Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g01573 ATGGGAACTCCACCAGCAGAGGAGCTTCTGAGGAAGGTCCAAGAGCTGGAGGAGGGTCAAGCGCATCTCAAGAAAGAGATGTCCAAACTTCTTCTCTCCGGAACTGCTGCCGATTCCAACTCCGACCACCAAATCCACCATCACCACCATCACCATCAACGTTCTCAATCCATATCACCTCAACGTTCTAGATTTGCTGCCACTCGTAGAAGAGGTGGCACTACCGGAGGTTTAGACGGCGCTGCTGCAACCTGGAAAAGAGGCTCTTCCTCGTTTCGACATTCTTCTCCTCTTCAGAGAGAGAGTAGAACTCGCGACCCTATGAATCCCACCGCCGCCGCCGCAGACGACGGCGGCGGCTGCTCTGGCCCCGCTGCTGTGAATTTCACCAACAAACAGTATCTAAATATCTTACAGTCACTGGGACAGCCTGTTTATATTTTTGACCTTAATTATCACATAATTTACTGGAACCGAGCTGCTGAAATTGTATATGGGTATTCTGCGGCGGAGGCTCTTGGTCAGGATGCCATTGAACTTCTAGTAGATCCTGAGGATTTCGCCGTTACAAACCATGTTATTCTTCGTGTAATGGCGGGTGAGAATTGGACTGGTCATTTACCTGTAAAGAACAAGATGGGGCAAAAATTTGTAGTTGTTGCTACCAACACTCCATTCTACGACGATGGTACATTGATTGGGATTATTTGTATATCCAGCGATTCCCGGCCATTTCAGGATTTGAAGATTCCTTTATCAGTAGGTTCTAAACAGCAGGATGCAGATTCAAGCATGGTTCGGTCACGAGTCCCAGTTTCGGTTAAGCTTGGTCTTGATCCTCAGCAGCCTCTTCAAGTGGCAATCGCTTCGAAGTTATCGAATTTGGCATCAAAAGTAAGCAACAAAGTCAAGTCCAAAATTCGAACTGGAGAAAACAGCTTGGATCGTGAAGGTGGAAGTGGAGATGGTTATCACTCTGATCATGGCCTTCCAGATGCAGTTCTTTGTGATAATCGGGATGATGCAAATTCAAGTGGAGCTAGCACGCCACGAGGAGATTCCACGGCTCATGGTGCATTTTCCCAGGTCGAAGAGAAGTTATCTGGGAGACTGGTGAGGGATTCTAGTGATGAGGGTAAGGGAAAACCTACCATCCAGAAGATTTTATCCTCAAAGGCAGAAGAATGGATTGCCAAGAAAGGCTTATCTTGGCCGTGGAAAGGGACTGAGCAGGAAGGAGTATCTGAAACAAGAGCAGCCCGTTTTGTTTGGCCTTGGGTACAAATTGATCAAGAAGCTGAACCAGCTAATCATAAGAGTTCATCTATATCTGGTAAACTAGAAATGCAGCAAAACGACGGTCATCGAGCAGTCAATAATGAGGCATCGGGATCTTGGTCATCGATCAATATTAACAGCACTAGCAGTGTAAGTAGCTGTGGGAGTACCAGTAGTAGTGCTGTCAACAAGGTTGAGTCGGACATGGACTGCTTGGATCATGAAATCTTGTGGGAAGACCTTACCATTGGGGAGCAAATAGGACAAGGTTCTTGTGGAACTGTCTATCATGCACTGTGGTATGGATCAGATGTTGCCGTTAAAGTGTTCTCCAAACAAGAGTATTCAGATGATGTGATTCTCTCCTTCAAACAGGAGGTATCCCTGATGAAAAAGCTTAGACATCCCAATATTCTTCTCTTTATGGGAGTAGTGACTTCACCTCAGCGTCTCTGCATTGTCACAGAATTCCTTCCACGTGGAAGTTTGTTTCGTTTACTACAGAGGAACACAGGCAAATTAGATTGGAGACGCCGTGTTCATATGGCTTTGGACATTGCACGAGGCATGAACTATCTTCACCATTGCAATCCACCCATTATTCACCGAGATTTGAAATCGTCGAACCTCTTAATTGATAAAAACTGGACCGTGAAGGTTGGAGATTTTGGTCTATCTCGACTTAAGCATGAGACTTATCTAACAACTAAGACCGGAAAGGGCACGCCTCAATGGATGGCGCCCGAAGTTCTTCGTAACGAGCCCTCAGATGAGAAGTCTGACATATACAGTTTTGGAGTCATATTGTGGGAGCTTGCAACTGAGAAGATCCCTTGGGAAAATCTCAATTCAATGCAGGTCATTGGTGCTGTTGGTTTCATGAACCAACGTCTTGAAATCCCCAAGGACGTGGATCCACAATGGATTTCAATTATTGAAAGCTGCTGGCACAGGGTGTAG 2238 45.89 MGTPPAEELLRKVQELEEGQAHLKKEMSKLLLSGTAADSNSDHQIHHHHHHHQRSQSISPQRSRFAATRRRGGTTGGLDGAAATWKRGSSSFRHSSPLQRESRTRDPMNPTAAAADDGGGCSGPAAVNFTNKQYLNILQSLGQPVYIFDLNYHIIYWNRAAEIVYGYSAAEALGQDAIELLVDPEDFAVTNHVILRVMAGENWTGHLPVKNKMGQKFVVVATNTPFYDDGTLIGIICISSDSRPFQDLKIPLSVGSKQQDADSSMVRSRVPVSVKLGLDPQQPLQVAIASKLSNLASKVSNKVKSKIRTGENSLDREGGSGDGYHSDHGLPDAVLCDNRDDANSSGASTPRGDSTAHGAFSQVEEKLSGRLVRDSSDEGKGKPTIQKILSSKAEEWIAKKGLSWPWKGTEQEGVSETRAARFVWPWVQIDQEAEPANHKSSSISGKLEMQQNDGHRAVNNEASGSWSSININSTSSVSSCGSTSSSAVNKVESDMDCLDHEILWEDLTIGEQIGQGSCGTVYHALWYGSDVAVKVFSKQEYSDDVILSFKQEVSLMKKLRHPNILLFMGVVTSPQRLCIVTEFLPRGSLFRLLQRNTGKLDWRRRVHMALDIARGMNYLHHCNPPIIHRDLKSSNLLIDKNWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDIYSFGVILWELATEKIPWENLNSMQVIGAVGFMNQRLEIPKDVDPQWISIIESCWHRV* 746
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 22290741 22294527 + Chy11G201530.1 Chy11g01573 237334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g01573 745 ProSiteProfiles Protein kinase domain profile. 507 745 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy11g01573 745 ProSiteProfiles PAS repeat profile. 130 201 IPR000014 -
Chy11g01573 745 MobiDBLite consensus disorder prediction 304 323 - -
Chy11g01573 745 Gene3D Transferase(Phosphotransferase) domain 1 586 745 - -
Chy11g01573 745 MobiDBLite consensus disorder prediction 341 356 - -
Chy11g01573 745 MobiDBLite consensus disorder prediction 88 106 - -
Chy11g01573 745 CDD STKc_MAP3K-like 513 744 - -
Chy11g01573 745 TIGRFAM sensory_box: PAS domain S-box protein 132 241 IPR000014 -
Chy11g01573 745 Pfam PAS fold 133 238 IPR013767 GO:0006355
Chy11g01573 745 SUPERFAMILY Protein kinase-like (PK-like) 491 743 IPR011009 -
Chy11g01573 745 SUPERFAMILY PYP-like sensor domain (PAS domain) 134 241 IPR035965 -
Chy11g01573 745 Pfam Protein tyrosine and serine/threonine kinase 507 743 IPR001245 GO:0004672|GO:0006468
Chy11g01573 745 ProSitePatterns Serine/Threonine protein kinases active-site signature. 626 638 IPR008271 GO:0004672|GO:0006468
Chy11g01573 745 MobiDBLite consensus disorder prediction 35 120 - -
Chy11g01573 745 MobiDBLite consensus disorder prediction 367 381 - -
Chy11g01573 745 Gene3D Phosphorylase Kinase; domain 1 500 584 - -
Chy11g01573 745 Coils Coil 6 26 - -
Chy11g01573 745 PANTHER SERINE/THREONINE-PROTEIN KINASE DDB_G0282963 ISOFORM X1-RELATED 37 743 - -
Chy11g01573 745 MobiDBLite consensus disorder prediction 301 385 - -
Chy11g01573 745 Gene3D PAS domain 142 244 - -
Chy11g01573 745 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 37 743 - -
Chy11g01573 745 CDD PAS 141 241 IPR000014 -
Chy11g01573 745 SMART serkin_6 507 735 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy11g01573 745 SMART pas_2 132 199 IPR000014 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy08g00913 Chy-Chr8:16570660 Chy11g01573 Chy-Chr11:22290741 2.55E-95 dispersed
Chy11g01573 Chy-Chr11:22290741 Chy12g01404 Chy-Chr12:18151135 1.47E-101 dispersed
Chy11g01573 Chy-Chr11:22290741 Chy04g01970 Chy-Chr4:25583218 6.68E-97 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71577 PF07714 PK_Tyr_Ser-Thr 4.40E-63 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g01573 - - csv:101221874 1335.09