Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g01398 ATGGAATTTTTTTTCTCCGCTACATTAGACGATCGTAGTGGCAGCGGCCGCCGAAGACAGCCGGACCTTGCGGTGGTGGCCATGGGTAATCCGCCGTTGTCTCCACCACTTTTTTCTCCTTCTTCCTTCTTCACTATTCCTCCTGGTATCAGCCCCACCCAATTACTTGATTCCCCTCCTCTTCTTCTCAACTCTTCTCGTATTCTGCTATCGCCGTCCACCGGAGATTTGAGAAAATCAACGAGTAACAATTCCGGCCACCACCAACAGAATGTCAAGCAAGAACACAACAACATTACTGAATTCTCATTTCCTCCTAATCACACCACAAAATCATCATCATCATCATCAATGTTTCAATCCTCTTCAACATCTCAGGTGCAAACTCAGGCATGGGATTTGGAATGGGAGAATGACGACCGGGGAGATCAATGGGGGATGAGGAACAGATCAGGATCTGAGGATGGGTTTAATTGGAGAAAATATGGGCAAAAAGTGGTAAAAGGAAGTGAAAATCCTAGAAGCTATTACAAATGCACATTCCCAAATTGCCCTGTTAGAAAACAAGTTGAAAGATCGTTGAATAACAATGGTCAAATTACTGAAATTGTTTACAAAAGTAAACATAACCATCCAAAACCAGACTTCACTAGAAGGTCATCTTCCTCTTTTTCTTCTTTTTCTTCATCCTCTTTTGAACCTGCGCAGCTAAAGAATTCAATACCCTCTCACTCTCTAACCACGCCGGAGAACTCTTCAATTACCGTTGGGGATGATCATTCCGACCAAGCTCATCCAAAAAGATGGAAAAGTGAGAGTAGTGAGAAGGAAGAAATGATAACAGGAGGAGGGGGGAAAACAATGAGGGAAGAAAGGATTGTAGTTCAAACAATTAGCAATGTGGATAAATTAGATGATGGTTACTGGTGGAGAAAATATGGACAGAAAGTGGTCAAGGGAAATCCAAATCCAAGAAGCTATTACAAATGCACATATCCAGGATGTGGAGTGAGGAAGCATATAGAGAGGGCATCCCATGATTTTAGAGCAGTTGTCACTACCTATGAAGGGAAGCACAACCACGATATTCCGACAGCCCGTGGCGGCAAACCAATACTTAGTAATAAGGGTAGAAATAATGAGGTTGTGTCGTCGAGCATTGGTGGTGATCCACGACTGAGTTCAGAGATTTGTAGTGCTACTAATGGATTATTGAAGTTCACAAACATGTCGTGGAAGAACAAAGAAGAGGTCGTCGATAATATATATGGGTTGTTATACTTAGGATGA 1290 42.48 MEFFFSATLDDRSGSGRRRQPDLAVVAMGNPPLSPPLFSPSSFFTIPPGISPTQLLDSPPLLLNSSRILLSPSTGDLRKSTSNNSGHHQQNVKQEHNNITEFSFPPNHTTKSSSSSSMFQSSSTSQVQTQAWDLEWENDDRGDQWGMRNRSGSEDGFNWRKYGQKVVKGSENPRSYYKCTFPNCPVRKQVERSLNNNGQITEIVYKSKHNHPKPDFTRRSSSSFSSFSSSSFEPAQLKNSIPSHSLTTPENSSITVGDDHSDQAHPKRWKSESSEKEEMITGGGGKTMREERIVVQTISNVDKLDDGYWWRKYGQKVVKGNPNPRSYYKCTYPGCGVRKHIERASHDFRAVVTTYEGKHNHDIPTARGGKPILSNKGRNNEVVSSSIGGDPRLSSEICSATNGLLKFTNMSWKNKEEVVDNIYGLLYLG* 430
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 20393355 20398752 + Chy11G199780.1 Chy11g01398 237159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g01398 429 MobiDBLite consensus disorder prediction 205 285 - -
Chy11g01398 429 MobiDBLite consensus disorder prediction 260 285 - -
Chy11g01398 429 SUPERFAMILY WRKY DNA-binding domain 151 214 IPR036576 GO:0003700|GO:0006355|GO:0043565
Chy11g01398 429 PANTHER WRKY TRANSCRIPTION FACTOR 33-RELATED 32 385 - -
Chy11g01398 429 MobiDBLite consensus disorder prediction 73 124 - -
Chy11g01398 429 Pfam WRKY DNA -binding domain 305 362 IPR003657 GO:0003700|GO:0006355|GO:0043565
Chy11g01398 429 Pfam WRKY DNA -binding domain 154 212 IPR003657 GO:0003700|GO:0006355|GO:0043565
Chy11g01398 429 ProSiteProfiles WRKY domain profile. 154 214 IPR003657 GO:0003700|GO:0006355|GO:0043565
Chy11g01398 429 MobiDBLite consensus disorder prediction 217 259 - -
Chy11g01398 429 ProSiteProfiles WRKY domain profile. 299 364 IPR003657 GO:0003700|GO:0006355|GO:0043565
Chy11g01398 429 SUPERFAMILY WRKY DNA-binding domain 296 364 IPR036576 GO:0003700|GO:0006355|GO:0043565
Chy11g01398 429 Gene3D WRKY domain 291 357 IPR036576 GO:0003700|GO:0006355|GO:0043565
Chy11g01398 429 Gene3D WRKY domain 146 215 IPR036576 GO:0003700|GO:0006355|GO:0043565
Chy11g01398 429 SMART WRKY_cls 304 363 IPR003657 GO:0003700|GO:0006355|GO:0043565
Chy11g01398 429 SMART WRKY_cls 153 213 IPR003657 GO:0003700|GO:0006355|GO:0043565
Chy11g01398 429 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 32 385 IPR044810 GO:0003700
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy10g01039 Chy-Chr10:15648725 Chy11g01398 Chy-Chr11:20393355 1.25E-65 dispersed
Chy11g01398 Chy-Chr11:20393355 Chy02g01672 Chy-Chr2:16368321 8.92E-15 dispersed
Chy11g01398 Chy-Chr11:20393355 Chy09g00217 Chy-Chr9:1819693 1.11E-74 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18762 PF03106 WRKY 4.10E-26 CL0274 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g01398 K13424 - csv:101205221 602.823