Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy11g01417 | ATGTTTAAGAATACTCGAGCTGGGAATCCCAGCAGCAACCTCCATGATTGCAAATCAGAATTTGGGTACGTTGAGACCGATCCGACATGTCGTTACGGCCGTTTCGAAGAAGTTTTGGGAAAAGGGGCCATGAAAACAGTGTACAAAGCCATTGATGAGTTTCTTGGAATAGAGGTGGCGTGGAGTCAGGTGAAACTCAACGAGGTCCTCCGATCGCCCGAGGATTTGCAACGGCTGTATTCAGAGGTTCATCTACTTAGCACGCTTAAGCACGAATCGATCATGCGATTCTACACCTCATGGATTGATGTTGATAAAAAAACCTTCAACTTCATTACTGAACTGTTTACTTCTGGAACGCTCAGAGAATATGGAAAGAAATACAGGCGAGTTGATATCAGAGCCATTAAGAGCTGGGCGAGGCAGATTCTGCAGGGACTCATTTATTTGCACGAACACGACCCTCCAATAATACACAGAGATCTGAAGTGTGATAATATCTTTGTGAATGGCCATCTTGGGCAAGTCAAGATTGGTGACTTGGGGCTTGCAGCTATACTTCATGGTTCCAGATCTGCTCACAGTGTTATAGGCACACCGGAGTTTATGGCACCAGAATTATACGAGGAGAATTACAATGAGCTAGTTGATGTCTACTCTTTTGGCATGTGTGTCCTAGAGATGCTTACTTCGGAGTACCCTTATAGCGAATGTTCTAATCCTGCACAAATTTACAAGAAAGTCACGTCGGGGAAGCTACCAGCAGCATTATACAAGATTCAAGATGTGGATGCGCAGAGATTTATTAAGAAATGCTTGGTACCAGTTTCGATGAGGGCGTCTGCGAAGGAACTCTTGGCTGATCCTTTTCTCAAAGTTGATGGAAATAGACCTTCATTGGTGGGGAGGACTCAAAACCAGAAGCCATTTCTAAATGCCAAAGAAATGGAGAATTTTCACTTGGGTGAAGGTTTAAGCAGGACCAACATGACGATCACGGGGAAGCTGAACCCCGAAGACGATACCCTCTTTCTCAGAGTTCAGACTGCCGATAAAGATGGCTCGCTTAGAAACATATACTTCCCTTTCGACATAGTTAATGACACAGCATTAGATGTGGCAATGGAGATGGTGAAAGAATTGGAGATCTCTGATTGGGAGCCGTTTGAAATTGCGGACATGATTGAAGGTGAGATATCGGCTCTGGTTCCAAACTGGAATAGAAGTGAGTTACCCAACCATAGCCTCGGCTTCAGCTATGCAGAAGAAGATGATAATGCATCTCATCATACTTTCCGCTCGGTCTCTTCGTCGTCCCAAGCAACAACTTTGGGTCTTATCTCCTCCCCAAGAACAAAGCAAAACATTTCAAATGGTTTTAGTTGGTTCCCAGATGATACGCTTGATGATAGCAGTTCACAATGCTCATCAGCGTCGGGAAAATACTCTAACTTGAATTACATCAGCAGTGACGAGTATGAGACCAGCATGGGTTCAGTCCAGATAGATCAACATAACAACATCAATAAGATTCACAATTCCTCAAGATTTTGTCCTATTGAGAACCGCAAAAGCAAGGATTTTTTGTCTCAACTTCTATACAAGCAGAGCCAATGCGCGATAGCAGGGTCGTCTCAAGGAGTTGCCTCTGGTCGCAAAGACAAGAGAGGAACAGATGGTCGTAAATTAACTAGGAACAGATCACTAGTAGATGTACATAGCCAATTGCTGCATCGTTCGTTAGTGGAGGAAGTGAATAGAAGACGGTTATTCAAGACAGTTGGAGCAGTCGAAAGCATAGGCTTTCAAGCACCTTGTGAGGTTTCTTCAAGCAAAAGGGTATCGAGTAGGCAATCAATTGGGAACCGAAGTAGTGATGTAGCAAGAACATGA | 1893 | 43.95 | MFKNTRAGNPSSNLHDCKSEFGYVETDPTCRYGRFEEVLGKGAMKTVYKAIDEFLGIEVAWSQVKLNEVLRSPEDLQRLYSEVHLLSTLKHESIMRFYTSWIDVDKKTFNFITELFTSGTLREYGKKYRRVDIRAIKSWARQILQGLIYLHEHDPPIIHRDLKCDNIFVNGHLGQVKIGDLGLAAILHGSRSAHSVIGTPEFMAPELYEENYNELVDVYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPAALYKIQDVDAQRFIKKCLVPVSMRASAKELLADPFLKVDGNRPSLVGRTQNQKPFLNAKEMENFHLGEGLSRTNMTITGKLNPEDDTLFLRVQTADKDGSLRNIYFPFDIVNDTALDVAMEMVKELEISDWEPFEIADMIEGEISALVPNWNRSELPNHSLGFSYAEEDDNASHHTFRSVSSSSQATTLGLISSPRTKQNISNGFSWFPDDTLDDSSSQCSSASGKYSNLNYISSDEYETSMGSVQIDQHNNINKIHNSSRFCPIENRKSKDFLSQLLYKQSQCAIAGSSQGVASGRKDKRGTDGRKLTRNRSLVDVHSQLLHRSLVEEVNRRRLFKTVGAVESIGFQAPCEVSSSKRVSSRQSIGNRSSDVART* | 631 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 20804445 | 20807728 | - | Chy11G199970.1 | Chy11g01417 | 237178 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy11g01417 | 630 | SMART | serkin_6 | 33 | 291 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy11g01417 | 630 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 157 | 169 | IPR008271 | GO:0004672|GO:0006468 | |
Chy11g01417 | 630 | Gene3D | Transferase(Phosphotransferase) domain 1 | 116 | 296 | - | - | |
Chy11g01417 | 630 | ProSiteProfiles | Protein kinase domain profile. | 33 | 291 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy11g01417 | 630 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED | 12 | 623 | - | - | |
Chy11g01417 | 630 | CDD | STKc_WNK | 31 | 291 | - | - | |
Chy11g01417 | 630 | SUPERFAMILY | Protein kinase-like (PK-like) | 35 | 292 | IPR011009 | - | |
Chy11g01417 | 630 | MobiDBLite | consensus disorder prediction | 611 | 630 | - | - | |
Chy11g01417 | 630 | Pfam | Protein kinase domain | 36 | 291 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy11g01417 | 630 | Gene3D | Phosphorylase Kinase; domain 1 | 17 | 114 | - | - | |
Chy11g01417 | 630 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK4-RELATED | 12 | 623 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy05g01179 | Chy-Chr5:16269268 | Chy11g01417 | Chy-Chr11:20804445 | 6.98E-168 | dispersed | |
Chy08g00580 | Chy-Chr8:13417703 | Chy11g01417 | Chy-Chr11:20804445 | 0 | dispersed | |
Chy11g01417 | Chy-Chr11:20804445 | Chy12g01235 | Chy-Chr12:17046544 | 1.95E-155 | dispersed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
71574 | PF00069 | Pkinase | 3.40E-47 | CL0016 | Chy | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy11g01417 | K08867 | - | csv:101203757 | 1212.21 |