Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy11g01294 | ATGTTTGATCTTAATCTCAATGTTGGCTCGCCTGATGCGGCTCAGAAGGAGGACTCCGTTGTGTTCTTTGAGAAGCTTCCTCAAGGTTCGGGGAACCAAATGGATGAATCAGGAACTTCCAATTCTTCGATTGTCAATGCGGATACCTCCAGCAATGGTGGCGATGATGACTCGTGCTCCACACGCGCCGGTGGTGAGCTCTTCACGTTTAACTTCGAGATATTGAAGGCTGGAAGCGCAAACGACGTTGTCACGAAAGAGCTTTTTCCAATAGGTGGAACGGTGAATGCTGACTTCGGGATTCTTCAAGGGCATAACTCCGCCTCTTCTTCCTCCACTTCATCGAGGAAGAACTGGATCAACCTTGCGTTTGATCGAAGCGGGTCGGCAGGGGAGGGGAGAATGGTTCAGCCGGTTCAGCCTCAGCCGGTGAAGAAGAGCAGGAGGGGACCGAGGTCTCGGAGCTCACAGTACAGGGGCGTCACATTCTACCGGAGGACTGGGCGGTGGGAATCTCATATCTGGGACTGCGGGAAGCAAGTCTATCTCGGTGGATTCGACACTGCACATTCTGCAGCAAGAGCATATGATCGAGCTGCTATCAAGTTCAGAGGGGTTGATGCTGACATTAATTTCAATCTTAGTGATTATGAGGATGATCTGAAACAGATGAAGAATTTAAGCAAGGAAGAGTTTGTTCACATACTTCGTCGCCAGAGTACTGGTTTCTCAAGAGGGAGCTCCAAATATAGAGGGGTGACACTGCACAAATGTGGCCGATGGGAAGCTAGGATGGGGCAGCTCCTTGGGAAAAAGTATATATATCTTGGGCTATTCGACAGCGAGGTAGAAGCTGCAAGGGCTTATGACAAAGCAGCAATCAAATGTAATGGGCGGGAGGCAGTAACAAATTTTGAGCCTAGCACATACGGAGAGAGAATTTCTGAGGGCAGCAGTGAAGGTGGGTGGAACATGCTCGATTTGAATTTAGGGATTTCGCCTCCCTCACTTGACAACTCTCCAAAGGATTCTGAGGGGCATCTGCGGTTTCAATCTGGTTCTTGTTATGCTAATGACAGGAGCACAATGATGGAAAGCAATGCTGATGCAGCAGTTGGCGATCCACCTATGAAAGGACCGGTAATCACATCAGAGCATGCTCCCTTATGGAATGGTTTACAAACAAGCTTCCTTCCCAGTGAGGAAATCGTGACAGAGAAGAGACTTGCATTAGGTTCATCCCAAGGAATTCCCCCCAACTGGGGATGGCAAATTCATAGCCAGGTTAATGCCACCCAAGTGCCACTGTTCTCTGCTGCAGCATCATCAGGATTCTCATTTTCAGCTACCCATTTCCCGGCTGCCATCCATCCACTGTGCCGTCCGGGCTCGACTGCCCATAACCTCCATTTCACTACACCCAAAGCTTCTTCCCTCAACTCCCCCCAGCATCATCATCACCACCAGTTGAACCCACAACAGGCACCACCATAA | 1494 | 49.67 | MFDLNLNVGSPDAAQKEDSVVFFEKLPQGSGNQMDESGTSNSSIVNADTSSNGGDDDSCSTRAGGELFTFNFEILKAGSANDVVTKELFPIGGTVNADFGILQGHNSASSSSTSSRKNWINLAFDRSGSAGEGRMVQPVQPQPVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHSAARAYDRAAIKFRGVDADINFNLSDYEDDLKQMKNLSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQLLGKKYIYLGLFDSEVEAARAYDKAAIKCNGREAVTNFEPSTYGERISEGSSEGGWNMLDLNLGISPPSLDNSPKDSEGHLRFQSGSCYANDRSTMMESNADAAVGDPPMKGPVITSEHAPLWNGLQTSFLPSEEIVTEKRLALGSSQGIPPNWGWQIHSQVNATQVPLFSAAASSGFSFSATHFPAAIHPLCRPGSTAHNLHFTTPKASSLNSPQHHHHHQLNPQQAPP* | 498 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 19151202 | 19154380 | - | Chy11G198740.1 | Chy11g01294 | 237055 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy11g01294 | 497 | ProSiteProfiles | AP2/ERF domain profile. | 157 | 213 | IPR001471 | GO:0003700|GO:0006355 | |
Chy11g01294 | 497 | CDD | AP2 | 157 | 215 | IPR001471 | GO:0003700|GO:0006355 | |
Chy11g01294 | 497 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-7 | 1 | 457 | - | - | |
Chy11g01294 | 497 | Gene3D | AP2/ERF domain | 156 | 214 | IPR036955 | GO:0003700|GO:0006355 | |
Chy11g01294 | 497 | Gene3D | AP2/ERF domain | 248 | 307 | IPR036955 | GO:0003700|GO:0006355 | |
Chy11g01294 | 497 | CDD | AP2 | 248 | 308 | IPR001471 | GO:0003700|GO:0006355 | |
Chy11g01294 | 497 | MobiDBLite | consensus disorder prediction | 467 | 497 | - | - | |
Chy11g01294 | 497 | Pfam | AP2 domain | 157 | 205 | IPR001471 | GO:0003700|GO:0006355 | |
Chy11g01294 | 497 | Pfam | AP2 domain | 248 | 298 | IPR001471 | GO:0003700|GO:0006355 | |
Chy11g01294 | 497 | MobiDBLite | consensus disorder prediction | 130 | 158 | - | - | |
Chy11g01294 | 497 | ProSiteProfiles | AP2/ERF domain profile. | 249 | 306 | IPR001471 | GO:0003700|GO:0006355 | |
Chy11g01294 | 497 | PRINTS | Ethylene responsive element binding protein signature | 250 | 261 | IPR001471 | GO:0003700|GO:0006355 | |
Chy11g01294 | 497 | PRINTS | Ethylene responsive element binding protein signature | 288 | 308 | IPR001471 | GO:0003700|GO:0006355 | |
Chy11g01294 | 497 | MobiDBLite | consensus disorder prediction | 30 | 58 | - | - | |
Chy11g01294 | 497 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 1 | 457 | - | - | |
Chy11g01294 | 497 | MobiDBLite | consensus disorder prediction | 28 | 58 | - | - | |
Chy11g01294 | 497 | SUPERFAMILY | DNA-binding domain | 156 | 214 | IPR016177 | GO:0003677 | |
Chy11g01294 | 497 | SUPERFAMILY | DNA-binding domain | 248 | 307 | IPR016177 | GO:0003677 | |
Chy11g01294 | 497 | SMART | rav1_2 | 249 | 312 | IPR001471 | GO:0003700|GO:0006355 | |
Chy11g01294 | 497 | SMART | rav1_2 | 157 | 219 | IPR001471 | GO:0003700|GO:0006355 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy10g00619 | Chy-Chr10:12785616 | Chy11g01294 | Chy-Chr11:19151202 | 2.89E-81 | dispersed | |
Chy11g00229 | Chy-Chr11:2147611 | Chy11g01294 | Chy-Chr11:19151202 | 6.69E-104 | dispersed | |
Chy11g01294 | Chy-Chr11:19151202 | Chy04g00696 | Chy-Chr4:8352238 | 2.75E-09 | dispersed | |
Chy11g01294 | Chy-Chr11:19151202 | Chy04g02096 | Chy-Chr4:26347995 | 7.68E-125 | wgd | |
Chy11g01294 | Chy-Chr11:19151202 | Chy08g00813 | Chy-Chr8:15713566 | 8.00E-126 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
18751 | PF00847 | AP2 | 3.10E-09 | CL0081 | Chy | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy11g01294 | K09284 | - | csv:101222024 | 926.776 |