Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g01557 ATGTCGCTGTCCATGAAAGCTGACGTTCAAGGAAACCTTGTTGGCTCGGAGATTCATGGCTTCCATACATTGCAAGATTTGGATGTTGAAAACATCAGGGAGGAAGCAAGTGCAAGATGGCTTCGTCCAAATGAAATCCATGCGATACTGTGTAACTACAAATATTTCACCATCCACGTCAAACCAGTGAACTTGCCCAAAAGTGGAACCATTGTATTATTTGACCGCAAGATGCTTAGGAATTTTCGCAAAGATGGACATAATTGGAAGAAAAAAAAGGATGGAAAGACAGTAAAAGAAGCACATGAACACCTAAAAGTTGGTAATGTAGAAAGGATACATGTATACTATGCCCATGGACTAGATAGCCCAACCTTTGTTCGCCGGTGTTATTGGCTCCTAGATAAGACCCTTGAACACATTGTCCTCGTTCATTACCGTGAAAAAGAGAATTCTCCATCCACATCGTTGAACTCAAATTCTGGTTCTGTCTCAAACCCATCAACTCCGTGGCTTTTATCGGAGGAACTTGATTCCAAGGCTACTCATGTTTATTCTGTTGGTGAAAATAAATTGTCAGAGCCTAGTGACACTACAACAGTCATGACTCATGAACAGCGGCTTCATGAGATCAACACACTTGAGTGGGATGACCTTCTTGTGAAGGACGAGCCTTTCAAACCTGCCATGCCTAAAGGAGACAAACTTTCATGCTTTGACCAACAGAACCAAGTCCCAATAAACGCGACCAGCAATTTGTTGGGGGAGATGTCTTCATTTAGTAATCCAGTTGAGTCAACTGGGAGGGCCAACGGCAATATCAGTTTCACCGGAAGTGCCAATCTGTTGCTAGGTGGTCAAACAAATTTGAATATAGAGAAGAGGGAATCCATTGCAATTAATTCTACGGACAATTTGTTAGATGAGAGACTGCAAAGTCAGGACAGCTTTGGGCGATGGATAAATGAAGTTATCATTGAGTCTCCTGGTTCAGTCATTGATCCTGCTATTGAACCATCCATTTCATCTGTTCACAATTCCTATCGTGATTCAACATTATATCACAGTCAAACTTTGGCTATGGAGCAAATTTTTAACATAACTGATGTCTCACCTACATGGGCCTTTTCAACAGAAAAAACAAAGATTCTAATTATTGGGTATTTTCAGAATGACTTTGTACATCTAGCAAAGTCCAACTTATTGGTTGTATGTGGTGATACCAGTGTTAATGTTGATTTTGTTCAACCTGGAGTTTATCGCTGTCTAGTACCACCACATGCACCTGGACTAGTACATTTATATGTGAGCGTAGATGGCCACAAACCTATTAGTCAAGCTCTAAATTTTGAGTATCGTGCACCAAATTTAGAAGTTCCTGTAGTTGCTTCAGAACAGAGCCAAAAGTGGGAAGAGTTTCAAATCCAGATGCGGCTTGCTCATATGTTGTTCTCTACATCCAAGATTCTGAGCATCATTTCAACTAAATTGTTGCCCACTGCCCTGCAGGAGGCTAAGAAACTTGCTGTAAAAACTGCCGACATTTCTGATAGTTGGATTTATTTGTTAAAGTCAATTACAGAAAATAGAACTCCATTTCAACAAGCAAGGGAAGGGGTTCTTGAGATCGTGCTGAGAAGCAGGTTAAGGGAATGGCTGATAGAAAGAGTTGCTGAAGGCTCAAAGAAAAGCACTGAGTTTGATGTAAATGGTCAAGGAGTAATCCATTTGTGTGCAATATTGGGATATACCTGGGCTGTACATCTATTTGACTGGGCGGGTTTGTCAATAAACTTCCGAGATAAATTTGGATGGACAGCTCTTCACTGGGCAGCTTATTATGGAAGGGAGAGAATGGTTGCCGTTCTTTTATCAGCGGGGGCAAAGCCAAACTTGGTCACTGATCCCTCATCAAAGAACCCTCTGGGATGTACAGCTGCAGATCTTGCATCTATGAATGGTTATGATGGCTTAGCTGCATATCTTTCTGAAAAGGCTTTGGTATCACACTTCAAAGAGATGAGCTTGGCTGGAAATGTCAGTGGCTCGTTGGATACTAGTAGTACAATAACTGATGCCTCTGATTGCATCACCGAGGAGCAGATGTATATGAAAGAAACATTAGCAGCTTACCGAACAGCAGCTGATGCAGCATCACGTATACAAGCTGCATTTCGTGAACATTCTTTAAAACAACGATCTGATAGAATTGAATTATCCTCCCCAGAAGATGAGGCTCGTAGTATTATTGCAGCCATGAAAATTCAACATGCCTACCGCAATTTTGAGACACGAAAAAAAATGGCAGCTGCTGCTCGTATCCAATACAGATTCCGTACTTGGAAGATCCGCAAAGACTTCCTTAATATGCGTCGTCAAACTATTAGAATTCAAGCTGCATTTAGAGGCTTCCAAGTACGGAGGCAGTATCGCAAGATTGTTTGGTCAGTAGGTGTACTTGAGAAAGCTATACTGCGCTGGCGTCTTAAGAGAAAAGGTTTCCGTGGGCTTCAAGTTGCACCTACTGAAATGGTGGAAAAGCAGGAAAGTGACGTAGAAGAGGACTTCTACCTTGTATCTCAAAAACAAGCAGAAGAGCGAGTTGAGAGAGCTGTTGTTCGTGTTCAGGCTATGTTTCGATCAAAGAAAGCACAAGAAGAGTATCGTAGGATGAGGTTAACTTGTGATGAAGCAGCGTTGGAATATGAAGTACTTTCACATCCTATGTATGGCAATGATTAA 2742 41.58 MSLSMKADVQGNLVGSEIHGFHTLQDLDVENIREEASARWLRPNEIHAILCNYKYFTIHVKPVNLPKSGTIVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNVERIHVYYAHGLDSPTFVRRCYWLLDKTLEHIVLVHYREKENSPSTSLNSNSGSVSNPSTPWLLSEELDSKATHVYSVGENKLSEPSDTTTVMTHEQRLHEINTLEWDDLLVKDEPFKPAMPKGDKLSCFDQQNQVPINATSNLLGEMSSFSNPVESTGRANGNISFTGSANLLLGGQTNLNIEKRESIAINSTDNLLDERLQSQDSFGRWINEVIIESPGSVIDPAIEPSISSVHNSYRDSTLYHSQTLAMEQIFNITDVSPTWAFSTEKTKILIIGYFQNDFVHLAKSNLLVVCGDTSVNVDFVQPGVYRCLVPPHAPGLVHLYVSVDGHKPISQALNFEYRAPNLEVPVVASEQSQKWEEFQIQMRLAHMLFSTSKILSIISTKLLPTALQEAKKLAVKTADISDSWIYLLKSITENRTPFQQAREGVLEIVLRSRLREWLIERVAEGSKKSTEFDVNGQGVIHLCAILGYTWAVHLFDWAGLSINFRDKFGWTALHWAAYYGRERMVAVLLSAGAKPNLVTDPSSKNPLGCTAADLASMNGYDGLAAYLSEKALVSHFKEMSLAGNVSGSLDTSSTITDASDCITEEQMYMKETLAAYRTAADAASRIQAAFREHSLKQRSDRIELSSPEDEARSIIAAMKIQHAYRNFETRKKMAAAARIQYRFRTWKIRKDFLNMRRQTIRIQAAFRGFQVRRQYRKIVWSVGVLEKAILRWRLKRKGFRGLQVAPTEMVEKQESDVEEDFYLVSQKQAEERVERAVVRVQAMFRSKKAQEEYRRMRLTCDEAALEYEVLSHPMYGND* 914
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 22122448 22133251 + Chy11G201370.1 Chy11g01557 237318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g01557 913 SMART CG_1_2 32 150 IPR005559 GO:0003677
Chy11g01557 913 ProSiteProfiles IQ motif profile. 714 743 IPR000048 GO:0005515
Chy11g01557 913 ProSiteProfiles Ankyrin repeat region circular profile. 603 631 - -
Chy11g01557 913 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 20 907 - -
Chy11g01557 913 Gene3D Immunoglobulins 360 456 IPR013783 -
Chy11g01557 913 ProSiteProfiles CG-1 DNA-binding domain profile. 29 155 IPR005559 GO:0003677
Chy11g01557 913 SMART iq_5 789 811 IPR000048 GO:0005515
Chy11g01557 913 SMART iq_5 867 889 IPR000048 GO:0005515
Chy11g01557 913 SMART iq_5 766 788 IPR000048 GO:0005515
Chy11g01557 913 ProSiteProfiles Ankyrin repeat profile. 603 635 IPR002110 GO:0005515
Chy11g01557 913 Pfam CG-1 domain 35 148 IPR005559 GO:0003677
Chy11g01557 913 Pfam IQ calmodulin-binding motif 792 811 IPR000048 GO:0005515
Chy11g01557 913 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 6 20 907 - -
Chy11g01557 913 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 712 817 IPR027417 -
Chy11g01557 913 SMART ANK_2a 642 671 IPR002110 GO:0005515
Chy11g01557 913 SMART ANK_2a 603 632 IPR002110 GO:0005515
Chy11g01557 913 Gene3D - 500 666 IPR036770 -
Chy11g01557 913 ProSiteProfiles IQ motif profile. 790 814 IPR000048 GO:0005515
Chy11g01557 913 ProSiteProfiles IQ motif profile. 767 794 IPR000048 GO:0005515
Chy11g01557 913 Pfam IPT/TIG domain 367 452 IPR002909 -
Chy11g01557 913 Gene3D - 768 814 - -
Chy11g01557 913 CDD IPT 367 453 - -
Chy11g01557 913 Pfam Ankyrin repeats (3 copies) 552 632 IPR002110 GO:0005515
Chy11g01557 913 SUPERFAMILY E set domains 366 453 IPR014756 -
Chy11g01557 913 Coils Coil 881 901 - -
Chy11g01557 913 ProSiteProfiles IQ motif profile. 869 897 IPR000048 GO:0005515
Chy11g01557 913 SUPERFAMILY Ankyrin repeat 565 665 IPR036770 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy08g00678 Chy-Chr8:14639238 Chy11g01557 Chy-Chr11:22122448 6.47E-132 dispersed
Chy11g01557 Chy-Chr11:22122448 Chy11g01789 Chy-Chr11:24244590 4.31E-36 dispersed
Chy11g01557 Chy-Chr11:22122448 Chy01g00551 Chy-Chr1:3948107 5.59E-07 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18772 PF03859 CG-1 5.10E-45 No_clan Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g01557 K21596 - csv:101211298 1758.42