Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g01342 ATGGCGCCAATCATTCCCCCATCTCTCCCCAACAAGTTCCTCCCTCTTTTCCTCCTCCTTCTCCACCTCGGCTGCTTCCTCCTCACCACCGCCTCCCCCCCCCCCCCCCCTCCCCCTTCCTGCTTCAAGCCCCGCAAGTCCTTATCCTCCTCTTTCTCTTTTCTCAAACGAATCTTCTCTTCCAAAACCTCTACCATCGCAATCGACACCGCTCGCCCTCCTTCCACTCCCGCTAGATCATCGCAGCACTCCATCCTCACCCTCCTCCAACCCGACATTCCTCCTCCTTCCCCCACTATCCAGACTCGTCCTCAGGATTCAGATATCACTGCGGCAGAGACTGATCAATTCTTCCCCCTTCGTAACGATATCTTCCCCTGTACTGCTTGCGGCGAGATTTTCCCCAAATCCCAACTCCTCGAACAGCATCAATCCATCAAACACGCTGTATCCGAGCTTGCCGATTCCGATTCCGGCAAGAATATCGTTCGGATTATTTTCGAAACCGGATGGACGAGTAGAGAAAGAAGTCCTAAAATCCTTCGAATCTTGAAAATCCATAACAGTCAGAAGATTCTCTCCAGATTTGAAGAGTACAGAGAATCGGTGAAGGCGAAAGCGGCCAGAAACGGCGGCGTTAAGCGGCGGGATGAGCGGTGCATTGCCGACGGAAACGAGCTTTTAAGGTTTCACTGTTCGACGTTTTTATGCGATTTGGGGCAAAACGGTAATTCAAGTATTTGCGGGCAGCAATTTTGTAGTATTTGTGGGATAATTAAATCGGGATTTTCACACAAGTTGGACGGAATTTCGACGATGGCGAGTAGCTGGAGGGCACACGTGGCGATCCCAGAGGACATCGAAGAGGAATTCAAGTTTCTGAACGTGAAGCGGGCGATTTTGGTTTGTCGGGTCGTAGCGGGTCGGGTCGGGTCCGACGCCGATGAGCCGGAAAAAGAGGGCGGAGGGTTTGATTCCGTAGTCGGAAGGACTGGGAGCGGGGCCCAGACCACGTTGGATGAAGAAGAGCTTTTGGTTTTTAATCCGAGGGCTGTGCTCCCCTGCTTCGCCATTGTATACGAAATCTGA 1089 52.25 MAPIIPPSLPNKFLPLFLLLLHLGCFLLTTASPPPPPPPSCFKPRKSLSSSFSFLKRIFSSKTSTIAIDTARPPSTPARSSQHSILTLLQPDIPPPSPTIQTRPQDSDITAAETDQFFPLRNDIFPCTACGEIFPKSQLLEQHQSIKHAVSELADSDSGKNIVRIIFETGWTSRERSPKILRILKIHNSQKILSRFEEYRESVKAKAARNGGVKRRDERCIADGNELLRFHCSTFLCDLGQNGNSSICGQQFCSICGIIKSGFSHKLDGISTMASSWRAHVAIPEDIEEEFKFLNVKRAILVCRVVAGRVGSDADEPEKEGGGFDSVVGRTGSGAQTTLDEEELLVFNPRAVLPCFAIVYEI* 363
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 19675931 19677019 + Chy11G199220.1 Chy11g01342 237103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g01342 362 PANTHER NUCLEIC ACID BINDING PROTEIN 11 360 - -
Chy11g01342 362 SUPERFAMILY ADP-ribosylation 151 361 - -
Chy11g01342 362 ProSitePatterns Zinc finger C2H2 type domain signature. 127 148 IPR013087 -
Chy11g01342 362 ProSiteProfiles Zinc finger C2H2 type domain profile. 125 153 IPR013087 -
Chy11g01342 362 Gene3D - 168 362 - -
Chy11g01342 362 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 11 360 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy09g00586 Chy-Chr9:6787367 Chy11g01342 Chy-Chr11:19675931 7.69E-65 dispersed
Chy09g01109 Chy-Chr9:13358065 Chy11g01342 Chy-Chr11:19675931 2.37E-35 dispersed
Chy09g01110 Chy-Chr9:13358230 Chy11g01342 Chy-Chr11:19675931 2.47E-35 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18757 None None None None Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g01342 - - csv:101205506 655.21