Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy11g01438 | ATGCAGCCCGATCAGAGAAGAAAGTCGTCCATAGATGTGGATTTCTTCACAGAATATGGTGAAGGGAGCAGGTATAGAATAGAGGAAGTAATTGGTAAAGGAAGTTATGGTGTTGTTTGCTCTGCGTATGACACTCATACTGGAGATAAAGTTGCAATTAAGAAAATCAATGATATCTTTGAGCACGTCTCTGATGCAACTCGTATTCTTCGTGAGATAAAACTTTTAAGACTATTGAGACATCCAGACATCGTGGAGATAAAGCACATCCTACTACCTCCATCTAGAAGGGAATTCAAAGACATTTATGTCGTGTTTGAGCTCATGGAATCTGATCTACATCAAGTTATCAAAGCAAATGATGATTTGACTCCTGAACATTATCAGTTCTTTCTTTACCAGCTTCTTCGAGGCTTGAAATACATACACACAGCAAATGTCTTCCACCGGGACCTAAAACCAAAAAACATCTTAGCAAATGCCGACTGCAAACTCAAGATCTGTGACTTTGGTCTAGCACGAGTTGCTTTTAATGATACTCCTACTGCTATTTTCTGGACTGACTATGTAGCAACAAGGTGGTACAGAGCTCCTGAACTCTGTGGTTCATTTTTCTCAAAGTATACACCAGCAATTGATATATGGAGCATTGGCTGCATCTTTGCGGAGCTTTTAACTGGAAAACCACTTTTCCCTGGAAAGAATGTTGTCCACCAATTAGATTTGATGACAGACTTTTTGGGAACCCCAAATGCAGAAGCCATTGCCAGGGTACGAAACGAGAAAGCTCGAAGATACTTGAGCAGTATGCGAAAGAAGAAGCCTGTTCCTTTCTCCCAGAAGTTCCCTCATGCAGATCCACTTGCACTTCGCTTGTTGGAAAGAATGTTGGCTTTTGAGCCAAAGGATCGACCTACAGCAGAGGAGGCCCTTGCAGATCCATATTTTAAAGGCTTAGCGAAGGTTGAGAGAGAGCCATCTGCTCAACCCGTTACTAAGATGGAATTTGAATTTGAAAGACGAAGGATAACCAAGGAAGATGTCAGGGAGCTTATTTACCGTGAGATTCTCGAGTACCATCCAAAAATGTTGAAGGAGTACTTAGATGGATCAGAACCTACCGGTTTCATGTATCCAAGTGCGGTTGACCATTTTAAGAAGCAATTTGCGTTCCTTGAGGAACACTATGGAAATGGTGCACCTGTAGCCCCTCCTGAAAGACAACATGCATCCTTGCCTAGGCCATGTGTTTTATACTCAGATAACATGGTGCAGAACCCAGCCCAAGTTGCGAATGACCTATCCAAATGTTCCATCAAAGAAGTTGAGAGGCCGCCAGTGGATAGGACTTGCAATATTCCTTTGGCTAGAGTTCCTATTCAAGTTCCTCAATCTATTCAAGCAGGCAATGGTGCAAGGCCTGGAAAAGTTGTTGGCTCTGTGTTGCGATACAACTGTGGAGCAGCAGCAGCGGCAGTGGCACCTGAAGTTCTTGAACAGCGGAGAATGACCAGAAACCCTTCCATTCCTCCACAGTACGCCGGTAATAACTGTTCGTATCCACGGAGAAACTCATCCTGTAAAAATGAAAGAGCTGATGAAGAAGCCATTGAAGGTCCAAATGGGTTGCAGCCTAAACCTCAGTACATAGCTAGAAAAGTTGCTGCTGCCCAAGGTGGACCAGGAAATAACTGGTACTGA | 1701 | 43.39 | MQPDQRRKSSIDVDFFTEYGEGSRYRIEEVIGKGSYGVVCSAYDTHTGDKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDLMTDFLGTPNAEAIARVRNEKARRYLSSMRKKKPVPFSQKFPHADPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHPKMLKEYLDGSEPTGFMYPSAVDHFKKQFAFLEEHYGNGAPVAPPERQHASLPRPCVLYSDNMVQNPAQVANDLSKCSIKEVERPPVDRTCNIPLARVPIQVPQSIQAGNGARPGKVVGSVLRYNCGAAAAAVAPEVLEQRRMTRNPSIPPQYAGNNCSYPRRNSSCKNERADEEAIEGPNGLQPKPQYIARKVAAAQGGPGNNWY* | 567 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 21183907 | 21188596 | + | Chy11G200180.1 | Chy11g01438 | 237199 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy11g01438 | 566 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 9 | 479 | - | - | |
Chy11g01438 | 566 | MobiDBLite | consensus disorder prediction | 506 | 525 | - | - | |
Chy11g01438 | 566 | SMART | serkin_6 | 25 | 316 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy11g01438 | 566 | Gene3D | Phosphorylase Kinase; domain 1 | 40 | 361 | - | - | |
Chy11g01438 | 566 | Pfam | Protein kinase domain | 25 | 316 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy11g01438 | 566 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 9 | 479 | - | - | |
Chy11g01438 | 566 | ProSiteProfiles | Protein kinase domain profile. | 25 | 316 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy11g01438 | 566 | SUPERFAMILY | Protein kinase-like (PK-like) | 22 | 320 | IPR011009 | - | |
Chy11g01438 | 566 | Gene3D | Transferase(Phosphotransferase) domain 1 | 111 | 339 | - | - | |
Chy11g01438 | 566 | MobiDBLite | consensus disorder prediction | 506 | 527 | - | - | |
Chy11g01438 | 566 | ProSitePatterns | MAP kinase signature. | 60 | 163 | IPR003527 | GO:0004707|GO:0005524|GO:0006468 | |
Chy11g01438 | 566 | CDD | STKc_TDY_MAPK | 24 | 361 | - | - | |
Chy11g01438 | 566 | ProSitePatterns | Protein kinases ATP-binding region signature. | 31 | 55 | IPR017441 | GO:0005524 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy10g00144 | Chy-Chr10:3841547 | Chy11g01438 | Chy-Chr11:21183907 | 0 | dispersed | |
Chy11g01004 | Chy-Chr11:14174479 | Chy11g01438 | Chy-Chr11:21183907 | 0 | dispersed | |
Chy11g01438 | Chy-Chr11:21183907 | Chy12g01405 | Chy-Chr12:18170850 | 0 | dispersed | |
Chy12g00894 | Chy-Chr12:14319652 | Chy11g01438 | Chy-Chr11:21183907 | 1.42E-109 | dispersed | |
Chy11g01438 | Chy-Chr11:21183907 | Chy02g02318 | Chy-Chr2:27194904 | 0 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
71575 | PF00069 | Pkinase | 7.20E-68 | CL0016 | Chy | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy11g01438 | - | K04371 | csv:101216364 | 1137.87 |