Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g01388 ATGCCGGAGATCGAACCATCTTCCCCCGACAACAATGCCCTCTTCGGCAAATACGAGCTCGGCAAGCTCCTCGGCTGCGGCGCCTTTGCCAAGGTCTTCCATGCTCGCGACCTCCGCTCCGGCCAAAGCGTCGCCGTTAAGGTTATCAACAAGAAGAAGATCTACGGCACAACCTTGATGTTCAACATTAAGCGAGAGATCACCATTATGCGCCGTCTCCGTCATCCTAACATCGTTAAACTCCATGAGGTTCTCGCTACCAAATCTAAGATCTACTTCGTTATGGAGTTCGTCAAAGGCGGCGAGCTGTTCGCTAAGATCGCCAAGGGCAGATTCAGTGAAGAACTCAGCCGGAAATTCTTCCACCAGTTGATCTCCGCCGTTGGATTCTGTCATACGCGTGGGATTTACCACCGCGATCTGAAGCCGGAGAATCTTCTCGTCGATGAGAACGGGAATCTTAAGGTCTCCGACTTTGGTCTCAGTGCGGTAACGGAACAGATCCGTGCCGATGGCCTTTTGCACACTCTTTGTGGAACTCCGGCCTATGTTGCGCCGGAGATTTTGTCCAAAAAGGGATACGACGGTGCGAAGGTTGATGTGTGGTCATGTGGTGTGATTCTTTTCGTGTTGAGCGCCGGTTACCTTCCCTTCAACGATCCGAATCTCATGGCCATGTATAAGAAGATTTATAAGGGGGAATATCGGTGCCCTAAATGGATGTCGTCGGATCTCAAGAGGTTTCTGTCGCGACTTCTAGATACGAATCCTGATTCGAGGATAACCATCGAAGAAATTCTTAATGATCCATGGTTCAGAAAAGGAGGAAATACAGAGATCAACTTCTACGATGATTACGAGATGAAATCAGAAGAGAAAGACGAATCTCCATCGACGAATTTGAATGCATTCGACATTATATCATTCTCATCTGGATTGAATCTGTCTGGTTTGTTCGATAATTCACAAAACGTTATGGATGACAGTGATCGATTCATATCGGCAGAGTCGACGGAGAAGATCGTGGGAAAAATTGAGAAATTCGGTAAGGCTGAGGATTTAAAGGTGAAGAAACAGAAAGAATTTGGATTTGAATTGGATGCAAAGAATCGTGATTTGGTAATCGGAATAGAACTTTTCCGGTTAACAGACGAATTGGTGGTGGTGGAGATGAGAAGAAGATGTGGAGATTCAGAATCGTATAAGCAAATGTTGAAGAAGAAGCTGAAAATCCATCTAACCGGCAATGACGCGTCGACTTCGACTTCCCAATAG 1275 46.43 MPEIEPSSPDNNALFGKYELGKLLGCGAFAKVFHARDLRSGQSVAVKVINKKKIYGTTLMFNIKREITIMRRLRHPNIVKLHEVLATKSKIYFVMEFVKGGELFAKIAKGRFSEELSRKFFHQLISAVGFCHTRGIYHRDLKPENLLVDENGNLKVSDFGLSAVTEQIRADGLLHTLCGTPAYVAPEILSKKGYDGAKVDVWSCGVILFVLSAGYLPFNDPNLMAMYKKIYKGEYRCPKWMSSDLKRFLSRLLDTNPDSRITIEEILNDPWFRKGGNTEINFYDDYEMKSEEKDESPSTNLNAFDIISFSSGLNLSGLFDNSQNVMDDSDRFISAESTEKIVGKIEKFGKAEDLKVKKQKEFGFELDAKNRDLVIGIELFRLTDELVVVEMRRRCGDSESYKQMLKKKLKIHLTGNDASTSTSQ* 425
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 20292311 20293585 + Chy11G199680.1 Chy11g01388 237149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g01388 424 Gene3D Transferase(Phosphotransferase) domain 1 100 278 - -
Chy11g01388 424 Gene3D Kinase associated domain 1, KA1 297 415 - -
Chy11g01388 424 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 14 7 419 - -
Chy11g01388 424 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
Chy11g01388 424 PANTHER - 7 419 - -
Chy11g01388 424 ProSiteProfiles NAF domain profile. 296 320 IPR018451 GO:0007165
Chy11g01388 424 ProSiteProfiles Protein kinase domain profile. 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy11g01388 424 CDD CIPK_C 302 413 - -
Chy11g01388 424 Gene3D Phosphorylase Kinase; domain 1 15 99 - -
Chy11g01388 424 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Chy11g01388 424 SMART serkin_6 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy11g01388 424 SUPERFAMILY Protein kinase-like (PK-like) 15 280 IPR011009 -
Chy11g01388 424 Pfam NAF domain 299 358 IPR004041 GO:0007165
Chy11g01388 424 Pfam Protein kinase domain 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g00525 Chy-Chr6:3562906 Chy11g01388 Chy-Chr11:20292311 2.11E-125 dispersed
Chy08g00585 Chy-Chr8:13537358 Chy11g01388 Chy-Chr11:20292311 0 dispersed
Chy11g01388 Chy-Chr11:20292311 Chy05g01236 Chy-Chr5:16762980 9.63E-158 dispersed
Chy11g01388 Chy-Chr11:20292311 Chy11g01389 Chy-Chr11:20296741 1.67E-144 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71572 PF00069 Pkinase 1.40E-72 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g01388 - K12761 csv:101204001 814.683