Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g01314 ATGACACCAAACCTTCATACCAAGATCAACAATGATAATCATGAGGAATTGCCTGAATCTCAAAGGGCAGATGCAGTGAGCAGCTTGGTTTATGAAGCAAGTGCAAGGATTAGAGACCCTGTTTATGGGTCAGCTGGGGCCATTTGCCAACTCCAAAAGCAAGTCAATGAGCTTCAAGCCCAACTAGCCAAAGCTCAGGCAGAGGTTGTCAACATGCAATGCCAACAAGCCAATCTTGTGGCCTTTGTTTGCAGGGAATTGGCTCAATCTCATCAATCTTTTGATGAATTCAATGGCAGCCCACATAATGGATTATTACAGAGCATTCATCCTTCAAGTTACTTTGATGATAGCAATAACGTAAACTCATTGTGGGAACCTCTTTGGACATGA 393 43.0 MTPNLHTKINNDNHEELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFNGSPHNGLLQSIHPSSYFDDSNNVNSLWEPLWT* 131
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 19396267 19398808 + Chy11G198940.1 Chy11g01314 237075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g01314 130 Pfam Lateral organ boundaries (LOB) domain 15 66 IPR004883 -
Chy11g01314 130 ProSiteProfiles LOB domain profile. 1 69 IPR004883 -
Chy11g01314 130 Coils Coil 48 75 - -
Chy11g01314 130 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1-LIKE 15 127 - -
Chy11g01314 130 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 15 127 - -
Chy11g01314 130 MobiDBLite consensus disorder prediction 1 21 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy11g01314 Chy12g00863 CCT
Chy11g01314 Chy12g00863 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy10g00629 Chy-Chr10:12861315 Chy11g01314 Chy-Chr11:19396267 3.80E-42 dispersed
Chy11g01314 Chy-Chr11:19396267 Chy12g00861 Chy-Chr12:13837624 3.78E-39 dispersed
Chy11g01314 Chy-Chr11:19396267 Chy11g01024 Chy-Chr11:14506810 1.44E-22 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18753 PF03195 LOB 4.70E-15 No_clan Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g01314 - - csv:101215067 218.394