Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy11g01573 | ATGGGAACTCCACCAGCAGAGGAGCTTCTGAGGAAGGTCCAAGAGCTGGAGGAGGGTCAAGCGCATCTCAAGAAAGAGATGTCCAAACTTCTTCTCTCCGGAACTGCTGCCGATTCCAACTCCGACCACCAAATCCACCATCACCACCATCACCATCAACGTTCTCAATCCATATCACCTCAACGTTCTAGATTTGCTGCCACTCGTAGAAGAGGTGGCACTACCGGAGGTTTAGACGGCGCTGCTGCAACCTGGAAAAGAGGCTCTTCCTCGTTTCGACATTCTTCTCCTCTTCAGAGAGAGAGTAGAACTCGCGACCCTATGAATCCCACCGCCGCCGCCGCAGACGACGGCGGCGGCTGCTCTGGCCCCGCTGCTGTGAATTTCACCAACAAACAGTATCTAAATATCTTACAGTCACTGGGACAGCCTGTTTATATTTTTGACCTTAATTATCACATAATTTACTGGAACCGAGCTGCTGAAATTGTATATGGGTATTCTGCGGCGGAGGCTCTTGGTCAGGATGCCATTGAACTTCTAGTAGATCCTGAGGATTTCGCCGTTACAAACCATGTTATTCTTCGTGTAATGGCGGGTGAGAATTGGACTGGTCATTTACCTGTAAAGAACAAGATGGGGCAAAAATTTGTAGTTGTTGCTACCAACACTCCATTCTACGACGATGGTACATTGATTGGGATTATTTGTATATCCAGCGATTCCCGGCCATTTCAGGATTTGAAGATTCCTTTATCAGTAGGTTCTAAACAGCAGGATGCAGATTCAAGCATGGTTCGGTCACGAGTCCCAGTTTCGGTTAAGCTTGGTCTTGATCCTCAGCAGCCTCTTCAAGTGGCAATCGCTTCGAAGTTATCGAATTTGGCATCAAAAGTAAGCAACAAAGTCAAGTCCAAAATTCGAACTGGAGAAAACAGCTTGGATCGTGAAGGTGGAAGTGGAGATGGTTATCACTCTGATCATGGCCTTCCAGATGCAGTTCTTTGTGATAATCGGGATGATGCAAATTCAAGTGGAGCTAGCACGCCACGAGGAGATTCCACGGCTCATGGTGCATTTTCCCAGGTCGAAGAGAAGTTATCTGGGAGACTGGTGAGGGATTCTAGTGATGAGGGTAAGGGAAAACCTACCATCCAGAAGATTTTATCCTCAAAGGCAGAAGAATGGATTGCCAAGAAAGGCTTATCTTGGCCGTGGAAAGGGACTGAGCAGGAAGGAGTATCTGAAACAAGAGCAGCCCGTTTTGTTTGGCCTTGGGTACAAATTGATCAAGAAGCTGAACCAGCTAATCATAAGAGTTCATCTATATCTGGTAAACTAGAAATGCAGCAAAACGACGGTCATCGAGCAGTCAATAATGAGGCATCGGGATCTTGGTCATCGATCAATATTAACAGCACTAGCAGTGTAAGTAGCTGTGGGAGTACCAGTAGTAGTGCTGTCAACAAGGTTGAGTCGGACATGGACTGCTTGGATCATGAAATCTTGTGGGAAGACCTTACCATTGGGGAGCAAATAGGACAAGGTTCTTGTGGAACTGTCTATCATGCACTGTGGTATGGATCAGATGTTGCCGTTAAAGTGTTCTCCAAACAAGAGTATTCAGATGATGTGATTCTCTCCTTCAAACAGGAGGTATCCCTGATGAAAAAGCTTAGACATCCCAATATTCTTCTCTTTATGGGAGTAGTGACTTCACCTCAGCGTCTCTGCATTGTCACAGAATTCCTTCCACGTGGAAGTTTGTTTCGTTTACTACAGAGGAACACAGGCAAATTAGATTGGAGACGCCGTGTTCATATGGCTTTGGACATTGCACGAGGCATGAACTATCTTCACCATTGCAATCCACCCATTATTCACCGAGATTTGAAATCGTCGAACCTCTTAATTGATAAAAACTGGACCGTGAAGGTTGGAGATTTTGGTCTATCTCGACTTAAGCATGAGACTTATCTAACAACTAAGACCGGAAAGGGCACGCCTCAATGGATGGCGCCCGAAGTTCTTCGTAACGAGCCCTCAGATGAGAAGTCTGACATATACAGTTTTGGAGTCATATTGTGGGAGCTTGCAACTGAGAAGATCCCTTGGGAAAATCTCAATTCAATGCAGGTCATTGGTGCTGTTGGTTTCATGAACCAACGTCTTGAAATCCCCAAGGACGTGGATCCACAATGGATTTCAATTATTGAAAGCTGCTGGCACAGGGTGTAG | 2238 | 45.89 | MGTPPAEELLRKVQELEEGQAHLKKEMSKLLLSGTAADSNSDHQIHHHHHHHQRSQSISPQRSRFAATRRRGGTTGGLDGAAATWKRGSSSFRHSSPLQRESRTRDPMNPTAAAADDGGGCSGPAAVNFTNKQYLNILQSLGQPVYIFDLNYHIIYWNRAAEIVYGYSAAEALGQDAIELLVDPEDFAVTNHVILRVMAGENWTGHLPVKNKMGQKFVVVATNTPFYDDGTLIGIICISSDSRPFQDLKIPLSVGSKQQDADSSMVRSRVPVSVKLGLDPQQPLQVAIASKLSNLASKVSNKVKSKIRTGENSLDREGGSGDGYHSDHGLPDAVLCDNRDDANSSGASTPRGDSTAHGAFSQVEEKLSGRLVRDSSDEGKGKPTIQKILSSKAEEWIAKKGLSWPWKGTEQEGVSETRAARFVWPWVQIDQEAEPANHKSSSISGKLEMQQNDGHRAVNNEASGSWSSININSTSSVSSCGSTSSSAVNKVESDMDCLDHEILWEDLTIGEQIGQGSCGTVYHALWYGSDVAVKVFSKQEYSDDVILSFKQEVSLMKKLRHPNILLFMGVVTSPQRLCIVTEFLPRGSLFRLLQRNTGKLDWRRRVHMALDIARGMNYLHHCNPPIIHRDLKSSNLLIDKNWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDIYSFGVILWELATEKIPWENLNSMQVIGAVGFMNQRLEIPKDVDPQWISIIESCWHRV* | 746 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 22290741 | 22294527 | + | Chy11G201530.1 | Chy11g01573 | 237334 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy11g01573 | 745 | ProSiteProfiles | Protein kinase domain profile. | 507 | 745 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy11g01573 | 745 | ProSiteProfiles | PAS repeat profile. | 130 | 201 | IPR000014 | - | |
Chy11g01573 | 745 | MobiDBLite | consensus disorder prediction | 304 | 323 | - | - | |
Chy11g01573 | 745 | Gene3D | Transferase(Phosphotransferase) domain 1 | 586 | 745 | - | - | |
Chy11g01573 | 745 | MobiDBLite | consensus disorder prediction | 341 | 356 | - | - | |
Chy11g01573 | 745 | MobiDBLite | consensus disorder prediction | 88 | 106 | - | - | |
Chy11g01573 | 745 | CDD | STKc_MAP3K-like | 513 | 744 | - | - | |
Chy11g01573 | 745 | TIGRFAM | sensory_box: PAS domain S-box protein | 132 | 241 | IPR000014 | - | |
Chy11g01573 | 745 | Pfam | PAS fold | 133 | 238 | IPR013767 | GO:0006355 | |
Chy11g01573 | 745 | SUPERFAMILY | Protein kinase-like (PK-like) | 491 | 743 | IPR011009 | - | |
Chy11g01573 | 745 | SUPERFAMILY | PYP-like sensor domain (PAS domain) | 134 | 241 | IPR035965 | - | |
Chy11g01573 | 745 | Pfam | Protein tyrosine and serine/threonine kinase | 507 | 743 | IPR001245 | GO:0004672|GO:0006468 | |
Chy11g01573 | 745 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 626 | 638 | IPR008271 | GO:0004672|GO:0006468 | |
Chy11g01573 | 745 | MobiDBLite | consensus disorder prediction | 35 | 120 | - | - | |
Chy11g01573 | 745 | MobiDBLite | consensus disorder prediction | 367 | 381 | - | - | |
Chy11g01573 | 745 | Gene3D | Phosphorylase Kinase; domain 1 | 500 | 584 | - | - | |
Chy11g01573 | 745 | Coils | Coil | 6 | 26 | - | - | |
Chy11g01573 | 745 | PANTHER | SERINE/THREONINE-PROTEIN KINASE DDB_G0282963 ISOFORM X1-RELATED | 37 | 743 | - | - | |
Chy11g01573 | 745 | MobiDBLite | consensus disorder prediction | 301 | 385 | - | - | |
Chy11g01573 | 745 | Gene3D | PAS domain | 142 | 244 | - | - | |
Chy11g01573 | 745 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 37 | 743 | - | - | |
Chy11g01573 | 745 | CDD | PAS | 141 | 241 | IPR000014 | - | |
Chy11g01573 | 745 | SMART | serkin_6 | 507 | 735 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy11g01573 | 745 | SMART | pas_2 | 132 | 199 | IPR000014 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy08g00913 | Chy-Chr8:16570660 | Chy11g01573 | Chy-Chr11:22290741 | 2.55E-95 | dispersed | |
Chy11g01573 | Chy-Chr11:22290741 | Chy12g01404 | Chy-Chr12:18151135 | 1.47E-101 | dispersed | |
Chy11g01573 | Chy-Chr11:22290741 | Chy04g01970 | Chy-Chr4:25583218 | 6.68E-97 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
71577 | PF07714 | PK_Tyr_Ser-Thr | 4.40E-63 | CL0016 | Chy | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy11g01573 | - | - | csv:101221874 | 1335.09 |