Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chy11g01324 | ATGAACCACCCTGGACAAATTGGCAATGGTTATGCTCCAGTGCTTGATTGCCACACATCTCATATTGCGGTGAAATTTGCCGAGATTCTAACCAAAATCGACAGGCGATCCGGTAAGGAACTTGAGAAGGAACCCAAGTTCTTAAAGAATGGTGATGCAGGTATGATTAAGATGATTCCCACCAAACCTATGGTGGTGGAAACCTTCTCTCAGTACCCTCCTCTTGGACGTTTCGCCGTAAGAGACATGAGACAGACAGTTGCTGTTGGTGTCATCAAGTCCGTCGAAAAGAAGGATCCAAGTGGGGCTAAGGTTACTAAATCCGCAGCCAAGAAGGGTGGAAAGTGA | 348 | 46.55 | MNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIPTKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDPSGAKVTKSAAKKGGK* | 116 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 19447386 | 19447733 | + | Chy11G199040.1 | Chy11g01324 | 237085 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chy11g01324 | 115 | CDD | EF1_alpha_III | 1 | 92 | - | - | |
| Chy11g01324 | 115 | Pfam | Elongation factor Tu C-terminal domain | 4 | 95 | IPR004160 | - | |
| Chy11g01324 | 115 | PANTHER | BNAC08G43440D PROTEIN | 1 | 113 | - | - | |
| Chy11g01324 | 115 | Gene3D | Translation factors | 1 | 96 | - | - | |
| Chy11g01324 | 115 | SUPERFAMILY | EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain | 1 | 95 | IPR009001 | - | |
| Chy11g01324 | 115 | PANTHER | TRANSLATION FACTOR | 1 | 113 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Chy11g01324 | Chy-Chr11:19447386 | Chy12g01412 | Chy-Chr12:18213333 | 2.41E-10 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chy11g01324 | K03231 | - | csv:101213221 | 233.417 |