Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy11g01388 | ATGCCGGAGATCGAACCATCTTCCCCCGACAACAATGCCCTCTTCGGCAAATACGAGCTCGGCAAGCTCCTCGGCTGCGGCGCCTTTGCCAAGGTCTTCCATGCTCGCGACCTCCGCTCCGGCCAAAGCGTCGCCGTTAAGGTTATCAACAAGAAGAAGATCTACGGCACAACCTTGATGTTCAACATTAAGCGAGAGATCACCATTATGCGCCGTCTCCGTCATCCTAACATCGTTAAACTCCATGAGGTTCTCGCTACCAAATCTAAGATCTACTTCGTTATGGAGTTCGTCAAAGGCGGCGAGCTGTTCGCTAAGATCGCCAAGGGCAGATTCAGTGAAGAACTCAGCCGGAAATTCTTCCACCAGTTGATCTCCGCCGTTGGATTCTGTCATACGCGTGGGATTTACCACCGCGATCTGAAGCCGGAGAATCTTCTCGTCGATGAGAACGGGAATCTTAAGGTCTCCGACTTTGGTCTCAGTGCGGTAACGGAACAGATCCGTGCCGATGGCCTTTTGCACACTCTTTGTGGAACTCCGGCCTATGTTGCGCCGGAGATTTTGTCCAAAAAGGGATACGACGGTGCGAAGGTTGATGTGTGGTCATGTGGTGTGATTCTTTTCGTGTTGAGCGCCGGTTACCTTCCCTTCAACGATCCGAATCTCATGGCCATGTATAAGAAGATTTATAAGGGGGAATATCGGTGCCCTAAATGGATGTCGTCGGATCTCAAGAGGTTTCTGTCGCGACTTCTAGATACGAATCCTGATTCGAGGATAACCATCGAAGAAATTCTTAATGATCCATGGTTCAGAAAAGGAGGAAATACAGAGATCAACTTCTACGATGATTACGAGATGAAATCAGAAGAGAAAGACGAATCTCCATCGACGAATTTGAATGCATTCGACATTATATCATTCTCATCTGGATTGAATCTGTCTGGTTTGTTCGATAATTCACAAAACGTTATGGATGACAGTGATCGATTCATATCGGCAGAGTCGACGGAGAAGATCGTGGGAAAAATTGAGAAATTCGGTAAGGCTGAGGATTTAAAGGTGAAGAAACAGAAAGAATTTGGATTTGAATTGGATGCAAAGAATCGTGATTTGGTAATCGGAATAGAACTTTTCCGGTTAACAGACGAATTGGTGGTGGTGGAGATGAGAAGAAGATGTGGAGATTCAGAATCGTATAAGCAAATGTTGAAGAAGAAGCTGAAAATCCATCTAACCGGCAATGACGCGTCGACTTCGACTTCCCAATAG | 1275 | 46.43 | MPEIEPSSPDNNALFGKYELGKLLGCGAFAKVFHARDLRSGQSVAVKVINKKKIYGTTLMFNIKREITIMRRLRHPNIVKLHEVLATKSKIYFVMEFVKGGELFAKIAKGRFSEELSRKFFHQLISAVGFCHTRGIYHRDLKPENLLVDENGNLKVSDFGLSAVTEQIRADGLLHTLCGTPAYVAPEILSKKGYDGAKVDVWSCGVILFVLSAGYLPFNDPNLMAMYKKIYKGEYRCPKWMSSDLKRFLSRLLDTNPDSRITIEEILNDPWFRKGGNTEINFYDDYEMKSEEKDESPSTNLNAFDIISFSSGLNLSGLFDNSQNVMDDSDRFISAESTEKIVGKIEKFGKAEDLKVKKQKEFGFELDAKNRDLVIGIELFRLTDELVVVEMRRRCGDSESYKQMLKKKLKIHLTGNDASTSTSQ* | 425 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 20292311 | 20293585 | + | Chy11G199680.1 | Chy11g01388 | 237149 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy11g01388 | 424 | Gene3D | Transferase(Phosphotransferase) domain 1 | 100 | 278 | - | - | |
Chy11g01388 | 424 | Gene3D | Kinase associated domain 1, KA1 | 297 | 415 | - | - | |
Chy11g01388 | 424 | PANTHER | CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 14 | 7 | 419 | - | - | |
Chy11g01388 | 424 | ProSitePatterns | Protein kinases ATP-binding region signature. | 24 | 47 | IPR017441 | GO:0005524 | |
Chy11g01388 | 424 | PANTHER | - | 7 | 419 | - | - | |
Chy11g01388 | 424 | ProSiteProfiles | NAF domain profile. | 296 | 320 | IPR018451 | GO:0007165 | |
Chy11g01388 | 424 | ProSiteProfiles | Protein kinase domain profile. | 18 | 272 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy11g01388 | 424 | CDD | CIPK_C | 302 | 413 | - | - | |
Chy11g01388 | 424 | Gene3D | Phosphorylase Kinase; domain 1 | 15 | 99 | - | - | |
Chy11g01388 | 424 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 136 | 148 | IPR008271 | GO:0004672|GO:0006468 | |
Chy11g01388 | 424 | SMART | serkin_6 | 18 | 272 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy11g01388 | 424 | SUPERFAMILY | Protein kinase-like (PK-like) | 15 | 280 | IPR011009 | - | |
Chy11g01388 | 424 | Pfam | NAF domain | 299 | 358 | IPR004041 | GO:0007165 | |
Chy11g01388 | 424 | Pfam | Protein kinase domain | 18 | 272 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy06g00525 | Chy-Chr6:3562906 | Chy11g01388 | Chy-Chr11:20292311 | 2.11E-125 | dispersed | |
Chy08g00585 | Chy-Chr8:13537358 | Chy11g01388 | Chy-Chr11:20292311 | 0 | dispersed | |
Chy11g01388 | Chy-Chr11:20292311 | Chy05g01236 | Chy-Chr5:16762980 | 9.63E-158 | dispersed | |
Chy11g01388 | Chy-Chr11:20292311 | Chy11g01389 | Chy-Chr11:20296741 | 1.67E-144 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
71572 | PF00069 | Pkinase | 1.40E-72 | CL0016 | Chy | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy11g01388 | - | K12761 | csv:101204001 | 814.683 |