Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g01528 ATGTCAAACGGATTTGCCAATGCCGAAGGTGATAAAAAGAAGAAGAAGATAGCCATCATTAGTGTGTCTTCTTTAATCCTCGTAGCAATGGTTGTCGCCGTTACCGTTGGCGTCAACAATGCACCCCATGCAGAGGAGCACGGTGATGACGATCATGGCAGCGGAACCACCCCTGAAATCACATCATCCACCAAAGCTATCCAAGCCATTTGTCAACCAACGGATTACAAAGAAACCTGTGAGAAGAGTCTAGCGGCAGAAGCCGGTAACACAACAGACCCAAAAGAGCTAGTGAAAGTGGGCTTTAAAATCGCAACAAGGAGTCTGAACGAGGCTATTAAGAATTCAACCACACTTAAAGAATTAGCCAAAGACCCCAGAACCAACCAAGCCCTTCAAAATTGTCGTGAGCTACTAGAATATGCCATTGATGATTTGAACCAGTCGTTCGAAAGAATCGGCACCTTCCAAATGTCCAAACTCGATGAATTCGTCGCGGATTTAAAGATTTGGCTCAGTGGTGCACTCACGTACGAACAAACTTGCTTGGATGGTTTTGAAAACACTACAGGTGATGCTGGTGTCAGAATGCAAGAGTTTCTGAAGTCAGCTCAGCAAATGACAACCAATGGCCTTGGCATTGTTAATGAATTGTCTACCATTTTGGGTTCACTTCAGCTTCCTGGAATGAGTGGGCGACGACTTTTGGAAGATGATGATCATGAAATGCCATCATGGGTTAGCGACGGAAAGAGACGATTGATGCAGGCGGGAGCCGCTGCGATGAAACCTGATTTGGTTGTTGCTCAAGATGGGAGTGGGAAATACAAAACCATAAATGCAGCTTTAGCTGATGTGCCTTTGAAGAGTAATAAAACGTTTGTGATTCATGTGAAGGCTGGAATTTACAAAGAAATTGTTGTCATCCCCAAACATATGACTCATCTTACAATGTACGGTGATGGTCCAACCAAAACTGTCGTCACTGGAAGCTTAAACTTCATCGATGGTATTCAAACATTCAAGACCGCTACCTTCTCTGCAATTGGAGCTAACTTCTACGCTAGAGATATGGGATTCGAGAACACAGCTGGATCAGCAAAGCACCAGGCCGTGGCCCTACGAGTCCAATCCGACAGATCAATCTTCTTCAACTGCCAAATCGACGGGTACCAAGACACACTCTACGCACACGCTCATCGTCAGTTCTATAGAGATTGCACAATCAGTGGCACCATCGACTTCGTCTTCGGAAACGCTGCTACAAATTTCCAGAACTGCAAGCTAGTGGTGCGAAAGCCATTGGATAACCAACAATGCATCGTAACTGCTCACGGGCGTTTGAACAGAAAGGAACCAACGGCATTGATCTTCCAGGGCTGCCATTTCATGGGTGATCCAGCTTACTTGCCATTCAAGGCCATCAACAAGGCTTATTTGGGACGTCCATGGAAGCAATATTCAAGAACCATTATAATCGGATCAACAATAGACGACATAATTCAGCCAGAAGGATGGTTGCCATGGATGGGAGATTTTGGGTTGAACACATTGTTCTACGCGGAGGTACAAAACAAAGGAGCAGGGGCTGATGAAAGTAAGAGAGTGAAGTGGAGAGGAATTAAACATATTACGCCACAACATGCTGCGGACTTCACTCCAAGACGATTTATTGATGGCGATGCATGGATTCCTGCCAAGGGAATTCCTTACTCTTCTGGGATGATGTAA 1731 45.23 MSNGFANAEGDKKKKKIAIISVSSLILVAMVVAVTVGVNNAPHAEEHGDDDHGSGTTPEITSSTKAIQAICQPTDYKETCEKSLAAEAGNTTDPKELVKVGFKIATRSLNEAIKNSTTLKELAKDPRTNQALQNCRELLEYAIDDLNQSFERIGTFQMSKLDEFVADLKIWLSGALTYEQTCLDGFENTTGDAGVRMQEFLKSAQQMTTNGLGIVNELSTILGSLQLPGMSGRRLLEDDDHEMPSWVSDGKRRLMQAGAAAMKPDLVVAQDGSGKYKTINAALADVPLKSNKTFVIHVKAGIYKEIVVIPKHMTHLTMYGDGPTKTVVTGSLNFIDGIQTFKTATFSAIGANFYARDMGFENTAGSAKHQAVALRVQSDRSIFFNCQIDGYQDTLYAHAHRQFYRDCTISGTIDFVFGNAATNFQNCKLVVRKPLDNQQCIVTAHGRLNRKEPTALIFQGCHFMGDPAYLPFKAINKAYLGRPWKQYSRTIIIGSTIDDIIQPEGWLPWMGDFGLNTLFYAEVQNKGAGADESKRVKWRGIKHITPQHAADFTPRRFIDGDAWIPAKGIPYSSGMM* 577
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 21877871 21879689 - Chy11G201080.1 Chy11g01528 237289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g01528 576 ProSitePatterns Pectinesterase signature 1. 290 309 IPR018040 -
Chy11g01528 576 CDD PMEI-like_3 69 220 - -
Chy11g01528 576 ProSitePatterns Pectinesterase signature 2. 409 418 IPR033131 -
Chy11g01528 576 PANTHER PECTINESTERASE 19 574 - -
Chy11g01528 576 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 65 218 IPR035513 -
Chy11g01528 576 Gene3D - 259 575 IPR012334 -
Chy11g01528 576 SUPERFAMILY Pectin lyase-like 260 574 IPR011050 -
Chy11g01528 576 PANTHER PECTINESTERASE 19 574 - -
Chy11g01528 576 SMART PMEI_2 62 214 IPR006501 GO:0004857
Chy11g01528 576 Gene3D Invertase/pectin methylesterase inhibitor family protein 61 219 IPR035513 -
Chy11g01528 576 TIGRFAM PME_inhib: pectinesterase inhibitor domain 63 218 IPR006501 GO:0004857
Chy11g01528 576 MobiDBLite consensus disorder prediction 42 61 - -
Chy11g01528 576 Pfam Pectinesterase 265 561 IPR000070 GO:0030599|GO:0042545
Chy11g01528 576 Pfam Plant invertase/pectin methylesterase inhibitor 66 213 IPR006501 GO:0004857
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy06g00724 Chy11g01528 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy08g01044 Chy-Chr8:17539007 Chy11g01528 Chy-Chr11:21877871 0 dispersed
Chy09g00437 Chy-Chr9:3888532 Chy11g01528 Chy-Chr11:21877871 3.55E-160 dispersed
Chy09g00438 Chy-Chr9:3893244 Chy11g01528 Chy-Chr11:21877871 1.11E-161 dispersed
Chy11g01528 Chy-Chr11:21877871 Chy12g00390 Chy-Chr12:4598161 2.40E-137 dispersed
Chy12g01557 Chy-Chr12:19178095 Chy11g01528 Chy-Chr11:21877871 3.26E-15 transposed
Chy11g01528 Chy-Chr11:21877871 Chy06g00724 Chy-Chr6:4926168 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g01528 K01051 - csv:101221958 1112.06