Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g01306 ATGGAAGAGTTCCTAGACAATATACCTCCCATGGATCTGATGCGTTCCGAGAAGATGACTTTTGTTCAGCTCATTATCCCTGTTGAGTCCGCTCATCGAGCCATTTCATATCTTGGCGAGCTTGGCATCCTTCAATTTAGAGATTTAAACGTGGACAAAAGTCCTTTCCAGAGAACCTTTGTTAACCAGGTAAAGCGATGTGCAGAGATGTCAAGGAAGCTAAGATTTTTCAAAGATCAAATCAGTAAAGCTGGTGTACTGGCATCTACACGCCCAATTCTTCAAGAACATATTGAACTAGAGGATTTAGAGATACGACTGGCTGATCATGAGCATGAGCTGATTGAAATGAACTCTAACAGTGAGAAACTTCGACAGTCATATAATGAACTATTAGAATTCAAGATGGTATTGCAAAAGGCAAGCGTCTTTCTGGTGTCCAGTAATAGCCATTCAGTTTCTGAAGAAAGGGAGTTGAATGAAAATGTTTTCTTGAATGATAGCTATGTTGAGGATGGATCATTACTTGAACGGGAAATGAGACCTGGACCATCCAACCAATCTGGTTTGAGATTTATTTGTGGAATTATTTGTAAATCCAAAGTTCTTAGATTTGAAAGGATGTTGTTCCGTGCGACAAGGGGAAACATGCTTTTCAATCAGGCACCAGCTGATGTACAGATCGTGGATCCCATATCTACAGAAATGGTTGAGAAAACAGTATTTGTTGTGTTTTTCTCTGGGGAGCAGGCCCGAAACAAAGTTTTGAAGATCTGTGAGGCTTTTGGAGCAAATTGCTATCCTGTTCCTGAAGATATAACCAAACAGAGGCAGATAACTAGAGAAGTATCATCTCGCCTCACGGAACTTGAGGCCACTTTAGATGCTGGGATCCGACACCGAAACGAGGCTCTTGCATCAATAGGGTTTCACTTGATTAAATGGATGAATATGGTAAGAAGGGAAAAGGCTGTATATGATACGTTAAACATGTTGAATTTTGATGTCACTAAAAAATGTCTTGTTGGAGAAGGATGGTGCCCAATCTTTGCCAAAACTCAGATTCAAGAGGCACTACAGCGAGCAACATTTGATAGTAGTTCACAAGTGGGGATAATATTTCATGTGATGGATACGGTTGAATCCCCTCCTACACATTTTAGAACAAACCGTTTGACAAATGCTTTTCAAGAAATTGTTGACGCCTATGGTGTTGCTAGATATCAAGAAGCAAATCCTACAGTTTACACTGTTATTACATTTCCATTCCTATTCGCAGTGATGTTTGGGGATTGGGGTCATGGAATATGCTTGTTGCTTGGAGCTTTAGTTCTTATAGCTCGTGAAAGTAAGCTCAATAATCAGAAATTAGGAAGCTTTATGGAGATGCTATTTGGTGGCCGCTATGTCCTTCTTTTGATGTCCCTATTTTCAATTTATTGTGGGTTAATCTACAATGAGTTCTTCTCTGTTCCATATCATATATTTGGTGCATCTGCTTACAAGTGTCGAGATAATTCATGCAGTGATGCCCACACTGTTGGCTTAGTTAAATACCGTGATCCATATCCATTCGGTGTTGACCCAAGCTGGCGTGGAAGTCGTTCAGAACTTCCTTTTCTGAATTCTCTTAAAATGAAGATGTCTATCTTGTTGGGTATAGCTCAAATGAACTTAGGGATCATATTGAGTTATTTTAATGCCCGTTTTACTGGAAGCTCAATCGATATCAGGTACCAGTTTATACCACAAGTGATCTTCCTTAATAGCCTTTTTGGATATCTTTCTCTTCTCATTGTCATCAAGTGGTGCACCGGATCTCAAGCAGACCTCTATCATGTGATGATTTACATGTTTTTAAGCCCATTTGAGGATCTTGGTGAGAACGAACTGTTTTGGGGCCAAAGACCTCTTCAAATTATATTGTTGATGTTGGCGATAGTTGCAGTGCCTTGGATGCTTTTTCCTAAACCCTTTATTTTGAAAAAGATGCACACAGAGAGATTTCAAGGCCGTACTTATGGAATGCTTGGAACCTCTGAGATTGATCTTGAGGTGGAACCTGATTCAGCAAGGCAACACCAAGAGGACTTCAATTTTAGTGAGATTTTTGTTCACCAAATGATTCACTCCATAGAATTCGTCTTGGGTGCAGTTTCAAATACAGCATCCTATCTCCGACTTTGGGCTTTAAGCTTGGCGCACTCAGAACTGTCAACAGTTTTCTATGAGAAAGTACTACTCTTAGCTTGGGGGTATGACAGCTTTGTCATTCGGCTGATTGGTTTAGCTGTTTTTTCGTTTGCAACTGCTTTCATACTTCTTATGATGGAGACCCTCAGTGCCTTCCTTCATGCCTTGCGTCTTCATTGGGTCGAGTTTCAAAATAAGTTCTACCATGGTGATGGCCACAAGTTCAAACCTTTTTCCTTTGCTTCCATCGATGAGGACGAAGATTAA 2460 40.28 MEEFLDNIPPMDLMRSEKMTFVQLIIPVESAHRAISYLGELGILQFRDLNVDKSPFQRTFVNQVKRCAEMSRKLRFFKDQISKAGVLASTRPILQEHIELEDLEIRLADHEHELIEMNSNSEKLRQSYNELLEFKMVLQKASVFLVSSNSHSVSEERELNENVFLNDSYVEDGSLLEREMRPGPSNQSGLRFICGIICKSKVLRFERMLFRATRGNMLFNQAPADVQIVDPISTEMVEKTVFVVFFSGEQARNKVLKICEAFGANCYPVPEDITKQRQITREVSSRLTELEATLDAGIRHRNEALASIGFHLIKWMNMVRREKAVYDTLNMLNFDVTKKCLVGEGWCPIFAKTQIQEALQRATFDSSSQVGIIFHVMDTVESPPTHFRTNRLTNAFQEIVDAYGVARYQEANPTVYTVITFPFLFAVMFGDWGHGICLLLGALVLIARESKLNNQKLGSFMEMLFGGRYVLLLMSLFSIYCGLIYNEFFSVPYHIFGASAYKCRDNSCSDAHTVGLVKYRDPYPFGVDPSWRGSRSELPFLNSLKMKMSILLGIAQMNLGIILSYFNARFTGSSIDIRYQFIPQVIFLNSLFGYLSLLIVIKWCTGSQADLYHVMIYMFLSPFEDLGENELFWGQRPLQIILLMLAIVAVPWMLFPKPFILKKMHTERFQGRTYGMLGTSEIDLEVEPDSARQHQEDFNFSEIFVHQMIHSIEFVLGAVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDSFVIRLIGLAVFSFATAFILLMMETLSAFLHALRLHWVEFQNKFYHGDGHKFKPFSFASIDEDED* 820
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 19304033 19313672 - Chy11G198860.1 Chy11g01306 237067
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g01306 819 PIRSF ATP6V0A1 9 819 IPR026028 GO:0000220|GO:0046961
Chy11g01306 819 Pfam V-type ATPase 116kDa subunit family 37 811 IPR002490 GO:0033179|GO:0046961|GO:1902600
Chy11g01306 819 PANTHER VACUOLAR PROTON ATPASE A1 5 819 - -
Chy11g01306 819 PANTHER VACUOLAR PROTON ATPASES 5 819 IPR002490 GO:0033179|GO:0046961|GO:1902600
Chy11g01306 819 Coils Coil 93 127 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00757 Chy-Chr1:5656055 Chy11g01306 Chy-Chr11:19304033 0 dispersed
Chy11g01306 Chy-Chr11:19304033 Chy03g01413 Chy-Chr3:16871625 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g01306 K02154 - csv:101216514 1633.23