Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy11g01383 | ATGGCTACCGAGGCGACCGAAGCCACGACTAAGTTCCAAAGTCCGGATTTTCGTCCGGTACCGTCGCCTCCAGATTTCCATCCCGAGATTGTGGTATCAGCTCATGATGGTCTTCGGTTCTGGCAGTTTATGATTGCCGGTTCAATCGCTGGTTCTGCTGAACATATGGCTATGTTCCCCATCGATACCGTCAAGACCCATATGCAAGCACTCGGCTCTTGTCCAATTAAATCTGTTGGAGTTCGACAAGCCCTTCGGTCAATTTTGAAGTCAGAGGGACCTGCTGGGTTTTATCGTGGTATTGGTGCTATGGGTCTTGGAGCTGGACCAGCACATGCTGTGTATTTTACAGTTTACGAGAATTGTAAGAAGTTTTTCTCTGGTGGGGATCCTAATAATTCTCTTGCTCATGCTGCTTCTGGGGTCTGTGCAACGGTGGCGAGTGATGCTGTATTTACACCGATGGATATGGTTAAACAACGGCTGCAGTTGAGTAATAATCCCTACAGGGGAGTTTTGGATTGTATCAAAAAGGTTCTTAGAGATGAGGGGTTTAAAGCATTTTATGCATCATATAGAACTACGGTGTTGATGAATGCACCATTTACTGCTGTGCATTTTGCTACTTATGAAGCTGCAAAGAGAGGTTTGATGGAGGTTTCGCCAGAAATTGTAAATGATGAACAGTGGGTTGTTCATGCGACGGCTGGAGCTGTTGCTGGAGCTTCAGCTGCGTTTGTTACAACGCCGCTTGATGTGGTTAAGACTCAATTACAATGCCAGGGTGTATGTGGATGCGACAGATTCAAAAGTGGGTCAATCAGGGATGTAATTCGAACAATACTCAAGAAGGATGGATACAGAGGGCTTATGAGGGGATGGGTTCCAAGGATGCTCTTTCATGCCCCAGCTGCAGCTATTTGCTGGTCGACATACGAAGCGTTAAAATCCTTCTTCCACGATCTCAATGGTGGCAGCAGCCACAACGTTGAAACAAAGACAGCTTTCTTTTTGGAGCTGCAGAAAATTTTGGTAGGAGGGATTGTCTCAAAAAAAGAAAAAAGAGATGGTGACCGAATCCCTGATGGTAACTCCGATCTAGAGCAGAGCACACAAAAACACAGCCTCTTGTGA | 1134 | 45.94 | MATEATEATTKFQSPDFRPVPSPPDFHPEIVVSAHDGLRFWQFMIAGSIAGSAEHMAMFPIDTVKTHMQALGSCPIKSVGVRQALRSILKSEGPAGFYRGIGAMGLGAGPAHAVYFTVYENCKKFFSGGDPNNSLAHAASGVCATVASDAVFTPMDMVKQRLQLSNNPYRGVLDCIKKVLRDEGFKAFYASYRTTVLMNAPFTAVHFATYEAAKRGLMEVSPEIVNDEQWVVHATAGAVAGASAAFVTTPLDVVKTQLQCQGVCGCDRFKSGSIRDVIRTILKKDGYRGLMRGWVPRMLFHAPAAAICWSTYEALKSFFHDLNGGSSHNVETKTAFFLELQKILVGGIVSKKEKRDGDRIPDGNSDLEQSTQKHSLL* | 378 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 20123077 | 20127435 | + | Chy11G199630.1 | Chy11g01383 | 237144 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy11g01383 | 377 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 228 | 318 | IPR018108 | - | |
Chy11g01383 | 377 | Pfam | Mitochondrial carrier protein | 133 | 219 | IPR018108 | - | |
Chy11g01383 | 377 | Pfam | Mitochondrial carrier protein | 228 | 320 | IPR018108 | - | |
Chy11g01383 | 377 | Pfam | Mitochondrial carrier protein | 38 | 127 | IPR018108 | - | |
Chy11g01383 | 377 | Gene3D | Mitochondrial carrier domain | 132 | 350 | IPR023395 | - | |
Chy11g01383 | 377 | MobiDBLite | consensus disorder prediction | 354 | 377 | - | - | |
Chy11g01383 | 377 | PANTHER | MITOFERRIN-1-RELATED | 5 | 325 | - | - | |
Chy11g01383 | 377 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 38 | 125 | IPR018108 | - | |
Chy11g01383 | 377 | PANTHER | MITOCHONDRIAL CARRIER PROTEIN, EXPRESSED | 5 | 325 | - | - | |
Chy11g01383 | 377 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 132 | 216 | IPR018108 | - | |
Chy11g01383 | 377 | PRINTS | Mitochondrial carrier protein signature | 147 | 165 | IPR002067 | GO:0055085 | |
Chy11g01383 | 377 | PRINTS | Mitochondrial carrier protein signature | 237 | 259 | IPR002067 | GO:0055085 | |
Chy11g01383 | 377 | PRINTS | Mitochondrial carrier protein signature | 56 | 70 | IPR002067 | GO:0055085 | |
Chy11g01383 | 377 | PRINTS | Mitochondrial carrier protein signature | 189 | 207 | IPR002067 | GO:0055085 | |
Chy11g01383 | 377 | SUPERFAMILY | Mitochondrial carrier | 36 | 314 | IPR023395 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy06g01467 | Chy-Chr6:15896176 | Chy11g01383 | Chy-Chr11:20123077 | 2.67E-08 | dispersed | |
Chy08g00612 | Chy-Chr8:13949037 | Chy11g01383 | Chy-Chr11:20123077 | 2.41E-152 | dispersed | |
Chy09g00188 | Chy-Chr9:1629821 | Chy11g01383 | Chy-Chr11:20123077 | 6.06E-33 | dispersed | |
Chy10g01268 | Chy-Chr10:17221566 | Chy11g01383 | Chy-Chr11:20123077 | 1.73E-07 | dispersed | |
Chy11g00091 | Chy-Chr11:1042433 | Chy11g01383 | Chy-Chr11:20123077 | 1.23E-18 | dispersed | |
Chy11g01383 | Chy-Chr11:20123077 | Chy06g00134 | Chy-Chr6:871321 | 1.52E-18 | dispersed | |
Chy11g01383 | Chy-Chr11:20123077 | Chy10g00509 | Chy-Chr10:11583262 | 1.74E-22 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy11g01383 | K15113 | - | csv:101215924 | 661.373 |