Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g01389 ATGGAAAATAAGGCGAGTGTGATGGTTCAACGATATGAATTAGGGAGATTGCTTGGCCAAGGAACGTTTGCGAAGGTATATTATGCGAGGAATACAGGAAGCAACCAAAGTGTGGCCATTAAGGTGATTGATAAGGAAAAGATTACGAAGGCTTCACTTATCAATCAGATTAAGCGTGAAATATCTATTATGAGACTTGTTAGACATCCCAATATTCTTCGTCTATATGAGGTTATGGCTACCAAGACTAAGATTTACTTTGTTTTGGAATATGCCAAAGGTGGTGAGCTCTTTGATAAGGTTGCTAAAGGGAAGCTGAAGGAGGACGTTGCTTGGAAATACTTTTATCAGTTAATTAATGCTGTTGATTTTTGTCACAGTAGGGGAGTGTATCACCGCGATATAAAGCCAGAGAACCTACTGCTTGATGAAAATGAGAATCTTAAGGTGTCTGATTTTGGTTTAAGTGCTTTAGCTGAGTCCAAGCGTCAAGACGGTTTGCTACACACGACTTGTGGTACACCAGCTTATGTTGCTCCTGAAGTCATCAATAGGAAGGGCTATGATGGTGCCAAAGCTGATATCTGGTCTTGTGGAGTAGTTTTGTTTGTCCTATTGGCAGGTTATCTCCCATTCCACAATTCGAATTTGATGGAAATGTATAGGAAGATCGGAAAAGCAGAGTATAAATGCCCTAGTTGGTTTCCTCGTGAAGTGCGGCGGCTGCTAAGCAGGATGCTTGATCCAGACCCCAATACTAGGACTTCAATAGCATTGATAAGACAAAGTTCTTGGTTCAAAAAGGGATTGAGGTCTAAGAATGCAAGAAGTGGGATAGAAAGCAATGCTGTAGCACCTGAAGATGCCACGGCTGGTTCTGGGCCATCTGAGGGAAGTGTGGCAGCAGATGGAAATCAAGAGCCAGATAGACCTCCAACTTTGAATGCTTTCAATATCATCTCCCTTTCCGCTGGGTTCAATTTATCCAGTTTATTTGAAGACAATTCAAAGAAGAAAGAAACATTGTTTACTTGTAGAAAACCAGCCTCTGTTATTCTCTCAAAACTAGAAGAAATGGCTAAACTTCTTAGGTTTCGAGTACAGAAGAAGGAAGCAGGCCTATTAAAGTTTGAGGCACTAACAGAGGGAAAAAAGGGGGCATTATCCATTGATACAGAGATCTTTGAGGTTACTCCATCTTTTTATTTAGTGGAAATGAAAAAATCAAATGGAGACACATTGGAATATCAGAAGGTATTGAAAGAAGACATTAGGCCAGCTCTAAAAGATATAGTATGGGTTTGGCGAGGAGAGCAAGAACAGCAGCAACAAAATCTTCAGCCTCAGCCTCTTCAGCCACAGGATCAAGTTCGAGATCCTGATCCAGAGCAAGATGGTGCATCACAACCGCAATAG 1416 41.24 MENKASVMVQRYELGRLLGQGTFAKVYYARNTGSNQSVAIKVIDKEKITKASLINQIKREISIMRLVRHPNILRLYEVMATKTKIYFVLEYAKGGELFDKVAKGKLKEDVAWKYFYQLINAVDFCHSRGVYHRDIKPENLLLDENENLKVSDFGLSALAESKRQDGLLHTTCGTPAYVAPEVINRKGYDGAKADIWSCGVVLFVLLAGYLPFHNSNLMEMYRKIGKAEYKCPSWFPREVRRLLSRMLDPDPNTRTSIALIRQSSWFKKGLRSKNARSGIESNAVAPEDATAGSGPSEGSVAADGNQEPDRPPTLNAFNIISLSAGFNLSSLFEDNSKKKETLFTCRKPASVILSKLEEMAKLLRFRVQKKEAGLLKFEALTEGKKGALSIDTEIFEVTPSFYLVEMKKSNGDTLEYQKVLKEDIRPALKDIVWVWRGEQEQQQQNLQPQPLQPQDQVRDPDPEQDGASQPQ* 472
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 20296741 20298156 - Chy11G199690.1 Chy11g01389 237150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g01389 471 Gene3D Kinase associated domain 1, KA1 309 434 - -
Chy11g01389 471 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 10 2 448 - -
Chy11g01389 471 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Chy11g01389 471 SUPERFAMILY Protein kinase-like (PK-like) 9 267 IPR011009 -
Chy11g01389 471 ProSiteProfiles NAF domain profile. 309 333 IPR018451 GO:0007165
Chy11g01389 471 MobiDBLite consensus disorder prediction 439 471 - -
Chy11g01389 471 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy11g01389 471 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy11g01389 471 PANTHER - 2 448 - -
Chy11g01389 471 Gene3D Transferase(Phosphotransferase) domain 1 2 295 - -
Chy11g01389 471 MobiDBLite consensus disorder prediction 277 313 - -
Chy11g01389 471 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy11g01389 471 Pfam NAF domain 311 369 IPR004041 GO:0007165
Chy11g01389 471 MobiDBLite consensus disorder prediction 439 454 - -
Chy11g01389 471 CDD CIPK_C 315 429 - -
Chy11g01389 471 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Chy11g01389 471 CDD STKc_SnRK3 11 265 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy07g00333 Chy-Chr7:2713983 Chy11g01389 Chy-Chr11:20296741 5.58E-180 dispersed
Chy08g00586 Chy-Chr8:13578622 Chy11g01389 Chy-Chr11:20296741 0 dispersed
Chy11g01389 Chy-Chr11:20296741 Chy12g00083 Chy-Chr12:837203 0 dispersed
Chy11g01388 Chy-Chr11:20292311 Chy11g01389 Chy-Chr11:20296741 1.67E-144 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71573 PF00069 Pkinase 3.90E-75 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g01389 - - csv:101206404 878.626