Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g01233 ATGGGTAACGGGATTGGGAAGCTCGGCGTTTGCTTCACCGGTATCAACGACGGTAGACGGCGCCCGGATATTTCCGTTCTCTTAACAAATCCACTAGATGAAGGTCTGGGGCACTCCTTTTGCTATGTCCGGCCGGATCCCTTGAGACTTTCGTTATCAAAAGTTCATTCTGAAGAAACCACCACTTTCCGATCAATTTCTGGCGCCTCTGTAAGTGCAAATACATCAACACCTCTTTCTACTGCTCTTGTTGATCTGTATTCCTACAATAGCATTGATCGAGCGGCGGCTTTTGAGAGTTCCACTTCTTTTGCTTCAATCCCTTTACAACCGATCCCTAGAAACATGATTAATTCCGGTCCGATTTCGGGGAATTTCAGTGGAATCCCCTGCTCTGGGCCTTTGGAAAGAGGGTTTTTATCGGGTCCAATTGAACGAGGGTTTATGTCGGGTCCACTGGATCGGGGGATTTTTTCGGGTCCTCTTGATAATAATTCTACATCCAATGAATTTCAGAGGAGTTTTTCTCATGGTGCTGGGTTTAATTCCAGATCTAGATCAAGAAAAAGCCGGTTAATTCGAATTCTGAGAACCGCAATTTCAAAATCGCTTCATCGAGGACAAAATTCCATTGTGGCTCCGATTAAACCGGTTAAAGAACCCGATTGGATCGTCTTACCCGAGAAGCATAACGAGAATCTGACTGTTAGTAGTTTGAATTTCAGTAGCGAAGGTAGTTTGGAAGATGATGATTCAATGGAGAGCCAAAATCTGCAGTGGGCTCAGGGAAAAGCAGGGGAAGATCGTGTTCATGTTGTTGTTTCTGAAGAACATGGGTGGGTTTTCGTTGGGATTTATGATGGATTTAACGGTCCTGATGCTCCCGATTATCTTTTGTCCAATTTATATTCCTCTGTTCATAAAGAACTCAAAGGTTTGTTATGGGATGAAAAGCTCGATTCTGCTGTTGTAGCCGCTCCGGCTACTTCCCCTGTTCAGTCCGAGAATCCATGTTCAGAAACAAGAGATTTGGAGAGGAATCGAGTGAGTGATGCTTGTTCTCAGTGTGTAGAACAAGAGAATCATCCCTGTGTTAGTGGAGATGGAAATTCTGGATTGAATTCTAGGAAAAGGAAAGGTAAGAATTTAAGAGGAAAGTTTAGAGGAGCTGCTGAGAAATGGGAGGATAATCAACGGCGGTGGAAGTGCGAATGGGACCGGGAAAGATTAGAACTCGACCGGAGGTTAAAGGAGCAGTTGAATCGATCAGGATCGAATGGTTCTAGGTTGATTAATCATTCGGATGTTCTCAAAGCTCTGTCCCAAGCATTGAAGAAAACAGAGGAGGCTTATTTGGATATTGCAGACAAGATGCTTGATGAAAATCCTGAACTGGCTTTGATGGGTTCTTGTGTGCTTGTAATGCTTATGAAGGGAGATGATGTTTATGTTATGAATGTTGGTGACAGCCGAGCAGTTTTAGCGCAGAAGGCGGAGCCTGATTATTGGCTTGGGAAGATTCGACAAGACTTGGAGAGGATTAATGAAGAACCAGTTCATGATATTGAAGCATTAGATGGTGATGGAGCATTCACTTCAGCTAACCTTACTGCTTTTCAGCTTTCCATGGATCATAGTACCAGTGTTGATGAGGAAGTTCAGAGAATAAAAAATGAACACCCTGATGATGCTGGTGCCGTGATGAACGATCGTGTCAAAGGGTCGTTGAAGGTTACTCGAGCATTCGGGGCTGGTTTCCTCAAACAGCCTAAATGGAACAATGCATTGTTGGAAATGTTCAGAATCGACTACGTTGGGAGATCGCCATACATCAATTGTTTACCATCTCTCTACCACCATAGATTGGGACCAAAAGACAGGTTTTTGATACTATCATCAGATGGACTTTACCAGTACTTCACAAACAAAGAAGCTGTTTCCGAAGTCGAACTTTTCATCGCATTGCAACCCGAAGGAGACCCGGCTCAACATCTGGTTGAATTACTACTGTTTCGGGCTGCAAAAAGAGCTGGTATGGATTTCCATGAGTTACTCGAAATACCACAGGGTGATCGGAGGAAGTATCACGATGATGTATCAATCATTGTAATTTCATTAGAAGGGAGGATATGGAGATCTTGTGTATAA 2148 43.53 MGNGIGKLGVCFTGINDGRRRPDISVLLTNPLDEGLGHSFCYVRPDPLRLSLSKVHSEETTTFRSISGASVSANTSTPLSTALVDLYSYNSIDRAAAFESSTSFASIPLQPIPRNMINSGPISGNFSGIPCSGPLERGFLSGPIERGFMSGPLDRGIFSGPLDNNSTSNEFQRSFSHGAGFNSRSRSRKSRLIRILRTAISKSLHRGQNSIVAPIKPVKEPDWIVLPEKHNENLTVSSLNFSSEGSLEDDDSMESQNLQWAQGKAGEDRVHVVVSEEHGWVFVGIYDGFNGPDAPDYLLSNLYSSVHKELKGLLWDEKLDSAVVAAPATSPVQSENPCSETRDLERNRVSDACSQCVEQENHPCVSGDGNSGLNSRKRKGKNLRGKFRGAAEKWEDNQRRWKCEWDRERLELDRRLKEQLNRSGSNGSRLINHSDVLKALSQALKKTEEAYLDIADKMLDENPELALMGSCVLVMLMKGDDVYVMNVGDSRAVLAQKAEPDYWLGKIRQDLERINEEPVHDIEALDGDGAFTSANLTAFQLSMDHSTSVDEEVQRIKNEHPDDAGAVMNDRVKGSLKVTRAFGAGFLKQPKWNNALLEMFRIDYVGRSPYINCLPSLYHHRLGPKDRFLILSSDGLYQYFTNKEAVSEVELFIALQPEGDPAQHLVELLLFRAAKRAGMDFHELLEIPQGDRRKYHDDVSIIVISLEGRIWRSCV* 716
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 18459664 18462471 + Chy11G198130.1 Chy11g01233 236994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g01233 715 Coils Coil 437 457 - -
Chy11g01233 715 CDD PP2Cc 432 706 IPR001932 -
Chy11g01233 715 PANTHER PROTEIN PHOSPHATASE 2C 12 715 IPR015655 GO:0004722|GO:0006470
Chy11g01233 715 PANTHER - 12 715 - -
Chy11g01233 715 ProSiteProfiles PPM-type phosphatase domain profile. 250 706 IPR001932 -
Chy11g01233 715 Pfam Protein phosphatase 2C 439 655 IPR001932 -
Chy11g01233 715 SUPERFAMILY PP2C-like 264 707 IPR036457 -
Chy11g01233 715 SMART PP2C_4 251 704 IPR001932 -
Chy11g01233 715 Gene3D - 228 711 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy11g01233 Chy-Chr11:18459664 Chy02g00538 Chy-Chr2:3239014 1.39E-38 dispersed
Chy06g02129 Chy-Chr6:25615092 Chy11g01233 Chy-Chr11:18459664 3.78E-46 transposed
Chy11g01233 Chy-Chr11:18459664 Chy08g00754 Chy-Chr8:15251821 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g01233 - - csv:101222644 1396.33