Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g01383 ATGGCTACCGAGGCGACCGAAGCCACGACTAAGTTCCAAAGTCCGGATTTTCGTCCGGTACCGTCGCCTCCAGATTTCCATCCCGAGATTGTGGTATCAGCTCATGATGGTCTTCGGTTCTGGCAGTTTATGATTGCCGGTTCAATCGCTGGTTCTGCTGAACATATGGCTATGTTCCCCATCGATACCGTCAAGACCCATATGCAAGCACTCGGCTCTTGTCCAATTAAATCTGTTGGAGTTCGACAAGCCCTTCGGTCAATTTTGAAGTCAGAGGGACCTGCTGGGTTTTATCGTGGTATTGGTGCTATGGGTCTTGGAGCTGGACCAGCACATGCTGTGTATTTTACAGTTTACGAGAATTGTAAGAAGTTTTTCTCTGGTGGGGATCCTAATAATTCTCTTGCTCATGCTGCTTCTGGGGTCTGTGCAACGGTGGCGAGTGATGCTGTATTTACACCGATGGATATGGTTAAACAACGGCTGCAGTTGAGTAATAATCCCTACAGGGGAGTTTTGGATTGTATCAAAAAGGTTCTTAGAGATGAGGGGTTTAAAGCATTTTATGCATCATATAGAACTACGGTGTTGATGAATGCACCATTTACTGCTGTGCATTTTGCTACTTATGAAGCTGCAAAGAGAGGTTTGATGGAGGTTTCGCCAGAAATTGTAAATGATGAACAGTGGGTTGTTCATGCGACGGCTGGAGCTGTTGCTGGAGCTTCAGCTGCGTTTGTTACAACGCCGCTTGATGTGGTTAAGACTCAATTACAATGCCAGGGTGTATGTGGATGCGACAGATTCAAAAGTGGGTCAATCAGGGATGTAATTCGAACAATACTCAAGAAGGATGGATACAGAGGGCTTATGAGGGGATGGGTTCCAAGGATGCTCTTTCATGCCCCAGCTGCAGCTATTTGCTGGTCGACATACGAAGCGTTAAAATCCTTCTTCCACGATCTCAATGGTGGCAGCAGCCACAACGTTGAAACAAAGACAGCTTTCTTTTTGGAGCTGCAGAAAATTTTGGTAGGAGGGATTGTCTCAAAAAAAGAAAAAAGAGATGGTGACCGAATCCCTGATGGTAACTCCGATCTAGAGCAGAGCACACAAAAACACAGCCTCTTGTGA 1134 45.94 MATEATEATTKFQSPDFRPVPSPPDFHPEIVVSAHDGLRFWQFMIAGSIAGSAEHMAMFPIDTVKTHMQALGSCPIKSVGVRQALRSILKSEGPAGFYRGIGAMGLGAGPAHAVYFTVYENCKKFFSGGDPNNSLAHAASGVCATVASDAVFTPMDMVKQRLQLSNNPYRGVLDCIKKVLRDEGFKAFYASYRTTVLMNAPFTAVHFATYEAAKRGLMEVSPEIVNDEQWVVHATAGAVAGASAAFVTTPLDVVKTQLQCQGVCGCDRFKSGSIRDVIRTILKKDGYRGLMRGWVPRMLFHAPAAAICWSTYEALKSFFHDLNGGSSHNVETKTAFFLELQKILVGGIVSKKEKRDGDRIPDGNSDLEQSTQKHSLL* 378
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 20123077 20127435 + Chy11G199630.1 Chy11g01383 237144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g01383 377 ProSiteProfiles Solute carrier (Solcar) repeat profile. 228 318 IPR018108 -
Chy11g01383 377 Pfam Mitochondrial carrier protein 133 219 IPR018108 -
Chy11g01383 377 Pfam Mitochondrial carrier protein 228 320 IPR018108 -
Chy11g01383 377 Pfam Mitochondrial carrier protein 38 127 IPR018108 -
Chy11g01383 377 Gene3D Mitochondrial carrier domain 132 350 IPR023395 -
Chy11g01383 377 MobiDBLite consensus disorder prediction 354 377 - -
Chy11g01383 377 PANTHER MITOFERRIN-1-RELATED 5 325 - -
Chy11g01383 377 ProSiteProfiles Solute carrier (Solcar) repeat profile. 38 125 IPR018108 -
Chy11g01383 377 PANTHER MITOCHONDRIAL CARRIER PROTEIN, EXPRESSED 5 325 - -
Chy11g01383 377 ProSiteProfiles Solute carrier (Solcar) repeat profile. 132 216 IPR018108 -
Chy11g01383 377 PRINTS Mitochondrial carrier protein signature 147 165 IPR002067 GO:0055085
Chy11g01383 377 PRINTS Mitochondrial carrier protein signature 237 259 IPR002067 GO:0055085
Chy11g01383 377 PRINTS Mitochondrial carrier protein signature 56 70 IPR002067 GO:0055085
Chy11g01383 377 PRINTS Mitochondrial carrier protein signature 189 207 IPR002067 GO:0055085
Chy11g01383 377 SUPERFAMILY Mitochondrial carrier 36 314 IPR023395 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g01467 Chy-Chr6:15896176 Chy11g01383 Chy-Chr11:20123077 2.67E-08 dispersed
Chy08g00612 Chy-Chr8:13949037 Chy11g01383 Chy-Chr11:20123077 2.41E-152 dispersed
Chy09g00188 Chy-Chr9:1629821 Chy11g01383 Chy-Chr11:20123077 6.06E-33 dispersed
Chy10g01268 Chy-Chr10:17221566 Chy11g01383 Chy-Chr11:20123077 1.73E-07 dispersed
Chy11g00091 Chy-Chr11:1042433 Chy11g01383 Chy-Chr11:20123077 1.23E-18 dispersed
Chy11g01383 Chy-Chr11:20123077 Chy06g00134 Chy-Chr6:871321 1.52E-18 dispersed
Chy11g01383 Chy-Chr11:20123077 Chy10g00509 Chy-Chr10:11583262 1.74E-22 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g01383 K15113 - csv:101215924 661.373