Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g01429 ATGGAAATGGATCGCGATTATATGACTGCTCGATTATCTGCTATATGGAATATCATTTGTCTAAAGAGAAGCTTTAAAGAGGACAGAATTCCTTGCCAAATTGAAGAGGGTCTGTTCTTAGGGTCCGTTGGAGCTGCCCATAACAAAGATCAACTGAAGAAATTGAATATCACTCACATTTTAACCGTTGCTTGTTCATTGCCACCTGCTGATCCAAACGATTTTGTTTATAAAGTAGTACGTGTCTTGGACACTAGAGATGTAGATATTAAACAGCACTTTGACGATTGTTTCAACTTTATCGTTGAGGGAAGACAATCTGGTGGAGTCTTGGTTCATTGCTTTGCTGGAATATCCAGAAGCGTAACCATTACAGTTGCCTACCTGATGAAAAAGCGAGGTATGAACCTAACACAAGCACTGGAACACGTCAAGAGTAGACGACCACAAGCAGCTCCGAACGTTGGTTTCATGGTTCAACTCAAGGACTTTGAAACAGCTCTTCAAGCTAGCAGAGTTGATGAAATGAAACTGTCAAATGTTTAA 546 40.29 MEMDRDYMTARLSAIWNIICLKRSFKEDRIPCQIEEGLFLGSVGAAHNKDQLKKLNITHILTVACSLPPADPNDFVYKVVRVLDTRDVDIKQHFDDCFNFIVEGRQSGGVLVHCFAGISRSVTITVAYLMKKRGMNLTQALEHVKSRRPQAAPNVGFMVQLKDFETALQASRVDEMKLSNV* 182
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 21051315 21052821 + Chy11G200090.1 Chy11g01429 237190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g01429 181 Pfam Dual specificity phosphatase, catalytic domain 38 166 IPR000340 GO:0008138|GO:0016311
Chy11g01429 181 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 19 170 - -
Chy11g01429 181 Gene3D Protein tyrosine phosphatase superfamily 24 178 IPR029021 -
Chy11g01429 181 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 1B 19 170 - -
Chy11g01429 181 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 92 149 IPR000387 GO:0016311|GO:0016791
Chy11g01429 181 ProSiteProfiles Dual specificity protein phosphatase domain profile. 30 170 IPR020422 GO:0006470|GO:0008138
Chy11g01429 181 SMART dsp_5 30 167 IPR020422 GO:0006470|GO:0008138
Chy11g01429 181 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 31 170 IPR029021 -
Chy11g01429 181 CDD DSP 31 163 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g01405 Chy-Chr4:20704214 Chy11g01429 Chy-Chr11:21051315 1.88E-19 dispersed
Chy10g00844 Chy-Chr10:14339455 Chy11g01429 Chy-Chr11:21051315 7.79E-20 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g01429 - - csv:101211942 353.599