Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g01396 ATGGCATCCCTTATCCACTCTCTTTTGCTTTGTTTTATTGTTTTATCAGCTTCCCATCTAAGCCATAGCCATGCACAACTAACTCCAAACTTTTACAACAACGTCTGCCCAAAGGCCTTGTCCACCATTAAATCCGTCGTGTCGAAGGCCATCAGGCGCGAGCCTCGAATGGGTGCTTCGCTATTACGTCTCCATTTTCACGATTGTTTTGTCAACGGTTGTGATGGATCGGTCTTGTTGGATGATACTGCCACCTTCACCGGAGAAAAGACTGCATTTCCTAATGCTAACTCGATTAGAGGATTTGAAGTTGTAGATCAAATTAAGACACAAGTGAATCAAGTTTGCAAAGAAAATGTCGTGTCTTGTGCTGACATCTTAGCGGTTGCTGCTCGTGACTCCGTTGCTATTCTAGGAGGGCCAAACTACAAGGTACTAGTAGGCAGAAGAGACGCAAGAACAGCAAGTGCAAACGATGCCAACAGAAATCTCCCTCCACCTTTTTTCAGCTTCAGTCAACTTCTTTCCAACTTCCAATCTCATGGCCTTGACCTCAAGGATCTCGTCCTATTGTCAGCTGGCCACACTCTAGGGCTAGCTCGGTGCACCAGTTTTCGAACTAGGATATACAATGACACGAACATTGATCCAAAATTCGCAACAACGTTGCAAAGAAACTGCCCACAGAGCGGTGGGGATGACAACTTGAAAGGCCTTGACAAGACTCCGAACTTCTTTGACAATGCCTACTTCAAGGCTTTGTTGACAAACAAGGGACTTCTGCATTCTGACCAGGAACTGTTCGGCGGTGGCAACAGCGATAGCGATGATTTGGTGAAGTATTATAGTAGATATCCATATGAATTTAGAAAGGACTTTGGTTCTTCTATGATTAAGATGGGGAATATGAATCCACTTACGGGAACTGATGGAGAAATCAGAGCTAATTGTAGGTTTGTTAATTAA 966 44.1 MASLIHSLLLCFIVLSASHLSHSHAQLTPNFYNNVCPKALSTIKSVVSKAIRREPRMGASLLRLHFHDCFVNGCDGSVLLDDTATFTGEKTAFPNANSIRGFEVVDQIKTQVNQVCKENVVSCADILAVAARDSVAILGGPNYKVLVGRRDARTASANDANRNLPPPFFSFSQLLSNFQSHGLDLKDLVLLSAGHTLGLARCTSFRTRIYNDTNIDPKFATTLQRNCPQSGGDDNLKGLDKTPNFFDNAYFKALLTNKGLLHSDQELFGGGNSDSDDLVKYYSRYPYEFRKDFGSSMIKMGNMNPLTGTDGEIRANCRFVN* 322
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 20374260 20375414 + Chy11G199760.1 Chy11g01396 237157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g01396 321 PANTHER CATIONIC PEROXIDASE 9 320 - -
Chy11g01396 321 ProSiteProfiles Plant heme peroxidase family profile. 26 321 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy11g01396 321 Pfam Peroxidase 44 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy11g01396 321 CDD secretory_peroxidase 26 320 IPR033905 GO:0004601|GO:0042744
Chy11g01396 321 Gene3D - 30 318 - -
Chy11g01396 321 PANTHER PEROXIDASE 72-RELATED 9 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy11g01396 321 SUPERFAMILY Heme-dependent peroxidases 26 321 IPR010255 GO:0004601|GO:0006979|GO:0020037
Chy11g01396 321 Gene3D Peroxidase, domain 2 165 300 - -
Chy11g01396 321 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy11g01396 321 PRINTS Haem peroxidase superfamily signature 239 254 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy11g01396 321 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy11g01396 321 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy11g01396 321 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy11g01396 321 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Chy11g01396 321 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy11g01396 321 PRINTS Plant peroxidase signature 237 252 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy11g01396 321 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy11g01396 321 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy11g01396 321 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy11g01396 321 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy11g01396 321 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy11g01396 321 PRINTS Plant peroxidase signature 253 270 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy11g01396 321 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy11g01396 321 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy11g01393 Chy-Chr11:20352159 Chy11g01396 Chy-Chr11:20374260 1.19E-118 dispersed
Chy11g01395 Chy-Chr11:20369794 Chy11g01396 Chy-Chr11:20374260 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g01396 K00430 - csv:101204979 594.734