGGAGAGGAAGAAACTTGCGAACACGAAGAGCACGACGAACGAGGGGTTGAAATGTGCGATTGATCATATATTGGATGCGCAACAGAAGGGAGAAATCAACGAAGATAATGTGCTTTACATTGTTGAGAATATTAATGTGGCAGCAATTGAAACAACATTATGGTCGATTGAATGGGGAATCGCGGAGCTAGTGAACCACCCAGAAATCCAAAGAAAGCTAAGAAATGAAATCGACACCGTACTCGGACCCGGTGTTCCAATCACTGAACCAGACACACAAAAGCTTCCATACCTCCAAGCCGTGATCAAGGAGACACTCCGCCTTCGTATGGCCATCCCATTACTCGTCCCTCACATGAACCTCCACGACGCCAAGCTCGCGGGCTATGACATTCCAGCGGAGAGCAAGATCCTAGTGAATGCTTGGTGGCTAGCCAACAACCCAGCCAACTGGAAGAACCCAGAAGAGTTCCGGCCCGAGAGGTTCTTGGAAGAGGAATCAAAGGTTGATGCCAATGGAAATGATTTTAGATACTTGCCTTTTGGTGTTGGGAGAAGGAGCTGCCCAGGAATCATCTTGGCTTTGCCAATTCTTGGTATTACAATTGGGCGTTTGGTTCAAAACTTTGAGCTGCTTCCTCCTCCTGGACAGTCTAAGTTGGATACTTCAGAGAAAGGTGGGCAATTTAGCTTGCACATTTTGAAACACTCCACCATTGTTGTTAAGCCAAGAGTGTTCTAA 1518 47.43 MDLLLLEKTLLGLFLAVVLAIAISKLRGKRFKLPPGPLPVPIFGNWLQVGDDLNHRNLTDLAKKFGDIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRQGWEFEAQSVVDDVKKNTESATTGIVLRRRLQLMMYNNMYRIMFDRRFESEDDPLFHKLRALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEVKETRLKLFKDYFVEERKKLANTKSTTNEGLKCAIDHILDAQQKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQRKLRNEIDTVLGPGVPITEPDTQKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLAGYDIPAESKILVNAWWLANNPANWKNPEEFRPERFLEEESKVDANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGQSKLDTSEKGGQFSLHILKHSTIVVKPRVF* 506
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 17813436 17816202 - Chy11G197490.1 Chy11g01169 236930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g01169 505 Gene3D Cytochrome P450 23 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g01169 505 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 1 505 - -
Chy11g01169 505 Pfam Cytochrome P450 34 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g01169 505 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g01169 505 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g01169 505 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g01169 505 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g01169 505 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g01169 505 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g01169 505 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g01169 505 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g01169 505 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g01169 505 SUPERFAMILY Cytochrome P450 34 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g01169 505 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g01169 505 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g01169 505 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g01169 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Chy11g01169 505 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 1 505 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g01713 Chy-Chr1:22930220 Chy11g01169 Chy-Chr11:17813436 0 dispersed
Chy01g01714 Chy-Chr1:22931434 Chy11g01169 Chy-Chr11:17813436 1.25E-14 dispersed
Chy05g00844 Chy-Chr5:12074725 Chy11g01169 Chy-Chr11:17813436 0 dispersed
Chy05g00845 Chy-Chr5:12079228 Chy11g01169 Chy-Chr11:17813436 0 dispersed
Chy11g01169 Chy-Chr11:17813436 Chy04g01675 Chy-Chr4:23132994 3.69E-78 dispersed
Chy11g01169 Chy-Chr11:17813436 Chy12g01221 Chy-Chr12:16937742 4.48E-76 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g01169 K00487 - csv:101221846 982.245