Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g01393 ATGGCCACCACAACCTTTTCTTCTCATAACAAAATGGCTATGGCTGTAGCATTAGTCTTATTGGCAGTACTCATGGGAAGCTCCTCAGCTCATCTTTCTCCCAACTTCTACCACAAGACTTGTCCTAACCTCCTTAGCGTAGTTCGAGCTGGTGTTCGGTCTGCTGTTGCTAAGGAAGCTCGCATGGGTGCTTCACTTCTCCGTCTCCACTTTCACGATTGTTTCGTCAATGGTTGTGATGGATCGATCCTTCTAGATGATACTCCTACGTTTTTAGGAGAGCAAACAGCAGCTCCTAACAATAGATCAGTTAGAGGGTTCAATGTGATTGCCAGTATAAAAGAGAAGATAGAAAAAATTTGTCCGGGTGTTGTCTCTTGTGCTGATATTTTGACTTTATCTGCCCGTGACTCCGTTGTAGCATTGGGAGGGCCAAGTTGGAAAGTGAAATTGGGAAGGAGAGATTCCAAAACAGCCAGCTTCTCCGATGTCACTGGTGCCATTCCTCCGCCGACCTCCACCCTGTCCACTCTCATCAATCGGTTCAATACCAAAGGCCTTTCCCCAAAGGATTTGGTTGCTTTATCTGGTGCTCACACAGTTGGGAAAGCAAGATGTTTGTTTTTCAAGAATCGTATTTACAATGAAACCAACATCGACGAGTCATTTGCTAGGAAAAGACAAAGGAATTGCCCAAGAAATGGAGGAGACGATAATCGTACTCCTTTTGACTTCAGAACCCCAAACCTTTTCGATAACAATTACTACAAGAATCTTTTGGATAAAAAGGCTTTGCTCCGCTCTGACCAGGTGCTACACGTTGGTGGATCCACCGATTCTTTGGTTGAACTTTACAGTCATGACAGTGCATCCTTTGAATCCGATTTCGTGGCAGCTATGATCAAAATGGGTGACATTGAACCACTCACTGGATTGCAAGGCGAGATCCGCAAAGTTTGTAGTCGGCCCAACTAA 975 44.82 MATTTFSSHNKMAMAVALVLLAVLMGSSSAHLSPNFYHKTCPNLLSVVRAGVRSAVAKEARMGASLLRLHFHDCFVNGCDGSILLDDTPTFLGEQTAAPNNRSVRGFNVIASIKEKIEKICPGVVSCADILTLSARDSVVALGGPSWKVKLGRRDSKTASFSDVTGAIPPPTSTLSTLINRFNTKGLSPKDLVALSGAHTVGKARCLFFKNRIYNETNIDESFARKRQRNCPRNGGDDNRTPFDFRTPNLFDNNYYKNLLDKKALLRSDQVLHVGGSTDSLVELYSHDSASFESDFVAAMIKMGDIEPLTGLQGEIRKVCSRPN* 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 20352159 20353595 - Chy11G199730.1 Chy11g01393 237154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g01393 324 CDD secretory_peroxidase 31 322 IPR033905 GO:0004601|GO:0042744
Chy11g01393 324 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy11g01393 324 PRINTS Haem peroxidase superfamily signature 63 77 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy11g01393 324 PRINTS Haem peroxidase superfamily signature 125 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy11g01393 324 PRINTS Haem peroxidase superfamily signature 191 206 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy11g01393 324 PRINTS Haem peroxidase superfamily signature 143 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy11g01393 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 191 201 IPR019793 -
Chy11g01393 324 ProSitePatterns Peroxidases active site signature. 63 74 IPR019794 GO:0004601
Chy11g01393 324 PRINTS Plant peroxidase signature 105 118 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy11g01393 324 PRINTS Plant peroxidase signature 190 202 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy11g01393 324 PRINTS Plant peroxidase signature 143 158 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy11g01393 324 PRINTS Plant peroxidase signature 41 60 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy11g01393 324 PRINTS Plant peroxidase signature 65 85 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy11g01393 324 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy11g01393 324 PRINTS Plant peroxidase signature 124 134 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy11g01393 324 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy11g01393 324 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy11g01393 324 SUPERFAMILY Heme-dependent peroxidases 32 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Chy11g01393 324 PANTHER PEROXIDASE 72-RELATED 7 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy11g01393 324 Gene3D - 35 321 - -
Chy11g01393 324 ProSiteProfiles Plant heme peroxidase family profile. 31 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy11g01393 324 Pfam Peroxidase 48 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy11g01393 324 PANTHER PEROXIDASE 7 321 - -
Chy11g01393 324 Gene3D Peroxidase, domain 2 169 303 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy10g00052 Chy-Chr10:1295853 Chy11g01393 Chy-Chr11:20352159 3.34E-132 dispersed
Chy10g00053 Chy-Chr10:1309998 Chy11g01393 Chy-Chr11:20352159 2.37E-133 dispersed
Chy11g01391 Chy-Chr11:20314094 Chy11g01393 Chy-Chr11:20352159 6.77E-170 dispersed
Chy11g01393 Chy-Chr11:20352159 Chy11g01396 Chy-Chr11:20374260 1.19E-118 dispersed
Chy11g01392 Chy-Chr11:20336341 Chy11g01393 Chy-Chr11:20352159 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g01393 K00430 - csv:101208108 607.06