Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g01417 ATGTTTAAGAATACTCGAGCTGGGAATCCCAGCAGCAACCTCCATGATTGCAAATCAGAATTTGGGTACGTTGAGACCGATCCGACATGTCGTTACGGCCGTTTCGAAGAAGTTTTGGGAAAAGGGGCCATGAAAACAGTGTACAAAGCCATTGATGAGTTTCTTGGAATAGAGGTGGCGTGGAGTCAGGTGAAACTCAACGAGGTCCTCCGATCGCCCGAGGATTTGCAACGGCTGTATTCAGAGGTTCATCTACTTAGCACGCTTAAGCACGAATCGATCATGCGATTCTACACCTCATGGATTGATGTTGATAAAAAAACCTTCAACTTCATTACTGAACTGTTTACTTCTGGAACGCTCAGAGAATATGGAAAGAAATACAGGCGAGTTGATATCAGAGCCATTAAGAGCTGGGCGAGGCAGATTCTGCAGGGACTCATTTATTTGCACGAACACGACCCTCCAATAATACACAGAGATCTGAAGTGTGATAATATCTTTGTGAATGGCCATCTTGGGCAAGTCAAGATTGGTGACTTGGGGCTTGCAGCTATACTTCATGGTTCCAGATCTGCTCACAGTGTTATAGGCACACCGGAGTTTATGGCACCAGAATTATACGAGGAGAATTACAATGAGCTAGTTGATGTCTACTCTTTTGGCATGTGTGTCCTAGAGATGCTTACTTCGGAGTACCCTTATAGCGAATGTTCTAATCCTGCACAAATTTACAAGAAAGTCACGTCGGGGAAGCTACCAGCAGCATTATACAAGATTCAAGATGTGGATGCGCAGAGATTTATTAAGAAATGCTTGGTACCAGTTTCGATGAGGGCGTCTGCGAAGGAACTCTTGGCTGATCCTTTTCTCAAAGTTGATGGAAATAGACCTTCATTGGTGGGGAGGACTCAAAACCAGAAGCCATTTCTAAATGCCAAAGAAATGGAGAATTTTCACTTGGGTGAAGGTTTAAGCAGGACCAACATGACGATCACGGGGAAGCTGAACCCCGAAGACGATACCCTCTTTCTCAGAGTTCAGACTGCCGATAAAGATGGCTCGCTTAGAAACATATACTTCCCTTTCGACATAGTTAATGACACAGCATTAGATGTGGCAATGGAGATGGTGAAAGAATTGGAGATCTCTGATTGGGAGCCGTTTGAAATTGCGGACATGATTGAAGGTGAGATATCGGCTCTGGTTCCAAACTGGAATAGAAGTGAGTTACCCAACCATAGCCTCGGCTTCAGCTATGCAGAAGAAGATGATAATGCATCTCATCATACTTTCCGCTCGGTCTCTTCGTCGTCCCAAGCAACAACTTTGGGTCTTATCTCCTCCCCAAGAACAAAGCAAAACATTTCAAATGGTTTTAGTTGGTTCCCAGATGATACGCTTGATGATAGCAGTTCACAATGCTCATCAGCGTCGGGAAAATACTCTAACTTGAATTACATCAGCAGTGACGAGTATGAGACCAGCATGGGTTCAGTCCAGATAGATCAACATAACAACATCAATAAGATTCACAATTCCTCAAGATTTTGTCCTATTGAGAACCGCAAAAGCAAGGATTTTTTGTCTCAACTTCTATACAAGCAGAGCCAATGCGCGATAGCAGGGTCGTCTCAAGGAGTTGCCTCTGGTCGCAAAGACAAGAGAGGAACAGATGGTCGTAAATTAACTAGGAACAGATCACTAGTAGATGTACATAGCCAATTGCTGCATCGTTCGTTAGTGGAGGAAGTGAATAGAAGACGGTTATTCAAGACAGTTGGAGCAGTCGAAAGCATAGGCTTTCAAGCACCTTGTGAGGTTTCTTCAAGCAAAAGGGTATCGAGTAGGCAATCAATTGGGAACCGAAGTAGTGATGTAGCAAGAACATGA 1893 43.95 MFKNTRAGNPSSNLHDCKSEFGYVETDPTCRYGRFEEVLGKGAMKTVYKAIDEFLGIEVAWSQVKLNEVLRSPEDLQRLYSEVHLLSTLKHESIMRFYTSWIDVDKKTFNFITELFTSGTLREYGKKYRRVDIRAIKSWARQILQGLIYLHEHDPPIIHRDLKCDNIFVNGHLGQVKIGDLGLAAILHGSRSAHSVIGTPEFMAPELYEENYNELVDVYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPAALYKIQDVDAQRFIKKCLVPVSMRASAKELLADPFLKVDGNRPSLVGRTQNQKPFLNAKEMENFHLGEGLSRTNMTITGKLNPEDDTLFLRVQTADKDGSLRNIYFPFDIVNDTALDVAMEMVKELEISDWEPFEIADMIEGEISALVPNWNRSELPNHSLGFSYAEEDDNASHHTFRSVSSSSQATTLGLISSPRTKQNISNGFSWFPDDTLDDSSSQCSSASGKYSNLNYISSDEYETSMGSVQIDQHNNINKIHNSSRFCPIENRKSKDFLSQLLYKQSQCAIAGSSQGVASGRKDKRGTDGRKLTRNRSLVDVHSQLLHRSLVEEVNRRRLFKTVGAVESIGFQAPCEVSSSKRVSSRQSIGNRSSDVART* 631
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 20804445 20807728 - Chy11G199970.1 Chy11g01417 237178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g01417 630 SMART serkin_6 33 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy11g01417 630 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Chy11g01417 630 Gene3D Transferase(Phosphotransferase) domain 1 116 296 - -
Chy11g01417 630 ProSiteProfiles Protein kinase domain profile. 33 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy11g01417 630 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 12 623 - -
Chy11g01417 630 CDD STKc_WNK 31 291 - -
Chy11g01417 630 SUPERFAMILY Protein kinase-like (PK-like) 35 292 IPR011009 -
Chy11g01417 630 MobiDBLite consensus disorder prediction 611 630 - -
Chy11g01417 630 Pfam Protein kinase domain 36 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy11g01417 630 Gene3D Phosphorylase Kinase; domain 1 17 114 - -
Chy11g01417 630 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK4-RELATED 12 623 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g01179 Chy-Chr5:16269268 Chy11g01417 Chy-Chr11:20804445 6.98E-168 dispersed
Chy08g00580 Chy-Chr8:13417703 Chy11g01417 Chy-Chr11:20804445 0 dispersed
Chy11g01417 Chy-Chr11:20804445 Chy12g01235 Chy-Chr12:17046544 1.95E-155 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71574 PF00069 Pkinase 3.40E-47 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g01417 K08867 - csv:101203757 1212.21