Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g01173 ATGAAGTTCTGTTCAGCATCAGTGCTTCCTCTGTTTTTTGTTATAATTAATCTACTTCACCTTGCAATTGCTGACCTGGAATCAGACAAGCAAGCTCTTCTTGACTTTGCATCTTCTGTTCCACATCGTCGGAGCCTCAACTGGAATGATACTACACCAATATGCACATCTTGGGTTGGCGTTACTTGCAGTGTAGATGGAACTCATGTGCTTACCCTTCGATTACCTGGCATTGGACTTGTGGGTTCAATTCCTTCTGACACCCTAGGGAAACTCGATGGCCTCAAGATTCTCAGTCTACGTTCCAACCTCCTTAGTGGAAATATTCCGTCCGATATTACCTCACTTCCTTCTCTCCAATATCTTTATCTTCAACATAATAACCTCTCTGGTGATGTTCCTTCCTCCCTTTCACCAACTCTTGTTGTATTGAATCTGTCATTCAATTTATTAGAAGGAAAGATTCCAAAGACCGTACAAAATTTGACACAACTAACAGGATTGAACCTCCAAAACAACAATCTTTCCGGTTCTATACCAGATATCAATCTTCCTAAGCTTAAGCATCTCAATATAAGTTATAACCATCTTAATGGTTCTATTCCAACTTTTTTTAATACATTTCCAAATTCGTCCTTCATTGGCAATCCTTCATTATGTGGATCGCCTCTAAAAGCTTGCTCCATAGTCCTATCTCCAGCTCCTCATGCTCCACCTTCACCTGCCATTTCTCAAAAGCAGAGCTCCAAAAAGCTGAAGATGGGAGTTATCATTGCTATTGCAGTTGGTGGATTTTTCGTTCTTTTCCTTGTAGTCCTTTTTGTGGTCTTGTGCTGTTTAAAGAAAAAGGAGGGTGCAGATGCTGGTACAAGAAAAGGGAAGGTTTCTGGTGGTGGGAGAAGTGAAAAACCAAAAGAGGAGTTTGGTAGTGGTGTGCAGGAGCCCGAGAAAAACAAGCTAGTGTTTTTTGAAGGTTGTTCATTTAATTTCGATCTTGAAGACCTATTAAGGGCTTCAGCTGAAGTGCTTGGAAAGGGCAGCTATGGAACAGCTTATAAAGCTGTTTTGGAGGAACCTACCACTGTTGTGGTAAAAAGATTGAAGGAAGTGGTGGTGGGTAAGAGGGAATTTGAACAACAAATGGACATAGTGGGAAGGGTTGGGCAGCACCCGAATGTCATGCCACTCCGAGCATATTACTACTCAAAGGATGAAAAGCTCCTTGTTTATGATTATGTCCCAGGAGGCAGCTTGTCGTCACTCTTGCATGGAAACAGAGGAGGGGAAAGAACTCCACTTGACTGGGACTCGAGAGTGAAAATTGCTCTTGCAACAGCAAAGGGAATTGCTCATATTCAAGCAATGGGTGGTCCAAAATTCACACATGGAAATATCAAGGCCTCCAATGTTCTCCTAATTCAAGATGTCAATGCTTGTGTCTCTGACTTTGGCCTTACCCCTCTTATGAATGTCCCAACTTCTCGAACTGCAGGTTATCGTGCGCCTGAAGTAATCGAAGCTCGCAAACACACACACAAGTCAGATGTGTACAGTTTTGGCGTTCTTCTTCTTGAAATGTTAACTGGAAAAGCTCCTCTCCAATCACCTGGTCGTGATGAAATGGTAGATCTTCCTCGGTGGGTTCAATCGGTTGTGAGGGAGGAATGGACAGCTGAGGTTTTCGATGTTGAGCTAATGAGATACCAGAATATTGAAGAAGAGATGGTGCAGATGTTACAAATAGCAATGACCTGCGTAGCGAAGTTGCCCGACATGAGACCGAACATGGACGAAGTAGTTAGAATGATTGAAGAAATCCGGCAATCTGACTCGGAGAACCGGCCATCTTCCGACGAGAACAAATCAAAGGACTCAAATGTGCAGACCCCATGA 1893 43.0 MKFCSASVLPLFFVIINLLHLAIADLESDKQALLDFASSVPHRRSLNWNDTTPICTSWVGVTCSVDGTHVLTLRLPGIGLVGSIPSDTLGKLDGLKILSLRSNLLSGNIPSDITSLPSLQYLYLQHNNLSGDVPSSLSPTLVVLNLSFNLLEGKIPKTVQNLTQLTGLNLQNNNLSGSIPDINLPKLKHLNISYNHLNGSIPTFFNTFPNSSFIGNPSLCGSPLKACSIVLSPAPHAPPSPAISQKQSSKKLKMGVIIAIAVGGFFVLFLVVLFVVLCCLKKKEGADAGTRKGKVSGGGRSEKPKEEFGSGVQEPEKNKLVFFEGCSFNFDLEDLLRASAEVLGKGSYGTAYKAVLEEPTTVVVKRLKEVVVGKREFEQQMDIVGRVGQHPNVMPLRAYYYSKDEKLLVYDYVPGGSLSSLLHGNRGGERTPLDWDSRVKIALATAKGIAHIQAMGGPKFTHGNIKASNVLLIQDVNACVSDFGLTPLMNVPTSRTAGYRAPEVIEARKHTHKSDVYSFGVLLLEMLTGKAPLQSPGRDEMVDLPRWVQSVVREEWTAEVFDVELMRYQNIEEEMVQMLQIAMTCVAKLPDMRPNMDEVVRMIEEIRQSDSENRPSSDENKSKDSNVQTP* 631
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 17853820 17858078 + Chy11G197530.1 Chy11g01173 236934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g01173 630 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Chy11g01173 630 Pfam Leucine rich repeat 82 129 IPR001611 GO:0005515
Chy11g01173 630 Gene3D Ribonuclease Inhibitor 27 139 IPR032675 -
Chy11g01173 630 MobiDBLite consensus disorder prediction 606 621 - -
Chy11g01173 630 ProSiteProfiles Protein kinase domain profile. 337 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy11g01173 630 MobiDBLite consensus disorder prediction 606 630 - -
Chy11g01173 630 CDD STKc_IRAK 343 606 - -
Chy11g01173 630 Pfam Leucine Rich Repeat 186 204 IPR001611 GO:0005515
Chy11g01173 630 MobiDBLite consensus disorder prediction 288 312 - -
Chy11g01173 630 SUPERFAMILY L domain-like 39 224 - -
Chy11g01173 630 PANTHER OS05G0588300 PROTEIN 6 630 - -
Chy11g01173 630 SUPERFAMILY Protein kinase-like (PK-like) 341 604 IPR011009 -
Chy11g01173 630 Gene3D Phosphorylase Kinase; domain 1 305 412 - -
Chy11g01173 630 PANTHER LRR RECEPTOR-LIKE KINASE 6 630 - -
Chy11g01173 630 ProSitePatterns Protein kinases ATP-binding region signature. 343 374 IPR017441 GO:0005524
Chy11g01173 630 Gene3D Transferase(Phosphotransferase) domain 1 413 629 - -
Chy11g01173 630 Pfam Protein tyrosine and serine/threonine kinase 341 602 IPR001245 GO:0004672|GO:0006468
Chy11g01173 630 Gene3D Ribonuclease Inhibitor 140 228 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g01346 Chy-Chr5:17569042 Chy11g01173 Chy-Chr11:17853820 0 dispersed
Chy08g00561 Chy-Chr8:13215235 Chy11g01173 Chy-Chr11:17853820 0 dispersed
Chy09g00323 Chy-Chr9:2784576 Chy11g01173 Chy-Chr11:17853820 1.88E-62 dispersed
Chy09g01416 Chy-Chr9:15799984 Chy11g01173 Chy-Chr11:17853820 6.82E-171 dispersed
Chy10g01166 Chy-Chr10:16515367 Chy11g01173 Chy-Chr11:17853820 1.58E-157 dispersed
Chy11g01173 Chy-Chr11:17853820 Chy12g01586 Chy-Chr12:19388379 4.51E-108 dispersed
Chy11g01173 Chy-Chr11:17853820 Chy06g01272 Chy-Chr6:11694990 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71562 PF07714 PK_Tyr_Ser-Thr 1.50E-35 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g01173 - - csv:101221378 1180.24