Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g01290 ATGGGTTGCTTTAGCCATATCAGAAAACAAAGGAAAAGATTATTAGACAGCATTCAACCAGCTTCTTCAGGCAATTCAGTAAAAGTAAAAAGGGATTTGAAAGTAAAAACAAGGGAAGAAGCAAAAGAGGTGGTTTATGAAAACGAGCACCGGTTGGGTTCAAATATAAAGAAAGAGGTTTGTGGTGAAGCAAAAACGTCAAACGAAGAGGTAAAAACGTTTACATTCCATGAACTAGCAGAAGCAACAAGAAATTTCAAGTCGGATTGCTTTCTAGGTGAAGGAGGATTTGGCAAAGTTTACAAGGGCTATTTGGCAAGGATTAACAAGCTTGTAGCTATAAAGCAACTTGATCGGAGTCGGGGTCAAGGAATAAGAGAATTCATGGTGGAAGTGGTAACATTAAGTTTGGCCAATGACCCAAATCTTGTAAAATTGATAGGCTATTGTGTTGAGGGTGATCAAAGATTGTTGGTTTACGAGTTCATGCCTTTAGGATCATTGGACAAACATTTACACGATGTTCCAGCAGGGAACAAAGTGCTTGATTGGAATACAAGAATGAAGATAGCAGTAGGAGCAGCAAAAGGGTTGGAATATTTACACAACAAAATGAGGCCAGCAGTTATATATAGAGATTTAAAATGCTCAAATATTTTGTTGGGTGAAGGTTATTGGTCAAAGCTCTCAGATTTTGGGTTAGCAAAAGTTGGTCCAAGTGGTGATAACACTCATGTGTCTACTAGAGTTATGGGCACTTATGGATATTGTGCACCAGATTATGCAATGACTGGCCAGTTGACATTCAAGTGTGATATCTACACCTTTGGGGTTGTTTTATTGGAACTAATCACGGGTAGAAAAGCTATTGATCATACAAGACCTTCAAAGGAGCTGAGTTTGGTAGCATGGGCAAGACCATTGTTTCGAGACCGAAAGAGATTCTTAGTAATGGCAGATCCAAGGTTGGATGGTCAATTTCCCACTAGAGGATTGTATCAAGCTCTTGCCATTGCAGCAATGTGTCTTCAAGAACAACCTACGATGAGACCAGCAATATCAGAAGTTGTTGCAGCTCTAAATTTTCTTGCTTCTCAAAATTATTCTCACAGGAGGGATTAG 1122 39.22 MGCFSHIRKQRKRLLDSIQPASSGNSVKVKRDLKVKTREEAKEVVYENEHRLGSNIKKEVCGEAKTSNEEVKTFTFHELAEATRNFKSDCFLGEGGFGKVYKGYLARINKLVAIKQLDRSRGQGIREFMVEVVTLSLANDPNLVKLIGYCVEGDQRLLVYEFMPLGSLDKHLHDVPAGNKVLDWNTRMKIAVGAAKGLEYLHNKMRPAVIYRDLKCSNILLGEGYWSKLSDFGLAKVGPSGDNTHVSTRVMGTYGYCAPDYAMTGQLTFKCDIYTFGVVLLELITGRKAIDHTRPSKELSLVAWARPLFRDRKRFLVMADPRLDGQFPTRGLYQALAIAAMCLQEQPTMRPAISEVVAALNFLASQNYSHRRD* 374
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 19071984 19076579 - Chy11G198700.1 Chy11g01290 237051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g01290 373 ProSitePatterns Protein kinases ATP-binding region signature. 92 115 IPR017441 GO:0005524
Chy11g01290 373 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL5-RELATED 1 370 - -
Chy11g01290 373 Gene3D Phosphorylase Kinase; domain 1 48 162 - -
Chy11g01290 373 SUPERFAMILY Protein kinase-like (PK-like) 71 366 IPR011009 -
Chy11g01290 373 SMART serkin_6 86 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy11g01290 373 PIRSF ILK 33 372 - -
Chy11g01290 373 Pfam Protein kinase domain 91 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy11g01290 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Chy11g01290 373 PANTHER OS07G0668900 PROTEIN 1 370 - -
Chy11g01290 373 Gene3D Transferase(Phosphotransferase) domain 1 163 372 - -
Chy11g01290 373 ProSiteProfiles Protein kinase domain profile. 86 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy10g00613 Chy-Chr10:12711144 Chy11g01290 Chy-Chr11:19071984 8.17E-166 dispersed
Chy11g01290 Chy-Chr11:19071984 Chy12g00891 Chy-Chr12:14274954 0 dispersed
Chy10g00876 Chy-Chr10:14569619 Chy11g01290 Chy-Chr11:19071984 1.62E-45 transposed
Chy11g01290 Chy-Chr11:19071984 Chy04g02100 Chy-Chr4:26381217 5.84E-166 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71569 PF00069 Pkinase 1.80E-41 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g01290 - - csv:101221327 724.161