Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g01438 ATGCAGCCCGATCAGAGAAGAAAGTCGTCCATAGATGTGGATTTCTTCACAGAATATGGTGAAGGGAGCAGGTATAGAATAGAGGAAGTAATTGGTAAAGGAAGTTATGGTGTTGTTTGCTCTGCGTATGACACTCATACTGGAGATAAAGTTGCAATTAAGAAAATCAATGATATCTTTGAGCACGTCTCTGATGCAACTCGTATTCTTCGTGAGATAAAACTTTTAAGACTATTGAGACATCCAGACATCGTGGAGATAAAGCACATCCTACTACCTCCATCTAGAAGGGAATTCAAAGACATTTATGTCGTGTTTGAGCTCATGGAATCTGATCTACATCAAGTTATCAAAGCAAATGATGATTTGACTCCTGAACATTATCAGTTCTTTCTTTACCAGCTTCTTCGAGGCTTGAAATACATACACACAGCAAATGTCTTCCACCGGGACCTAAAACCAAAAAACATCTTAGCAAATGCCGACTGCAAACTCAAGATCTGTGACTTTGGTCTAGCACGAGTTGCTTTTAATGATACTCCTACTGCTATTTTCTGGACTGACTATGTAGCAACAAGGTGGTACAGAGCTCCTGAACTCTGTGGTTCATTTTTCTCAAAGTATACACCAGCAATTGATATATGGAGCATTGGCTGCATCTTTGCGGAGCTTTTAACTGGAAAACCACTTTTCCCTGGAAAGAATGTTGTCCACCAATTAGATTTGATGACAGACTTTTTGGGAACCCCAAATGCAGAAGCCATTGCCAGGGTACGAAACGAGAAAGCTCGAAGATACTTGAGCAGTATGCGAAAGAAGAAGCCTGTTCCTTTCTCCCAGAAGTTCCCTCATGCAGATCCACTTGCACTTCGCTTGTTGGAAAGAATGTTGGCTTTTGAGCCAAAGGATCGACCTACAGCAGAGGAGGCCCTTGCAGATCCATATTTTAAAGGCTTAGCGAAGGTTGAGAGAGAGCCATCTGCTCAACCCGTTACTAAGATGGAATTTGAATTTGAAAGACGAAGGATAACCAAGGAAGATGTCAGGGAGCTTATTTACCGTGAGATTCTCGAGTACCATCCAAAAATGTTGAAGGAGTACTTAGATGGATCAGAACCTACCGGTTTCATGTATCCAAGTGCGGTTGACCATTTTAAGAAGCAATTTGCGTTCCTTGAGGAACACTATGGAAATGGTGCACCTGTAGCCCCTCCTGAAAGACAACATGCATCCTTGCCTAGGCCATGTGTTTTATACTCAGATAACATGGTGCAGAACCCAGCCCAAGTTGCGAATGACCTATCCAAATGTTCCATCAAAGAAGTTGAGAGGCCGCCAGTGGATAGGACTTGCAATATTCCTTTGGCTAGAGTTCCTATTCAAGTTCCTCAATCTATTCAAGCAGGCAATGGTGCAAGGCCTGGAAAAGTTGTTGGCTCTGTGTTGCGATACAACTGTGGAGCAGCAGCAGCGGCAGTGGCACCTGAAGTTCTTGAACAGCGGAGAATGACCAGAAACCCTTCCATTCCTCCACAGTACGCCGGTAATAACTGTTCGTATCCACGGAGAAACTCATCCTGTAAAAATGAAAGAGCTGATGAAGAAGCCATTGAAGGTCCAAATGGGTTGCAGCCTAAACCTCAGTACATAGCTAGAAAAGTTGCTGCTGCCCAAGGTGGACCAGGAAATAACTGGTACTGA 1701 43.39 MQPDQRRKSSIDVDFFTEYGEGSRYRIEEVIGKGSYGVVCSAYDTHTGDKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDLMTDFLGTPNAEAIARVRNEKARRYLSSMRKKKPVPFSQKFPHADPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHPKMLKEYLDGSEPTGFMYPSAVDHFKKQFAFLEEHYGNGAPVAPPERQHASLPRPCVLYSDNMVQNPAQVANDLSKCSIKEVERPPVDRTCNIPLARVPIQVPQSIQAGNGARPGKVVGSVLRYNCGAAAAAVAPEVLEQRRMTRNPSIPPQYAGNNCSYPRRNSSCKNERADEEAIEGPNGLQPKPQYIARKVAAAQGGPGNNWY* 567
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 21183907 21188596 + Chy11G200180.1 Chy11g01438 237199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g01438 566 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 479 - -
Chy11g01438 566 MobiDBLite consensus disorder prediction 506 525 - -
Chy11g01438 566 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy11g01438 566 Gene3D Phosphorylase Kinase; domain 1 40 361 - -
Chy11g01438 566 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy11g01438 566 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 479 - -
Chy11g01438 566 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy11g01438 566 SUPERFAMILY Protein kinase-like (PK-like) 22 320 IPR011009 -
Chy11g01438 566 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Chy11g01438 566 MobiDBLite consensus disorder prediction 506 527 - -
Chy11g01438 566 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Chy11g01438 566 CDD STKc_TDY_MAPK 24 361 - -
Chy11g01438 566 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy10g00144 Chy-Chr10:3841547 Chy11g01438 Chy-Chr11:21183907 0 dispersed
Chy11g01004 Chy-Chr11:14174479 Chy11g01438 Chy-Chr11:21183907 0 dispersed
Chy11g01438 Chy-Chr11:21183907 Chy12g01405 Chy-Chr12:18170850 0 dispersed
Chy12g00894 Chy-Chr12:14319652 Chy11g01438 Chy-Chr11:21183907 1.42E-109 dispersed
Chy11g01438 Chy-Chr11:21183907 Chy02g02318 Chy-Chr2:27194904 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71575 PF00069 Pkinase 7.20E-68 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g01438 - K04371 csv:101216364 1137.87