Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g01330 ATGGCCGGAGGTGGCGCCGGAAGGTCCTTGGAAGAGACGCCGACATGGGCCGTCGCCGCCGTGTGCTTTGTTTTGGTTCTGATTTCTATTATCATCGAACACATTCTCCATCTCATCGGAAAGTGGCTAAAGAAGAAACACAAACGAGCTCTCTACGAAGCTCTGGAGAAGATTAAATCAGAACTGATGCTGTTGGGATTCATATCGCTGCTGCTGACGGTGGGACAAAGCCTAATCACAAATGTTTGTATACCACCTGACGTGGCAGCCACGTGGCATCCATGTAGTCCTCATAGAGAAGAAGAATTAACTAAAGAAGCTGACCTCGTCGATTCCGACCAAAATCGTCGAAAACTTCTCGCCCTCTCCCATCACGTCAACGCGACCTTCCGCCGTTCCCTCGCCGCTGCCGGTGGTACCGACAAATGTGCTGCCAAGGGTAAAGTTCCGTTTGTATCGGAAGGGGGTATTCATCAGCTACATATATTCATCTTCGTATTGGCAGTTTTCCATGTTTTGTATTGTGTTTTAACTTTAGCTTTGGGCAATGCCAAGATGAGGAGTTGGAAGTCATGGGAAAAAGAGACAAGAACTGTGGAGTATCAATTCTCACACGATCCGGAACGGTTTCGATTTGCAAGAGACACGTCATTTGGGAGAAGACATTTAAGCTTTTGGACAAAATCCCCTTTCCTCATATGGATTGTTTGTTTCTTCAGACAATTCGTTAGGTCGGTTCCAAAGGTTGATTACTTGACCTTAAGACATGGTTTCGTCATGGCACATCTGGCACCGCACAGCGATCAGAAATTTGACTTTCAAAAATACATAAAACGATCTCTTGAAGAAGATTTCAAGGTGGTGGTCAGTATCAGCCCTCCGATATGGTTCTTTGCTGTCCTCTTCCTACTTTTCAACACCCACGGGTGGAGGGCTTATCTATGGCTACCCTTTGTTCCATTAATTATAGTGTTATTGGTGGGGACAAAGTTGCAAGTGATAATAACAAAAATGGCACTGAGGATACAAGAAAGAGGAGAAGTGGTGAAAGGAGTGCCGGTGGTAGAGCCAGGGGATGACCTTTTTTGGTTCAATCGCCCTCGTCTTATTCTTTACCTTATCAATTTTGTCCTCTTCCAGAATGCTTTTCAGCTTGCCTTTTTTGCTTGGACTTGGAAAGAATTTGGGATGAAATCTTGTTTCCATGAGCACACAGAGGATTTGGTCATCAGAATAACAATGGGAGTTCTAGTTCAAATCCTTTGCAGTTATGTCACATTGCCACTCTACGCTCTAGTCACACAGATGGGTTCGACGATGAAGCCCACGATTTTCAACGAAAGAGTAGCGACGGCGTTGAGAAATTGGCACCACACTGCTCGTAAACACATAAAACAAAATCGTGGCTCAATGACGCCAATGTCGAGCCGCCCCGCGACCCCCTCCCACCACTTGTCACCGGTCCACCTCCTCCGCCACTATCGGAGCGAATTAGATAGCGTTCATACCTCTCCTAGAAGATCCAATTTCGACACCGATCAGTGGGACCCTGATTCCCCTTCCCCTTCCCCTTCCCACCATTTTCACCGCCGCCCCCATCCTGGCGACGGCTCCATTTCCAACCATCACCGTGATGTGGAGGCTGGGGATCTTGATGCCGATGTCGAATCGCCTCAACCCGATCGGACGATCCAATCAATAAACCCAACAAATGTTGAGCAACACGAAATTGATGTGGGGTCTAATGAATTCTCATTCGATAGAAGAGTTGATAGAGTATAA 1782 46.8 MAGGGAGRSLEETPTWAVAAVCFVLVLISIIIEHILHLIGKWLKKKHKRALYEALEKIKSELMLLGFISLLLTVGQSLITNVCIPPDVAATWHPCSPHREEELTKEADLVDSDQNRRKLLALSHHVNATFRRSLAAAGGTDKCAAKGKVPFVSEGGIHQLHIFIFVLAVFHVLYCVLTLALGNAKMRSWKSWEKETRTVEYQFSHDPERFRFARDTSFGRRHLSFWTKSPFLIWIVCFFRQFVRSVPKVDYLTLRHGFVMAHLAPHSDQKFDFQKYIKRSLEEDFKVVVSISPPIWFFAVLFLLFNTHGWRAYLWLPFVPLIIVLLVGTKLQVIITKMALRIQERGEVVKGVPVVEPGDDLFWFNRPRLILYLINFVLFQNAFQLAFFAWTWKEFGMKSCFHEHTEDLVIRITMGVLVQILCSYVTLPLYALVTQMGSTMKPTIFNERVATALRNWHHTARKHIKQNRGSMTPMSSRPATPSHHLSPVHLLRHYRSELDSVHTSPRRSNFDTDQWDPDSPSPSPSHHFHRRPHPGDGSISNHHRDVEAGDLDADVESPQPDRTIQSINPTNVEQHEIDVGSNEFSFDRRVDRV* 594
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 19515892 19521162 + Chy11G199100.1 Chy11g01330 237091

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g01330 593 MobiDBLite consensus disorder prediction 500 570 - -
Chy11g01330 593 PANTHER MLO-LIKE PROTEIN 1 1 548 IPR004326 GO:0006952|GO:0016021
Chy11g01330 593 MobiDBLite consensus disorder prediction 461 484 - -
Chy11g01330 593 PANTHER MLO-LIKE PROTEIN 1 548 - -
Chy11g01330 593 MobiDBLite consensus disorder prediction 466 482 - -
Chy11g01330 593 MobiDBLite consensus disorder prediction 523 557 - -
Chy11g01330 593 Pfam Mlo family 8 494 IPR004326 GO:0006952|GO:0016021
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g01330 K08472 MLO; mlo protein - csv:101212018 1154.04
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Chy11g01330 Chy12g00872 CCT
Chy11g01330 Chy12g00872 ECH
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00267 Chy-Chr2:1738800 Chy11g01330 Chy-Chr11:19515892 2.77E-136 dispersed
Chy06g02292 Chy-Chr6:26820514 Chy11g01330 Chy-Chr11:19515892 1.26E-168 dispersed
Chy10g01335 Chy-Chr10:17658489 Chy11g01330 Chy-Chr11:19515892 0 dispersed
Chy11g01330 Chy-Chr11:19515892 Chy12g00872 Chy-Chr12:14022949 0 dispersed
Chy12g00873 Chy-Chr12:14029013 Chy11g01330 Chy-Chr11:19515892 2.71E-41 dispersed
Chy11g01330 Chy-Chr11:19515892 Chy02g00500 Chy-Chr2:3050841 9.15E-177 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi6g290 . Blo03g01272 Bda02g00768 . Bpe01g00178 Bpe08g01330 . . Cmo13g00190 . Cma01g00538 . . Car13g00156 . Cpe05g00830 . Bhi08g00292 . . . Hepe10g1101 . Lcy11g0297 Cla02g02050 Cam02g2174 Cec02g2213 Cco02g2253 Clacu02g2159 Cmu02g2096 Cre02g2410 . . . . . . Chy11g01330 . . Blo14g00166 Bda07g00625 Bda09g00185 . . Bma07g00138 . Sed01g0995 Cmo02g00883 Cmo20g00511 Cma02g00883 Cma20g00477 . Car20g00418 . . Bhi10g00563 Tan05g0268 Cmetu12g1399 . Hepe08g0876 . . . . . . . . . . Csa01g01295 Chy12g00872 .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Chy09g00316 . 3 553 MLO family AT5G53760 69.6 1.1e-217 753.1
Chy07g00085 CCT 5 551 MLO family AT5G53760 69.3 6.4e-215 743.8
Chy12g00869 . 10 469 MLO family AT3G45290 55.0 1.2e-137 486.9
Chy09g00316 . 3 553 MLO family AT1G26700 68.2 1.9e-211 732.3
Chy07g00085 CCT 1 532 MLO family AT1G26700 67.9 9.6e-208 719.9
Chy10g01335 . 7 533 MLO family AT2G39200 64.2 4.5e-192 667.9
Chy11g01330 CCT,ECH 8 504 MLO family AT2G39200 66.9 2.1e-189 659.1
Chy12g00872 CCT,ECH 4 436 MLO family AT2G39200 67.0 6.5e-167 584.3
Chy12g00869 . 5 473 MLO family AT2G39200 50.1 5.2e-132 468.4
Chy11g01330 CCT,ECH 8 415 MLO family AT1G61560 66.9 2.5e-160 562.0
Chy12g00872 CCT,ECH 1 416 MLO family AT1G61560 66.8 3.1e-158 555.1
Chy10g01335 . 7 408 MLO family AT1G61560 65.7 3.0e-153 538.5
Chy02g00500 . 28 420 MLO family AT1G61560 52.7 1.2e-117 420.2
Chy02g00500 . 11 488 MLO family AT2G17430 62.9 1.7e-172 602.8
Chy06g02292 . 9 492 MLO family AT2G17430 60.5 2.0e-157 552.7
Chy03g00608 . 2 479 MLO family AT2G17430 58.4 2.8e-151 532.3
Chy12g00872 CCT,ECH 5 436 MLO family AT2G17430 50.5 5.4e-115 411.8
Chy02g00500 . 28 565 MLO family AT2G17480 64.6 4.8e-197 684.5
Chy06g02292 . 20 571 MLO family AT2G17480 58.0 3.4e-171 598.6
Chy03g00608 . 12 464 MLO family AT2G17480 62.7 3.9e-159 558.5
Chy11g01330 CCT,ECH 8 462 MLO family AT2G17480 51.2 1.3e-125 447.2
Chy12g00872 CCT,ECH 8 437 MLO family AT2G17480 52.8 5.2e-119 425.2
Chy03g00608 . 12 380 MLO family AT1G42560 62.2 1.2e-129 459.9
Chy02g00500 . 28 384 MLO family AT1G42560 58.7 3.0e-120 428.7
Chy06g02292 . 7 391 MLO family AT1G42560 52.3 1.2e-111 400.2
Chy11g01967 . 6 419 MLO family AT4G24250 53.5 1.4e-115 413.3
Chy11g00027 . 17 432 MLO family AT4G24250 51.6 2.7e-111 399.1
Chy02g00500 . 9 385 MLO family AT5G65970 66.0 1.4e-143 506.5
Chy06g02292 . 12 391 MLO family AT5G65970 62.9 3.8e-136 481.9
Chy03g00608 . 11 380 MLO family AT5G65970 59.8 2.6e-121 432.6
Chy11g01330 CCT,ECH 2 380 MLO family AT5G65970 51.2 9.1e-106 380.9
Chy12g00872 CCT,ECH 2 381 MLO family AT5G65970 51.1 8.5e-104 374.4
Chy03g00608 . 12 472 MLO family AT2G33670 66.2 9.0e-173 603.6
Chy02g00500 . 28 490 MLO family AT2G33670 60.3 2.0e-156 549.3
Chy06g02292 . 9 474 MLO family AT2G33670 56.4 3.8e-139 491.9
Chy12g00872 CCT,ECH 8 437 MLO family AT2G33670 50.9 1.6e-116 416.8
Chy10g01335 . 64 534 MLO family AT1G11310 63.5 2.3e-168 589.0
Chy11g01330 CCT,ECH 63 519 MLO family AT1G11310 63.2 2.5e-162 568.9
Chy12g00872 CCT,ECH 63 440 MLO family AT1G11310 66.7 8.4e-142 500.7
Chy11g01967 . 5 509 MLO family AT2G44110 57.8 2.1e-166 582.4
Chy11g01967 . 1 485 MLO family AT4G02600 76.1 9.4e-213 736.5
Chy06g01139 CCT 3 557 MLO family AT1G11000 66.2 1.2e-210 729.6
Chy06g02237 . 1 474 MLO family AT1G11000 51.9 2.6e-131 466.1
Chy11g01967 . 1 485 MLO family AT4G02600 76.1 9.4e-213 736.5
Chy10g01335 . 64 534 MLO family AT1G11310 63.5 2.3e-168 589.0
Chy11g01330 CCT,ECH 63 519 MLO family AT1G11310 63.2 2.5e-162 568.9
Chy12g00872 CCT,ECH 63 440 MLO family AT1G11310 66.7 8.4e-142 500.7
Chy12g00869 . 10 469 MLO family AT3G45290 55.0 1.2e-137 486.9
Chy06g01139 CCT 3 557 MLO family AT1G11000 66.2 1.2e-210 729.6
Chy06g02237 . 1 474 MLO family AT1G11000 51.9 2.6e-131 466.1
Chy03g00608 . 12 472 MLO family AT2G33670 66.2 9.0e-173 603.6
Chy02g00500 . 28 490 MLO family AT2G33670 60.3 2.0e-156 549.3
Chy06g02292 . 9 474 MLO family AT2G33670 56.4 3.8e-139 491.9
Chy12g00872 CCT,ECH 8 437 MLO family AT2G33670 50.9 1.6e-116 416.8
Chy11g01330 CCT,ECH 8 415 MLO family AT1G61560 66.9 2.5e-160 562.0
Chy12g00872 CCT,ECH 1 416 MLO family AT1G61560 66.8 3.1e-158 555.1
Chy10g01335 . 7 408 MLO family AT1G61560 65.7 3.0e-153 538.5
Chy02g00500 . 28 420 MLO family AT1G61560 52.7 1.2e-117 420.2
Chy02g00500 . 11 488 MLO family AT2G17430 62.9 1.7e-172 602.8
Chy06g02292 . 9 492 MLO family AT2G17430 60.5 2.0e-157 552.7
Chy03g00608 . 2 479 MLO family AT2G17430 58.4 2.8e-151 532.3
Chy12g00872 CCT,ECH 5 436 MLO family AT2G17430 50.5 5.4e-115 411.8
Chy02g00500 . 28 565 MLO family AT2G17480 64.6 4.8e-197 684.5
Chy06g02292 . 20 571 MLO family AT2G17480 58.0 3.4e-171 598.6
Chy03g00608 . 12 464 MLO family AT2G17480 62.7 3.9e-159 558.5
Chy11g01330 CCT,ECH 8 462 MLO family AT2G17480 51.2 1.3e-125 447.2
Chy12g00872 CCT,ECH 8 437 MLO family AT2G17480 52.8 5.2e-119 425.2
Chy03g00608 . 12 380 MLO family AT1G42560 62.2 1.2e-129 459.9
Chy02g00500 . 28 384 MLO family AT1G42560 58.7 3.0e-120 428.7
Chy06g02292 . 7 391 MLO family AT1G42560 52.3 1.2e-111 400.2
Chy02g00500 . 9 385 MLO family AT5G65970 66.0 1.4e-143 506.5
Chy06g02292 . 12 391 MLO family AT5G65970 62.9 3.8e-136 481.9
Chy03g00608 . 11 380 MLO family AT5G65970 59.8 2.6e-121 432.6
Chy11g01330 CCT,ECH 2 380 MLO family AT5G65970 51.2 9.1e-106 380.9
Chy12g00872 CCT,ECH 2 381 MLO family AT5G65970 51.1 8.5e-104 374.4
Chy09g00316 . 3 553 MLO family AT5G53760 69.6 1.1e-217 753.1
Chy07g00085 CCT 5 551 MLO family AT5G53760 69.3 6.4e-215 743.8
Chy10g01335 . 7 533 MLO family AT2G39200 64.2 4.5e-192 667.9
Chy11g01330 CCT,ECH 8 504 MLO family AT2G39200 66.9 2.1e-189 659.1
Chy12g00872 CCT,ECH 4 436 MLO family AT2G39200 67.0 6.5e-167 584.3
Chy12g00869 . 5 473 MLO family AT2G39200 50.1 5.2e-132 468.4
Chy11g01967 . 6 419 MLO family AT4G24250 53.5 1.4e-115 413.3
Chy11g00027 . 17 432 MLO family AT4G24250 51.6 2.7e-111 399.1
Chy09g00316 . 3 553 MLO family AT1G26700 68.2 1.9e-211 732.3
Chy07g00085 CCT 1 532 MLO family AT1G26700 67.9 9.6e-208 719.9
Chy11g01967 . 5 509 MLO family AT2G44110 57.8 2.1e-166 582.4
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001805 3 2 2 3 3 2 3 2 2 2 2 2 3 2 2 3 2 2 3 2 2 2 1 2 2 2 2 2 2 4 68
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Chy11g01330 Chy_Chr11 FPKM 6.738612 7.648177 8.856711 7.273138 10.55794 9.999825 11.014522 9.745099 11.178741 10.263172