Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy11g01429 | ATGGAAATGGATCGCGATTATATGACTGCTCGATTATCTGCTATATGGAATATCATTTGTCTAAAGAGAAGCTTTAAAGAGGACAGAATTCCTTGCCAAATTGAAGAGGGTCTGTTCTTAGGGTCCGTTGGAGCTGCCCATAACAAAGATCAACTGAAGAAATTGAATATCACTCACATTTTAACCGTTGCTTGTTCATTGCCACCTGCTGATCCAAACGATTTTGTTTATAAAGTAGTACGTGTCTTGGACACTAGAGATGTAGATATTAAACAGCACTTTGACGATTGTTTCAACTTTATCGTTGAGGGAAGACAATCTGGTGGAGTCTTGGTTCATTGCTTTGCTGGAATATCCAGAAGCGTAACCATTACAGTTGCCTACCTGATGAAAAAGCGAGGTATGAACCTAACACAAGCACTGGAACACGTCAAGAGTAGACGACCACAAGCAGCTCCGAACGTTGGTTTCATGGTTCAACTCAAGGACTTTGAAACAGCTCTTCAAGCTAGCAGAGTTGATGAAATGAAACTGTCAAATGTTTAA | 546 | 40.29 | MEMDRDYMTARLSAIWNIICLKRSFKEDRIPCQIEEGLFLGSVGAAHNKDQLKKLNITHILTVACSLPPADPNDFVYKVVRVLDTRDVDIKQHFDDCFNFIVEGRQSGGVLVHCFAGISRSVTITVAYLMKKRGMNLTQALEHVKSRRPQAAPNVGFMVQLKDFETALQASRVDEMKLSNV* | 182 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 21051315 | 21052821 | + | Chy11G200090.1 | Chy11g01429 | 237190 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy11g01429 | 181 | Pfam | Dual specificity phosphatase, catalytic domain | 38 | 166 | IPR000340 | GO:0008138|GO:0016311 | |
Chy11g01429 | 181 | PANTHER | DUAL SPECIFICITY PROTEIN PHOSPHATASE | 19 | 170 | - | - | |
Chy11g01429 | 181 | Gene3D | Protein tyrosine phosphatase superfamily | 24 | 178 | IPR029021 | - | |
Chy11g01429 | 181 | PANTHER | DUAL SPECIFICITY PROTEIN PHOSPHATASE 1B | 19 | 170 | - | - | |
Chy11g01429 | 181 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 92 | 149 | IPR000387 | GO:0016311|GO:0016791 | |
Chy11g01429 | 181 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 30 | 170 | IPR020422 | GO:0006470|GO:0008138 | |
Chy11g01429 | 181 | SMART | dsp_5 | 30 | 167 | IPR020422 | GO:0006470|GO:0008138 | |
Chy11g01429 | 181 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 31 | 170 | IPR029021 | - | |
Chy11g01429 | 181 | CDD | DSP | 31 | 163 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy04g01405 | Chy-Chr4:20704214 | Chy11g01429 | Chy-Chr11:21051315 | 1.88E-19 | dispersed | |
Chy10g00844 | Chy-Chr10:14339455 | Chy11g01429 | Chy-Chr11:21051315 | 7.79E-20 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy11g01429 | - | - | csv:101211942 | 353.599 |