Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g01468 ATGGCTCCTGAAATGGTGGTCGAATCGGGCCTGTCGATGGTGGATTTTGGGAAGGAGTTGGTGGCGGATCATACTTCGGTAGTTTCTTTGAACTTATTTGTAGCTCTTCTTTGCGGTTGCATTGTTATTGGCCATTTGTTAGAGGAAAATCGATGGATCAACGAGTCCATCACAGCCCTTGTCATTGGATTGTGTACCGGCATCATAATATTGGTAACAACTAGAGGGAAAAGCTCGCATTTATTTTTGTTCAATGAAGAGCTCTTTTTCATTTATCTCCTTCCGCCTATCATTTTTAATGCCGGTTTCCAAGTCAAGAAGAAGCAGTTTTTCCGCAACATCATGACCATAGTGCTTTTTGGTGCTTTTGGCACTCTCATATCGTTCTGTATTATATCATTAGGCGCTTTGCACTTCTTCCAAAAAATGAATATCGGTTCCCTTGATCTTGGAGATTATCTAGCCATTGGAGCAATTTTTTCTGCAACAGACTCTGTGTGCACCTTACAGATTCTTAATCAGGACGAGACGCCTCTTCTGTATAGCCTGGTTTTTGGGGAAGGTGTTGTAAATGATGCCACATCAGTTGTGCTATTCAATGCAATCCAAAACTTTGATGTTTCTCACATGAATTCAAGCATAGTTCTGCAATTCATTGGGAACTTTTTGTATCTGTTCCTTGCAAGTACTGTACTGGGAATTTTAGTTGGCCTCCTTAGTGCATACATAATAAAGAAGCTCTACTTTGGCAGACACTCTACTGATCGTGAAGTTGCTCTTATGATACTCATGGCGTATTTCTCTTATATGCTAGCTGAACTCTTCTATTTAAGTGCAATTCTCACTGTATTCTTTTGCGGCATTGTTATGTCTCACTATACATGGCATAACGTGACTGAAAGTTCAAGAGTCACTACAAAGCATGCTTTTGCCACCCTTTCATTTGTCGCTGAAATCTTTATCTTTCTTTACGTTGGCATGGATGCTCTAGATATCGAAAAGTGGAGATTTGTTAGCCACAGTCCTGGAAAATCAATTGGGGTGAGCTCAATACTGTTGGGATTGGTTCTGGTTGGAAGAGCAGCATTCGTTTTTCCTTTGTCCTCCTTGTCCAATCTGACCAAGAAGTCCTCGCATGAGAAACTCAACTTGGAGCAACAAGTCACTATTTGGTGGGCTGGTCTCATGCGTGGAGCTGTATCGATGGCACTTGCATATAATCAGTTCACCAGGTCAGGGCACACACATCTACCAGGCAATGCAATCATGATCACTAGTACCATCACAGTTGTTCTTTCCAGTACAGTGATATTTGGAATGATGACGAAACCACTAATAGGAATATTGCTACCCCAACCAAAATACACAATGAGCATGCTCTCTTCCGAACCTTCTTCTCCAAAATCCTTCACTATCCCACTCCTCGAAAATGACCAAAATACCCCTTCCCCTCTTGACCTCTTTCTCAGAATCCCATCCCATACCGTCCACCATTACTGGCGAAGATTTGACGACGCCTTCATGCGACCCGTCTTCGGAGGACGCGGCTTTGTGCCCTTCGTCCCAGGCTCCCCAACAGAAGACCCAACACAACAATGGCAAACTGAGGGAGCAGAGGCCATTGATGAAAATAAATCCATTCTTATTCAAACTCGAAGATAG 1662 42.78 MAPEMVVESGLSMVDFGKELVADHTSVVSLNLFVALLCGCIVIGHLLEENRWINESITALVIGLCTGIIILVTTRGKSSHLFLFNEELFFIYLLPPIIFNAGFQVKKKQFFRNIMTIVLFGAFGTLISFCIISLGALHFFQKMNIGSLDLGDYLAIGAIFSATDSVCTLQILNQDETPLLYSLVFGEGVVNDATSVVLFNAIQNFDVSHMNSSIVLQFIGNFLYLFLASTVLGILVGLLSAYIIKKLYFGRHSTDREVALMILMAYFSYMLAELFYLSAILTVFFCGIVMSHYTWHNVTESSRVTTKHAFATLSFVAEIFIFLYVGMDALDIEKWRFVSHSPGKSIGVSSILLGLVLVGRAAFVFPLSSLSNLTKKSSHEKLNLEQQVTIWWAGLMRGAVSMALAYNQFTRSGHTHLPGNAIMITSTITVVLSSTVIFGMMTKPLIGILLPQPKYTMSMLSSEPSSPKSFTIPLLENDQNTPSPLDLFLRIPSHTVHHYWRRFDDAFMRPVFGGRGFVPFVPGSPTEDPTQQWQTEGAEAIDENKSILIQTRR* 554
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 21423386 21430617 - Chy11G200480.1 Chy11g01468 237229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g01468 553 PANTHER SODIUM/HYDROGEN EXCHANGER 3 18 534 - -
Chy11g01468 553 PRINTS Na+/H+ exchanger signature 88 99 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Chy11g01468 553 PRINTS Na+/H+ exchanger signature 102 116 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Chy11g01468 553 PRINTS Na+/H+ exchanger signature 157 167 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Chy11g01468 553 PRINTS Na+/H+ exchanger signature 117 125 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Chy11g01468 553 Gene3D - 150 201 - -
Chy11g01468 553 PANTHER SODIUM/HYDROGEN EXCHANGER 18 534 IPR018422 GO:0006812|GO:0015299|GO:0016021
Chy11g01468 553 Pfam Sodium/hydrogen exchanger family 32 445 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g01126 Chy-Chr2:7962646 Chy11g01468 Chy-Chr11:21423386 0 dispersed
Chy11g01468 Chy-Chr11:21423386 Chy12g00618 Chy-Chr12:8840560 4.59E-38 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g01468 - - csv:101215493 1038.1