Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g01447 ATGGGTTGTATCCATACAAAATGTTGCTGTCGCTACCCAAAATCGTTGGTTGGAGAATCTCAAGACTTTCGGCAAGGGGTTCCTTACTGTCTTCAAGATAAGAACACTGTGATAGAGAAATCATTGGAGATGATTCCTGTTGCTTCCCACAACTATCATTTGGAATATTTGGTTCTAGCTCAGCGTGGTTACTACCCTGAATCTCCTGATAAAGAAAATCAAGACAGTTTCTGCATTAGAACAAACATTCAAGGTAACCCAAATGTTCATTTCTTTGGTGTTTTTGATGGACATGGTCAATTTGGAATGCAGTGTTCAAACTTTGTGAAAGATAGACTAATAGAAAAGCTATGTAATGATCCTACATTGTTAGATGATCCTATACAAGCTTATAATTCAGCATTTTTGTCTACAAATGATGAGTTACATACAAGTGAGATTGATGATTCCATGAGTGGAACAACTGCAATTACAGTTCTTGTTGTGGGGGATACTCTGTATGTAGCTAATGTTGGTGATTCAAGAGCTGTAATTGCAGTTAAAGAAGGGAATTATGTTCTAGCTAAGGACTTGTCAAATGATCAAACACCATTTAGAAAAGATGAGTATGAGAGAGTTAAGCTTTGTGGGGCTAGAGTTTTGAGTGTTGATCAAGTGGAAGGACTTGTAGATCCTGATATTCAGTGCTGGGGCGACGAAGAAAGTCAAGGCGGCGATCCACCTCGGCTGTGGGTTCAAAATGGATTGTATCCTGGGACTGCATTTACTAGGAGTATTGGTGATAGTACTGCTGAGAAAATCGGTGTAAATGCTGTTCCTGAGGTCTTAGTTCTTCAGCTTAATCCCAATCATCTTTTCTTTGTGGTTGCTAGTGATGGAGTTTTCGAGTTCCTTTCAAGTCAAACTGTTGTCGATATGGCATCAAGTTATGCAGATCCTCAAGATGCTTGCACTGCCATTGCTGCCGAGTCGTATAAACTATGGATGGAACATGAAAATCGAACCGATGATATAACGATCATTGTTGTTCAAATCAAAGGCTTGTCTAATTCAGGTGCTGATAATAATCCTTCCAGCAATGGGCTGGAGACTGCTTCTTCGAGAATTGATTTCTCAGATCTACCCACTGAACCGAACTCTCAGCCTGTTGCTGTAACAAATCGAAACCCAGCGATCGTGGTTCCAATGCTGAATAATCAGACATCTTTATAA 1212 39.93 MGCIHTKCCCRYPKSLVGESQDFRQGVPYCLQDKNTVIEKSLEMIPVASHNYHLEYLVLAQRGYYPESPDKENQDSFCIRTNIQGNPNVHFFGVFDGHGQFGMQCSNFVKDRLIEKLCNDPTLLDDPIQAYNSAFLSTNDELHTSEIDDSMSGTTAITVLVVGDTLYVANVGDSRAVIAVKEGNYVLAKDLSNDQTPFRKDEYERVKLCGARVLSVDQVEGLVDPDIQCWGDEESQGGDPPRLWVQNGLYPGTAFTRSIGDSTAEKIGVNAVPEVLVLQLNPNHLFFVVASDGVFEFLSSQTVVDMASSYADPQDACTAIAAESYKLWMEHENRTDDITIIVVQIKGLSNSGADNNPSSNGLETASSRIDFSDLPTEPNSQPVAVTNRNPAIVVPMLNNQTSL* 404
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 21275697 21277865 + Chy11G200270.1 Chy11g01447 237208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g01447 403 ProSiteProfiles PPM-type phosphatase domain profile. 55 345 IPR001932 -
Chy11g01447 403 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 39 360 - -
Chy11g01447 403 CDD PP2Cc 71 345 IPR001932 -
Chy11g01447 403 PANTHER PROTEIN PHOSPHATASE 2C AND CYCLIC NUCLEOTIDE-BINDING/KINASE DOMAIN-CONTAINING PROTEIN 39 360 - -
Chy11g01447 403 SMART PP2C_4 56 343 IPR001932 -
Chy11g01447 403 Pfam Protein phosphatase 2C 74 324 IPR001932 -
Chy11g01447 403 MobiDBLite consensus disorder prediction 352 384 - -
Chy11g01447 403 Gene3D - 46 347 IPR036457 -
Chy11g01447 403 ProSitePatterns PPM-type phosphatase domain signature. 91 99 IPR000222 GO:0043169
Chy11g01447 403 SUPERFAMILY PP2C-like 47 347 IPR036457 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy06g00632 Chy11g01447 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy11g01447 Chy-Chr11:21275697 Chy07g00305 Chy-Chr7:2510023 6.44E-28 dispersed
Chy02g01896 Chy-Chr2:21869986 Chy11g01447 Chy-Chr11:21275697 6.51E-140 transposed
Chy11g01447 Chy-Chr11:21275697 Chy06g00632 Chy-Chr6:4288360 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g01447 - - csv:101217134 814.683