Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g01268 ATGAGGAGTGTGTTCTTCAATTCTCCAATTTCTTCTTCTGTACCGAGCACGCCGTCGTCCTCGCACTCGTCGTCTCGACCCACTTTATCGGATTCAATGGTTGAGGAGAATCTTGAAGTTGCAGAATCTTTTGTGATGAGGTGGAGACCTGATTCCACCATTGTTGGTTCTTTGTTTCGAGGAGATGACCGTGATGAAGCTCGGAAGTATATCAAAGCCGTTAAGGGTTTGTATAATTCCATGCATAGCCTTGCTTCTCGGGATTCATCTTCCCGGAAGCTTATGCGTGCTCATGATTTGATGAAGATAGCTATGGAGAGGCTACAGAAAGAGTTTTATCAGATCTTGTCAGCTAATCGAGAGTATTTGTATCCGGAATCGGTTTCTGGCATCCAATCGCCGATGACGATATCGGCCAGATCGAGTGTTTCTGATTTTGAATTGGAATCGGAAGATGAATTCCGATTTGCTAATGAATTTATTGCGGAGGTTGAGCGAGTGTCTATGTCGGCTATGGCGGATTTGAAAGCAATTGCGGATTGTATGATATCGACGGGCTATGGTAAGGAATGTGTGAAGGTTTATAAAAGTGTGAGGAAGTCGATAATTGATGAGAGTCTCTATAATCTAGGGATTGAGAAATTGAGTTTTTCGAAAGTTCAGAAGATGGATTGGGAGGTTCTGGAAATCAAAATCAAAATCTGGTTGAAAGGTGTGAAAACGGCAGTGAAGTCTTTGTTTGAAGGAGAGAAAATTCTTTGCGATCATGTTTTCTCAGGTTCCGTTCCAATCAGAGAATCGTGCTTCGCTCAAATTTCCAAAGACGGAGCAGAAATTCTGTTTGGATTTCCAGAATTAGTTGCGAAATACAAGAAAACTCCGGAGAAAATTTTCATTACGCTAGATCTATACGAAGCCATAGCCGATCTCTGGCCGGAGATCGATTACATTTTCTCATCCACAGCAACATCAATGATACAGTCACAAGCCGTCAGCTCACTAATCAAACTCGGAGAGAACATTCGAACATTACTCTCAGAATTCGAAATGGCTATTCAGAAAGAATCATCGAAAACGCCTGTTCCTAGAGGCGGTGTTCATCCACTCACTCGCTACGTGATGAACTACATCTCATTCCTCTCCGATTACAGTGGCATACTAAACGACATTGTAGCCGATTGGTCTTTAGCAACAAAATTATCAATGCCAGAATCATATTACGGAACACCTAAACAAGAAGATAGTCCAATTACCTTACGTTTCGCTTGGTTGATTCTCGTCCTCCTTTGCAAACTCGACGGCAAAGCAGAGCATTACAACGATGTCGCTCTCTCCTACTTGTTCTTAGCAAACAATCTCCAGTACATCGTTGAAAAAGTCCGTACCTCGAATCTGAGATTCATCCTCGGCAGCGACTGGGTTGAGAGACACGAATCGAAGATCAAACTGTACTCCTCCAAGTACAGACGCATTGGATGGAGTGGAGTTTTCTCGTCGCTACCGACGGATGTGACGGCTGAAATATCGCCGGAGGAAGCAAGAGAATCGTTTATAAATTTCAACAGAGCTTTTGAAGAAACTTACAGAAAACAAACCTCATGGATCGTCCCCGATCAGAAGCTTCGCGATGAACTAAAGATCTTATTAGCGAGGGAAATGGGAGCTCTCTATGGCGAGTTTTACAGGAGGAATCGGGTTCGGGTTAGGCGGGTTTCTGGGTCGGATCATGTGGTCAGATTATCGCCTGATGATTTGGGTAACTATTTATCGGATCTATTTTACGGGCATGGATCCGATAGTGTTGGGAGCGGGTCCTCGTCTCATGCATCCTCCCACTCCTCGCCGTCTTCCCGAGGGAGATTGGCCCGTTGA 1872 44.18 MRSVFFNSPISSSVPSTPSSSHSSSRPTLSDSMVEENLEVAESFVMRWRPDSTIVGSLFRGDDRDEARKYIKAVKGLYNSMHSLASRDSSSRKLMRAHDLMKIAMERLQKEFYQILSANREYLYPESVSGIQSPMTISARSSVSDFELESEDEFRFANEFIAEVERVSMSAMADLKAIADCMISTGYGKECVKVYKSVRKSIIDESLYNLGIEKLSFSKVQKMDWEVLEIKIKIWLKGVKTAVKSLFEGEKILCDHVFSGSVPIRESCFAQISKDGAEILFGFPELVAKYKKTPEKIFITLDLYEAIADLWPEIDYIFSSTATSMIQSQAVSSLIKLGENIRTLLSEFEMAIQKESSKTPVPRGGVHPLTRYVMNYISFLSDYSGILNDIVADWSLATKLSMPESYYGTPKQEDSPITLRFAWLILVLLCKLDGKAEHYNDVALSYLFLANNLQYIVEKVRTSNLRFILGSDWVERHESKIKLYSSKYRRIGWSGVFSSLPTDVTAEISPEEARESFINFNRAFEETYRKQTSWIVPDQKLRDELKILLAREMGALYGEFYRRNRVRVRRVSGSDHVVRLSPDDLGNYLSDLFYGHGSDSVGSGSSSHASSHSSPSSRGRLAR* 624
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 18902583 18904454 - Chy11G198480.1 Chy11g01268 237029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g01268 623 SUPERFAMILY Cullin repeat-like 57 593 IPR016159 -
Chy11g01268 623 MobiDBLite consensus disorder prediction 601 623 - -
Chy11g01268 623 MobiDBLite consensus disorder prediction 1 32 - -
Chy11g01268 623 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 21 600 - -
Chy11g01268 623 Pfam Exo70 exocyst complex subunit 235 591 IPR046364 GO:0000145|GO:0005546|GO:0006887
Chy11g01268 623 Gene3D Exocyst complex component Exo70 53 600 - -
Chy11g01268 623 PANTHER EXOCYST COMPLEX PROTEIN EXO70 21 600 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g02117 Chy-Chr4:26479891 Chy11g01268 Chy-Chr11:18902583 0 dispersed
Chy11g01268 Chy-Chr11:18902583 Chy12g00132 Chy-Chr12:1479268 0 dispersed
Chy02g01759 Chy-Chr2:18785089 Chy11g01268 Chy-Chr11:18902583 4.39E-102 transposed
Chy04g00756 Chy-Chr4:9618640 Chy11g01268 Chy-Chr11:18902583 1.51E-108 transposed
Chy07g00871 Chy-Chr7:11768668 Chy11g01268 Chy-Chr11:18902583 3.59E-91 transposed
Chy12g01170 Chy-Chr12:16583153 Chy11g01268 Chy-Chr11:18902583 2.21E-98 transposed
Chy12g01498 Chy-Chr12:18822797 Chy11g01268 Chy-Chr11:18902583 4.62E-73 transposed
Chy11g01268 Chy-Chr11:18902583 Chy08g00789 Chy-Chr8:15529608 6.48E-137 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g01268 K07195 - csv:101212978 1118.22