Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g01323 ATGGGGAAAGAGAAGGCTCACATTAACATTGTGGTTATTGGCCATGTCGACTCTGGGAAATCTACCACCACCGGGCATTTGATCTATAAGCTTGGTGGTATTGACAAGCGTGTCATTGAAAGGTTTGAGAAGGAAGCTGCTGAGATGAACAAGAGGTCCTTCAAGTATGCTTGGGTGTTGGACAAGCTTAAGGCTGAACGTGAACGTGGTATTACCATTGATATTGCTTTGTGGAAGTTTGAAACCACCAAATACTACTGCACCGTTATTGATGCTCCTGGACATCGTGATTTTATTAAGAACATGATTACTGGTACCTCACAAGCTGATTGTGCTGTTCTCATTATTGATTCCACTACTGGTGGTTTTGAAGCTGGTATTTCTAAGGATGGTCAAACACGTGAGCATGCTTTGCTCGCGTTTACTCTCGGTGTCAAGCAGATGATTTGCTGCTGCAACAAGATGGATGCCACCACCCCCAAGTACTCCAAGGCAAGGTATGATGAAATTGTCAAGGAAGTTTCTTCCTACCTCAAAAAGGTTGGATACAACCCTGACAAAATTCCCTTTGTTCCCATCTCTGGTTTCGAAGGAGACAACATGATTGAGAGGTCAACCAACCTTGACTGGTACAAGGGTTCAACTCTCCTTGAGGCTCTTGACTTGATCCAGGAGCCCAAAAGGCCCTCAGACAAGCCACTCCGTCTTCCACTTCAGGATGTGTACAAGATCGGTGGTATTGGAACTGTACCAGTCGGTCGTGTTGAGACTGGTGTCCTCAAACCTGGAATGGTGGTCACTTTTGGCCCTACTGGATTGACCACTGAAGTCAAGTCTGTTGAGATGCACCACGAAGCTCTACCCGAGGCTGTTCCTGGTGACATGTGGGATTCAATGTGA 900 46.11 MGKEKAHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGSTLLEALDLIQEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPTGLTTEVKSVEMHHEALPEAVPGDMWDSM* 300
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 19446294 19447284 + Chy11G199030.1 Chy11g01323 237084
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g01323 299 PRINTS GTP-binding elongation factor signature 148 157 IPR000795 GO:0003924|GO:0005525
Chy11g01323 299 PRINTS GTP-binding elongation factor signature 68 76 IPR000795 GO:0003924|GO:0005525
Chy11g01323 299 PRINTS GTP-binding elongation factor signature 104 115 IPR000795 GO:0003924|GO:0005525
Chy11g01323 299 PRINTS GTP-binding elongation factor signature 9 22 IPR000795 GO:0003924|GO:0005525
Chy11g01323 299 PRINTS GTP-binding elongation factor signature 88 98 IPR000795 GO:0003924|GO:0005525
Chy11g01323 299 CDD EF1_alpha_II 230 294 - -
Chy11g01323 299 PANTHER TRANSLATION FACTOR 1 294 - -
Chy11g01323 299 SUPERFAMILY Translation proteins 226 295 IPR009000 -
Chy11g01323 299 Pfam Elongation factor Tu domain 2 248 294 IPR004161 GO:0005525
Chy11g01323 299 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 61 76 IPR031157 -
Chy11g01323 299 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 249 IPR027417 -
Chy11g01323 299 Gene3D Translation factors 229 297 - -
Chy11g01323 299 Pfam Elongation factor Tu GTP binding domain 6 221 IPR000795 GO:0003924|GO:0005525
Chy11g01323 299 Gene3D - 1 226 IPR027417 -
Chy11g01323 299 CDD EF1_alpha 9 227 - -
Chy11g01323 299 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 5 230 IPR000795 GO:0003924|GO:0005525
Chy11g01323 299 PANTHER ELONGATION FACTOR 1-ALPHA 1 1 294 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy09g00715 Chy-Chr9:9594466 Chy11g01323 Chy-Chr11:19446294 0 dispersed
Chy09g00716 Chy-Chr9:9600073 Chy11g01323 Chy-Chr11:19446294 0 dispersed
Chy11g01323 Chy-Chr11:19446294 Chy12g01412 Chy-Chr12:18213333 7.22E-73 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g01323 K03231 - csv:101213221 592.038